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vidboda/bed2intervals.awk

Last active April 6, 2018 15:01
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awk to convert bed file to position intervals file
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bed2intervals.awk
BEGIN {OFS=""} {if ($1 !~ /track/) {print $1,":",$2+1,"-",$3}}
#one-liner:
#awk 'BEGIN {OFS=""} {if ($1 !~ /track/) {print $1,":",$2+1,"-",$3}}' file.bed > file.list
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