Build fails on Ubuntu 12.04.03

gistfile1.txt

$ gcc --version
gcc (Ubuntu/Linaro 4.6.3-1ubuntu5) 4.6.3

$ autoconf --version
autoconf (GNU Autoconf) 2.68

$ make -version
GNU Make 3.81

$ mvn -v
Apache Maven 3.1.1 (0728685237757ffbf44136acec0402957f723d9a; 2013-09-17 17:22:22+0200)
Maven home: /opt/local/apache-maven
Java version: 1.6.0_27, vendor: Sun Microsystems Inc.
Java home: /usr/lib/jvm/java-6-openjdk-amd64/jre
Default locale: en_US, platform encoding: UTF-8
OS name: "linux", version: "3.2.0-41-generic", arch: "amd64", family: "unix"


Compile error:

- making private noit-objs/LuaJIT/src/lib_init.o
- linking noitd
noit-objs/eventer/eventer_impl.o: In function `eventer_gethrtime':
/home/vrou/work/reconnoiter-riemann/src/eventer/eventer_impl.c:376: undefined reference to `clock_gettime'
collect2: ld returned 1 exit status
make[1]: *** [noitd] Error 1
rm noit_events_rest.o
make[1]: Leaving directory `/home/vrou/work/reconnoiter-riemann/src'
make: *** [all] Error 2

Configure output:

