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Slurm job arrays
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#!/bin/bash | |
# Illustrating the use of job arrays in SLURM | |
# use the command: sbatch --array=1-100 job_array_demo.sh | |
# Partition for the job: | |
#SBATCH -p main | |
# Multithreaded (SMP) job: must run on one node | |
#SBATCH --nodes=1 | |
# The name of the job: | |
#SBATCH --job-name="job_arrays" | |
# The project ID which this job should run under: | |
# This may or may not be needed | |
#SBATCH --account="999999" | |
# Maximum number of tasks/CPU cores used by the job: | |
#SBATCH --ntasks=1 | |
#SBATCH --cpus-per-task=1 | |
# The amount of memory in megabytes per process in the job: | |
#SBATCH --mem=200 | |
# Send yourself an email when the job: | |
# aborts abnormally (fails) | |
#SBATCH --mail-type=FAIL | |
# begins | |
#SBATCH --mail-type=BEGIN | |
# ends successfully | |
#SBATCH --mail-type=END | |
# Use this email address: | |
#SBATCH --mail-user=some.email@your_institutions.com | |
# The maximum running time of the job in days-hours:mins:sec | |
#SBATCH --time=0-0:00:05 | |
# check that the script is launched with sbatch | |
if [ "x$SLURM_JOB_ID" == "x" ]; then | |
echo "You need to submit your job to the queuing system with sbatch" | |
exit 1 | |
fi | |
# Get the line corresponding the to the task number | |
# from a file called words | |
WORD=$(sed -n "${SLURM_ARRAY_TASK_ID}p" words) | |
# Do something with it information | |
# Some available env variables include: | |
# $SLURM_ARRAY_TASK_ID -- index of the current task | |
# $SLURM_ARRAY_JOB_ID --- the job id in the slurm queue | |
# $SLURM_ARRAY_TASK_MAX --- the largest index possible for task | |
# $SLUM_ARRAY_TASK_MIN --- the smalles index possible for task | |
echo "This is task number ${SLURM_ARRAY_TASK_ID} of ${SLURM_ARRAY_TASK_MAX} from job ${SLURM_ARRAY_JOB_ID}. The dictionary word is ${WORD}." |
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1080 | |
10-point | |
10th | |
11-point | |
12-point | |
16-point | |
18-point | |
1st | |
2 | |
20-point | |
2,4,5-t | |
2,4-d | |
2D | |
2nd | |
30-30 | |
3-D | |
3-d | |
3D | |
3M | |
3rd | |
48-point | |
4-D | |
4GL | |
4H | |
4th | |
5-point | |
5-T | |
5th | |
6-point | |
6th | |
7-point | |
7th | |
8-point | |
8th | |
9-point | |
9th | |
-a | |
A | |
A. | |
a | |
a' | |
a- | |
a. | |
A-1 | |
A1 | |
a1 | |
A4 | |
A5 | |
AA | |
aa | |
A.A.A. | |
AAA | |
aaa | |
AAAA | |
AAAAAA | |
AAAL | |
AAAS | |
Aaberg | |
Aachen | |
AAE | |
AAEE | |
AAF | |
AAG | |
aah | |
aahed | |
aahing | |
aahs | |
AAII | |
aal | |
Aalborg | |
Aalesund | |
aalii | |
aaliis | |
aals | |
Aalst | |
Aalto | |
AAM | |
aam | |
AAMSI | |
Aandahl | |
A-and-R | |
Aani | |
AAO | |
AAP | |
AAPSS | |
Aaqbiye | |
Aar | |
Aara | |
Aarau | |
AARC | |
aardvark | |
aardvarks | |
aardwolf | |
aardwolves | |
Aaren | |
Aargau | |
aargh | |
Aarhus | |
Aarika | |
Aaron | |
aaron | |
Aaronic | |
aaronic | |
Aaronical | |
Aaronite | |
Aaronitic | |
Aaron's-beard | |
Aaronsburg | |
Aaronson | |
AARP | |
aarrgh | |
aarrghh | |
Aaru | |
AAS | |
aas | |
A'asia | |
aasvogel | |
aasvogels | |
AAU | |
AAUP | |
AAUW | |
AAVSO | |
AAX | |
A-axes | |
A-axis | |
A.B. | |
AB | |
Ab | |
ab | |
ab- | |
A.B.A. | |
ABA | |
Aba | |
aba | |
Ababa | |
Ababdeh | |
Ababua | |
abac | |
abaca | |
abacas | |
abacate | |
abacaxi | |
abacay | |
abaci | |
abacinate | |
abacination | |
abacisci | |
abaciscus | |
abacist | |
aback | |
abacli | |
Abaco | |
abacot | |
abacterial | |
abactinal | |
abactinally | |
abaction | |
abactor | |
abaculi | |
abaculus | |
abacus | |
abacuses | |
Abad | |
abada | |
Abadan | |
Abaddon | |
abaddon | |
abadejo | |
abadengo | |
abadia | |
Abadite | |
abaff | |
abaft | |
Abagael | |
Abagail | |
Abagtha | |
Abailard | |
abaisance | |
abaised | |
abaiser | |
abaisse | |
abaissed | |
abaka | |
Abakan | |
abakas | |
Abakumov | |
abalation | |
abalienate | |
abalienated | |
abalienating | |
abalienation | |
abalone | |
abalones | |
Abama | |
abamp | |
abampere | |
abamperes | |
abamps | |
Abana | |
aband |
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