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Created Apr 12, 2019

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using FSLDIR as /build/fsl/src/fsl
Making project libgdc
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot gdc_samp1 gdc_samp2 gdc_pie_samp
/build/fsl/src/fsl/extras/src/libgdc
Building dependency file depend.mk
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/usr/include -I/usr/include/libpng1.6 -I/usr/include -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o gifencode.o gifencode.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/usr/include -I/usr/include/libpng1.6 -I/usr/include -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o price_conv.o price_conv.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/usr/include -I/usr/include/libpng1.6 -I/usr/include -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o gdc.o gdc.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/usr/include -I/usr/include/libpng1.6 -I/usr/include -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o gdc_pie.o gdc_pie.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/usr/include -I/usr/include/libpng1.6 -I/usr/include -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o gdchart.o gdchart.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/usr/include -I/usr/include/libpng1.6 -I/usr/include -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o array_alloc.o array_alloc.c
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
gifencode.c: In function ‘gdImageCreateFromGif’:
gifencode.c:866:12: warning: variable ‘AspectRatio’ set but not used [-Wunused-but-set-variable]
int AspectRatio;
^~~~~~~~~~~
gifencode.c:865:12: warning: variable ‘Background’ set but not used [-Wunused-but-set-variable]
int Background;
^~~~~~~~~~
gifencode.c:864:12: warning: variable ‘ColorResolution’ set but not used [-Wunused-but-set-variable]
int ColorResolution;
^~~~~~~~~~~~~~~
At top level:
gifencode.c:783:13: warning: ‘accum’ defined but not used [-Wunused-variable]
static char accum[ 256 ];
^~~~~
gifencode.c:775:1: warning: ‘char_init’ defined but not used [-Wunused-function]
char_init(void)
^~~~~~~~~
gifencode.c:57:13: warning: ‘char_out’ defined but not used [-Wunused-function]
static void char_out (int c)
^~~~~~~~
gdc.c: In function ‘out_err’:
gdc.c:270:8: warning: variable ‘bgclr’ set but not used [-Wunused-but-set-variable]
int bgclr;
^~~~~
gdc_pie.c: In function ‘GDC_out_pie’:
gdc_pie.c:55:29: warning: implicit declaration of function ‘rint’; did you mean ‘printf’? [-Wimplicit-function-declaration]
#define TO_INT_DEG(o) (int)rint( (double)((o)/(2.0*M_PI)*360.0) )
^~~~
gdc_pie.c:443:10: note: in expansion of macro ‘TO_INT_DEG’
TO_INT_DEG(slice_angle[1][i])+270, TO_INT_DEG(slice_angle[2][i])+270,
^~~~~~~~~~
gdc_pie.c:141:9: warning: variable ‘pscl’ set but not used [-Wunused-but-set-variable]
float pscl;
^~~~
gdc_pie.c:129:8: warning: variable ‘BGColor’ set but not used [-Wunused-but-set-variable]
int BGColor,
^~~~~~~
ar -r libgdc.a gifencode.o price_conv.o gdc.o gdc_pie.o gdchart.o array_alloc.o
ar: creating libgdc.a
make[1]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
make[2]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
make[2]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
make[3]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
make[3]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
Installing stable header files
install -p -m 0664 array_alloc.h /build/fsl/src/fsl/extras/include/libgdc/
install -p -m 0664 gdc.h /build/fsl/src/fsl/extras/include/libgdc/
install -p -m 0664 gdchart.h /build/fsl/src/fsl/extras/include/libgdc/
install -p -m 0664 gdcpie.h /build/fsl/src/fsl/extras/include/libgdc/
install -p -m 0664 gifencode.h /build/fsl/src/fsl/extras/include/libgdc/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
Installing stable library archives
install -p -m 0664 libgdc.a /build/fsl/src/fsl/extras/lib
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/doc/libgdc/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/refdoc/libgdc/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libgdc'
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
make[3]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
make[2]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
make[1]: Leaving directory '/build/fsl/src/fsl/extras/src/libgdc'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot gdc_samp1 gdc_samp2 gdc_pie_samp
-------------------------
Successfully made libgdc
Making project libprob
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
/build/fsl/src/fsl/extras/src/libprob
Building dependency file depend.mk
make: Nothing to be done for 'all'.