$ ./configure
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for inline... inline
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking whether byte ordering is bigendian... no
checking how to run the C preprocessor... gcc -E
checking for ranlib... ranlib
checking for a BSD-compatible install... /usr/bin/install -c
checking whether ln -s works... yes
checking for ar... /usr/bin/ar
checking for perl... /usr/bin/perl
checking for xsltproc... /usr/bin/xsltproc
checking for xmllint... /usr/bin/xmllint
checking for mvn... /opt/local/apache-maven/bin/mvn
checking for java... /usr/bin/java
checking for java... (cached) /usr/bin/java
checking for javac... /usr/bin/javac
checking for javac... (cached) /usr/bin/javac
checking for jar... /usr/bin/jar
checking for jar... (cached) /usr/bin/jar
checking for nroff... /usr/bin/nroff
checking for ctfconvert... no
checking for ctfmerge... no
checking enable build/install of the Java IEP and Jezebel bits... yes
checking size of char... 1
checking size of short int... 2
checking size of int... 4
checking size of long int... 8
checking size of long long int... 8
checking size of void *... 8
checking for umem_cache_create in -lumem... no
checking for compress2 in -lz... yes
checking for sem_init in -lrt... no
checking for sem_wait in -lposix4... no
checking for pthread_create in -lpthread... yes
checking for protobuf_c_message_get_packed_size in -lprotobuf-c... yes
checking for uuid_generate... no
configure: WARNING: uuid_generate not available
checking for library containing uuid_generate... -luuid
checking for uuid_unparse_lower... yes
checking for openpty in -lutil... yes
checking for tputs in -ltermcap... yes
checking for clear in -lcurses... yes
checking for pcre_compile in -lpcre... yes
checking for ERR_load_CRYPTO_strings in -lcrypto... yes
checking for SSL_library_init in -lssl... yes
checking for PQconnectdb in -lpq... yes
checking libpq includes... checking gcrypt.h usability... yes
checking gcrypt.h presence... yes
checking for gcrypt.h... yes
checking mysql.h usability... no
checking mysql.h presence... no
checking for mysql.h... no
checking mysql/mysql.h usability... yes
checking mysql/mysql.h presence... yes
checking for mysql/mysql.h... yes
checking for mysql_real_connect... yes
checking net-snmp/net-snmp-config.h usability... yes
checking net-snmp/net-snmp-config.h presence... yes
checking for net-snmp/net-snmp-config.h... yes
checking for snmp_sess_open in -lnetsnmp... yes
checking for fq_client_init in -lfq... no
checking for libssh2_session_init_ex in -lssh2... yes
checking libxml2 cflags... -I/usr/include/libxml2
checking libxml2 libs... -L/usr/lib/x86_64-linux-gnu -lxml2
checking for xmlParseDocument... yes
checking libxslt cflags... -I/usr/include/libxml2
checking libxslt libs... -L/usr/lib/x86_64-linux-gnu -lxslt -lxml2
checking for xsltParseStylesheetDoc... yes
checking apr-1-config for needed for stomp support... 
checking libapr cflags...   -pthread  -DLINUX=2 -D_REENTRANT -D_GNU_SOURCE -I/usr/include/apr-1.0 
checking libapr libs...  -L/usr/lib -lapr-1  
checking whether sem_init works... yes
checking for strftime... yes
checking for ssetugid... no
checking for strlcpy... no
checking for strnstrn... no
checking for openpty... yes
checking for inet_pton... yes
checking for inet_ntop... yes
checking for getopt... yes
checking for poll... yes
checking for vasprintf... yes
checking for strlcat... no
checking sys/file.h usability... yes
checking sys/file.h presence... yes
checking for sys/file.h... yes
checking for sys/types.h... (cached) yes
checking dirent.h usability... yes
checking dirent.h presence... yes
checking for dirent.h... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking semaphore.h usability... yes
checking semaphore.h presence... yes
checking for semaphore.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking ctype.h usability... yes
checking ctype.h presence... yes
checking for ctype.h... yes
checking for unistd.h... (cached) yes
checking time.h usability... yes
checking time.h presence... yes
checking for time.h... yes
checking pty.h usability... yes
checking pty.h presence... yes
checking for pty.h... yes
checking for sys/stat.h... (cached) yes
checking sys/event.h usability... no
checking sys/event.h presence... no
checking for sys/event.h... no
checking libkern/OSAtomic.h usability... no
checking libkern/OSAtomic.h presence... no
checking for libkern/OSAtomic.h... no
checking termio.h usability... yes
checking termio.h presence... yes
checking for termio.h... yes
checking termios.h usability... yes
checking termios.h presence... yes
checking for termios.h... yes
checking curses.h usability... yes
checking curses.h presence... yes
checking for curses.h... yes
checking sys/cdefs.h usability... yes
checking sys/cdefs.h presence... yes
checking for sys/cdefs.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking netinet/in_systm.h usability... yes
checking netinet/in_systm.h presence... yes
checking for netinet/in_systm.h... yes
checking sys/ioctl_compat.h usability... no
checking sys/ioctl_compat.h presence... no
checking for sys/ioctl_compat.h... no
checking sys/filio.h usability... no
checking sys/filio.h presence... no
checking for sys/filio.h... no
checking util.h usability... no
checking util.h presence... no
checking for util.h... no
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/mman.h usability... yes
checking sys/mman.h presence... yes
checking for sys/mman.h... yes
checking sys/ioctl.h usability... yes
checking sys/ioctl.h presence... yes
checking for sys/ioctl.h... yes
checking stropts.h usability... yes
checking stropts.h presence... yes
checking for stropts.h... yes
checking sys/stream.h usability... no
checking sys/stream.h presence... no
checking for sys/stream.h... no
checking alloca.h usability... yes
checking alloca.h presence... yes
checking for alloca.h... yes
checking sys/wait.h usability... yes
checking sys/wait.h presence... yes
checking for sys/wait.h... yes
checking bsd/libutil.h usability... no
checking bsd/libutil.h presence... no
checking for bsd/libutil.h... no
checking libutil.h usability... no
checking libutil.h presence... no
checking for libutil.h... no
checking for term.h... yes
checking whether openpty is declared... yes
checking for getpwnam_r... yes
checking for POSIX.1c getpwnam_r... yes
checking for getgrnam_r... yes
checking for POSIX.1c getgrnam_r... yes
checking for tputs() function final argument type... not char
checking for tgoto() function final argument type... not char
checking for epoll support... yes
checking for kqueue support... no
checking for Solaris ports support... no
checking for posix_readdir_r... yes
checking for sig_t type... yes
checking for u_int type... yes
checking for intXX_t types... yes
checking for int64_t type... yes
checking for u_intXX_t types... yes
checking for u_int64_t types... yes
checking for socklen_t... yes
checking for size_t... yes
checking for ssize_t... yes
checking Resolving libexec path...... /usr/local/libexec/noit
checking Resolving javalibdir path...... /usr/local/java
checking Resolving sysconfdir path...... /usr/local/etc
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/Makefile.objs
config.status: creating src/eventer/Makefile
config.status: creating src/jlog/Makefile
config.status: creating src/jlog/perl/Makefile.PL
config.status: creating src/lua/Makefile
config.status: creating src/udns/Makefile
config.status: creating src/json-lib/Makefile
config.status: creating src/yajl-lib/Makefile
config.status: creating src/man/Makefile
config.status: creating src/modules/Makefile
config.status: creating src/modules-lua/Makefile
config.status: creating src/utils/Makefile
config.status: creating src/noitedit/Makefile
config.status: creating src/java/Makefile
config.status: creating src/java/reconnoiter-riemann/run-iep.sh
config.status: creating src/java/jezebel
config.status: creating src/scripts/noit-config
config.status: creating sql/Makefile
config.status: creating test/Makefile
config.status: creating src/noit_config.h
config.status: src/noit_config.h is unchanged
config.status: creating src/jlog/jlog_config.h
config.status: src/jlog/jlog_config.h is unchanged


=== Compile-time Configuration ===
  Lua Implementation: LuaJIT

  == optional noit modules ==
  MySQL module:       yes
  SNMP module:        yes
  SSH2 module:        yes

  == optional stratcon modules ==
  STOMP iep driver:   yes
  FQ iep driver:      no

  == Java bits ==
  Jezebel:            yes
  Reconnoiter:        yes
  Riemann IEP:        yes