vjrj

#!/bin/bash
# Dependencies: java 8 and curl

DEST=.

if [[ ! -f $DEST/jwk-gen.jar ]]; then
    curl -s -o $DEST/jwk-gen.jar --location --remote-header-name --remote-name https://raw.githubusercontent.com/apereo/cas/master/etc/jwk-gen.jar
fi

function gen {

vjrj

# Use with 
# include /etc/nginx/conf.d/cors;
# in your locations

# Allow static fonts 
location ~* .(eot|otf|svg|ttf|woff|woff2)$ {
  add_header Access-Control-Allow-Origin *;
}

set $cors '';

vjrj

#!/bin/bash
# Put this, for instance in /usr/loca/bin/ and adapt to your LA node
#
# Used in conjuntion with this other script:
# https://gist.github.com/vjrj/2b077a2bb786227a517ca03f7e30cf4c
# 
# Depends on jq (apt install jq) 
#

USER=XXX

vjrj

#!/bin/bash
#
# Adapt urls and put this in your /usr/local/bin (for instance) and call it with your biocache-store like:
#   check-mappings-in-ocurrences.sh dr100 dr102
#
# Depends on jq (apt install jq) and https://pypi.org/project/xq/
#

drs=$1

vjrj

#!/bin/bash
# Usage "check-dr-linked-record-consumers.sh dr225 dr226"
#

ERRORS=0
DEBUG=1

drs=$1

for dr in $(echo $drs | tr "," "\n")

vjrj

#
# A grc configuration we use to add colors to biocache-store logs 
# used in conjuntion with AnsiColor plugin:
# http://wiki.jenkins-ci.org/display/JENKINS/AnsiColor+Plugin
# 
# Usage: 
#   apt install grc
# put this file in /etc/grc.conf (for instance)
# 
# Pipe bioache commands to grcat:

vjrj

//
// DEPRECATED
// Use: https://github.com/living-atlases/gbif-taxonomy-for-la
//
const parse = require("csv-parse/lib/es5");
const transform = require('stream-transform');
const fs = require('fs');

var readStream = fs.createReadStream("./gbif-backbone/Taxon.tsv.orig");

vjrj

#!/bin/bash
# Sample usage:

# $ la-components-table-row.sh "Elurikkus - Estonia" https://elurikkus.ee/en https://elurikkus.ee/en/collections/ https://elurikkus.ee/generic-hub/ https://elurikkus.ee/biocache-service/ https://elurikkus.ee/bie-hub/ https://elurikkus.ee/bie-index/ https://elurikkus.ee/lists/ https://elurikkus.ee/regions/
# to get:
# | [Elurikkus - Estonia](https://elurikkus.ee/en) | [✓](https://elurikkus.ee/en/collections/) | [✓](https://elurikkus.ee/generic-hub/) | [✓](https://elurikkus.ee/biocache-service/) | [✓](https://elurikkus.ee/bie-hub/) | [✓](https://elurikkus.ee/bie-index/) | [✓](https://elurikkus.ee/lists/) | [✓](https://elurikkus.ee/regions/) |

# Order:
# | NodeName | Collectory | Biocache | BiocacheService | Species | SpeciesService | SpeciesLists | Regions | Images | Spatial | CAS | Sightings | Alerts | Volunteer |

vjrj

#!/usr/bin/env python
# -*- coding: utf-8 -*-

import sys
import csv
import urllib2
import re
import json
from bs4 import BeautifulSoup

vjrj

#!/bin/bash
#
# A small unofficial script to check data mappings in LA collectory
#
# Installation:
# 
#   - Copy this script in /usr/local/bin of a collectory host (for instance)
#   - Put 'docopts' in /usr/local/bin (See INSTALL of: https://github.com/docopt/docopts), or just
#     download https://github.com/Sylvain303/docopts/releases/download/v0.6.3-alpha1/docopts and put
#     in /usr/local/bin of a collectory