make[1]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
make[2]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
make[2]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
make[3]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
make[3]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
Installing stable header files
install -p -m 0664 libprob.h /build/fsl/src/fsl/extras/include/libprob/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
Installing stable library archives
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/doc/libprob/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/refdoc/libprob/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libprob'
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
make[3]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
make[2]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
make[1]: Leaving directory '/build/fsl/src/fsl/extras/src/libprob'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
-------------------------
Successfully made libprob
Making project libcprob
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
/build/fsl/src/fsl/extras/src/libcprob
Building dependency file depend.mk
make: Nothing to be done for 'all'.
make[1]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
make[2]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
make[2]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
make[3]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
make[3]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
Installing stable header files
install -p -m 0664 libcprob.h /build/fsl/src/fsl/extras/include/libcprob/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
Installing stable library archives
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/doc/libcprob/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/refdoc/libcprob/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/libcprob'
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
make[3]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
make[2]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
make[1]: Leaving directory '/build/fsl/src/fsl/extras/src/libcprob'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
-------------------------
Successfully made libcprob
Making project cprob
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
/build/fsl/src/fsl/extras/src/cprob
Building dependency file depend.mk
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o bdtr.o bdtr.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o btdtr.o btdtr.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o chdtr.o chdtr.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o drand.o drand.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o expx2.o expx2.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o fdtr.o fdtr.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o gamma.o gamma.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o gdtr.o gdtr.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o igam.o igam.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o igami.o igami.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o incbet.o incbet.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o incbi.o incbi.c
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o mtherr.o mtherr.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o nbdtr.o nbdtr.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o ndtr.o ndtr.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o ndtri.o ndtri.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o pdtr.o pdtr.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o stdtr.o stdtr.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o unity.o unity.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o polevl.o polevl.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o const.o const.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -std=gnu99 -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o xmath.o xmath.c
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
stdtr.c: In function ‘stdtr’:
stdtr.c:180:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if( t < 0 )
^~
stdtr.c:183:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
p = 0.5 + 0.5 * p;
^
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
ar rv libprob.a bdtr.o btdtr.o chdtr.o drand.o expx2.o fdtr.o gamma.o gdtr.o igam.o igami.o incbet.o incbi.o mtherr.o nbdtr.o ndtr.o ndtri.o pdtr.o stdtr.o unity.o polevl.o const.o xmath.o
ar: creating libprob.a
a - bdtr.o
a - btdtr.o
a - chdtr.o
a - drand.o
a - expx2.o
a - fdtr.o
a - gamma.o
a - gdtr.o
a - igam.o
a - igami.o
a - incbet.o
a - incbi.o
a - mtherr.o
a - nbdtr.o
a - ndtr.o
a - ndtri.o
a - pdtr.o
a - stdtr.o
a - unity.o
a - polevl.o
a - const.o
a - xmath.o
ranlib libprob.a
rm -f libcprob.a
ln -s libprob.a libcprob.a
make[1]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
make[2]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
make[2]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
make[3]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
make[3]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
Installing stable header files
install -p -m 0664 cprob.h /build/fsl/src/fsl/extras/include/cprob/
install -p -m 0664 mconf.h /build/fsl/src/fsl/extras/include/cprob/
install -p -m 0664 xmath.h /build/fsl/src/fsl/extras/include/cprob/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
Installing stable library archives
install -p -m 0664 libcprob.a /build/fsl/src/fsl/extras/lib
install -p -m 0664 libprob.a /build/fsl/src/fsl/extras/lib
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/doc/cprob/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/refdoc/cprob/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/cprob'
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
make[3]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
make[2]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
make[1]: Leaving directory '/build/fsl/src/fsl/extras/src/cprob'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
-------------------------
Successfully made cprob
Making project newran
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot tryrand
/build/fsl/src/fsl/extras/src/newran
Building dependency file depend.mk
/bin/cp hist.cpp hist.cxx
/bin/cp newran.cpp newran.cxx
/bin/cp extreal.cpp extreal.cxx
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -O2 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -c hist.cxx
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -O2 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -c newran.cxx
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -O2 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -c extreal.cxx
/bin/cp myexcept.cpp myexcept.cxx
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -O2 -I/usr/include/boost -I. -I/build/fsl/src/fsl/extras/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -c myexcept.cxx
/bin/rm -f extreal.cxx
newran.cxx: In member function ‘NEWRAN::RepeatedRandom& NEWRAN::Random::operator()(int)’:
newran.cxx:652:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:652:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::NegatedRandom& NEWRAN::operator-(NEWRAN::Random&)’:
newran.cxx:658:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:658:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::ShiftedRandom& NEWRAN::operator+(NEWRAN::Random&, RBD_COMMON::Real)’:
newran.cxx:664:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:664:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::ShiftedRandom& NEWRAN::operator-(NEWRAN::Random&, RBD_COMMON::Real)’:
newran.cxx:670:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:670:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::ScaledRandom& NEWRAN::operator*(NEWRAN::Random&, RBD_COMMON::Real)’:
newran.cxx:676:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:676:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::ShiftedRandom& NEWRAN::operator+(RBD_COMMON::Real, NEWRAN::Random&)’:
newran.cxx:682:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:682:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::ReverseShiftedRandom& NEWRAN::operator-(RBD_COMMON::Real, NEWRAN::Random&)’:
newran.cxx:688:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:688:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::ScaledRandom& NEWRAN::operator*(RBD_COMMON::Real, NEWRAN::Random&)’:
newran.cxx:694:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:694:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::ScaledRandom& NEWRAN::operator/(NEWRAN::Random&, RBD_COMMON::Real)’:
newran.cxx:700:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:700:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::ReciprocalRandom& NEWRAN::operator/(RBD_COMMON::Real, NEWRAN::Random&)’:
newran.cxx:706:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:706:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::AddedRandom& NEWRAN::operator+(NEWRAN::Random&, NEWRAN::Random&)’:
newran.cxx:712:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:712:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::MultipliedRandom& NEWRAN::operator*(NEWRAN::Random&, NEWRAN::Random&)’:
newran.cxx:718:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:718:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::SubtractedRandom& NEWRAN::operator-(NEWRAN::Random&, NEWRAN::Random&)’:
newran.cxx:724:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:724:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::DividedRandom& NEWRAN::operator/(NEWRAN::Random&, NEWRAN::Random&)’:
newran.cxx:730:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:730:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::AddedSelectedRandom& NEWRAN::operator+(NEWRAN::SelectedRandom&, NEWRAN::SelectedRandom&)’:
newran.cxx:834:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:834:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::AddedSelectedRandom& NEWRAN::operator+(NEWRAN::AddedSelectedRandom&, NEWRAN::SelectedRandom&)’:
newran.cxx:841:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:841:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::AddedSelectedRandom& NEWRAN::operator+(NEWRAN::SelectedRandom&, NEWRAN::AddedSelectedRandom&)’:
newran.cxx:848:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:848:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In function ‘NEWRAN::AddedSelectedRandom& NEWRAN::operator+(NEWRAN::AddedSelectedRandom&, NEWRAN::AddedSelectedRandom&)’:
newran.cxx:855:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:855:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
newran.cxx: In member function ‘NEWRAN::SelectedRandom& NEWRAN::Random::operator()(double)’:
newran.cxx:861:4: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if (!r) ErrorNoSpace(); return *r;
^~
newran.cxx:861:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
if (!r) ErrorNoSpace(); return *r;
^~~~~~
/bin/rm -f myexcept.cxx
/bin/rm -f hist.cxx
/bin/rm -f newran.cxx
ar cr libnewran.a hist.o newran.o extreal.o myexcept.o
echo libnewran.a
libnewran.a
make[1]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
make[2]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
make[2]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
make[3]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
make[3]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
Installing stable header files
install -p -m 0664 boolean.h /build/fsl/src/fsl/extras/include/newran/
install -p -m 0664 extreal.h /build/fsl/src/fsl/extras/include/newran/
install -p -m 0664 include.h /build/fsl/src/fsl/extras/include/newran/
install -p -m 0664 myexcept.h /build/fsl/src/fsl/extras/include/newran/
install -p -m 0664 newran.h /build/fsl/src/fsl/extras/include/newran/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
Installing stable library archives
install -p -m 0664 libnewran.a /build/fsl/src/fsl/extras/lib
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/doc/newran/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/refdoc/newran/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
make[4]: Entering directory '/build/fsl/src/fsl/extras/src/newran'
make[4]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
make[3]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
make[2]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
make[1]: Leaving directory '/build/fsl/src/fsl/extras/src/newran'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot tryrand
-------------------------
Successfully made newran
Making project ../include/armawrap/dummy_newmat
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat
Building dependency file depend.mk
g++ -c -o newmat.o newmat.cpp
ar -cr libnewmat.a newmat.o
ranlib libnewmat.a
make[1]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[2]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
g++ -c -o newmat.o newmat.cpp
ar -cr libnewmat.a newmat.o
ranlib libnewmat.a
make[2]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[2]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[3]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[3]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[4]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
Installing stable header files
make[4]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[4]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
Installing stable library archives
install -p -m 0664 libnewmat.a /build/fsl/src/fsl/extras/lib
make[4]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[4]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[4]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/doc/dummy_newmat/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[4]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/extras/refdoc/dummy_newmat/
make[4]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[4]: Entering directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[4]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[3]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[2]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
make[1]: Leaving directory '/build/fsl/src/fsl/extras/include/armawrap/dummy_newmat'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
-------------------------
Successfully made ../include/armawrap/dummy_newmat
BUILD successfully made all projects
Making project src/CiftiLib-master
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
Building dependency file depend.mk
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
/bin/rm -f /tmp/fslgrot Common/AString.o Common/BinaryFile.o Common/MathFunctions.o Common/XmlAdapter.o Common/CiftiException.o Common/FloatMatrix.o Common/Vector3D.o Nifti/NiftiHeader.o Nifti/NiftiIO.o Cifti/CiftiBrainModelsMap.o Cifti/CiftiFile.o Cifti/CiftiLabelsMap.o Cifti/CiftiMappingType.o Cifti/CiftiParcelsMap.o Cifti/CiftiScalarsMap.o Cifti/CiftiSeriesMap.o Cifti/CiftiVersion.o Cifti/CiftiXML.o Cifti/Label.o Cifti/LabelTable.o Cifti/MetaData.o Cifti/StructureEnum.o Cifti/VolumeSpace.o example/*.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
Building dependency file depend.mk
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Common/AString.o Common/AString.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Common/BinaryFile.o Common/BinaryFile.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Common/MathFunctions.o Common/MathFunctions.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Common/XmlAdapter.o Common/XmlAdapter.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Common/CiftiException.o Common/CiftiException.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Common/FloatMatrix.o Common/FloatMatrix.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Common/Vector3D.o Common/Vector3D.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Nifti/NiftiHeader.o Nifti/NiftiHeader.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Nifti/NiftiIO.o Nifti/NiftiIO.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/CiftiBrainModelsMap.o Cifti/CiftiBrainModelsMap.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/CiftiFile.o Cifti/CiftiFile.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/CiftiLabelsMap.o Cifti/CiftiLabelsMap.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/CiftiMappingType.o Cifti/CiftiMappingType.cxx
Common/MathFunctions.cxx: In static member function ‘static bool cifti::MathFunctions::matrixToQuatern(const double (*)[3], double*)’:
Common/MathFunctions.cxx:1557:34: warning: narrowing conversion of ‘(double)(* matrix)[0]’ from ‘double’ to ‘float’ inside { } [-Wnarrowing]
float ivec[3] = { matrix[0][0], matrix[1][0], matrix[2][0] };
~~~~~~~~~~~^
Common/MathFunctions.cxx:1557:48: warning: narrowing conversion of ‘(double)(*(matrix + 24))[0]’ from ‘double’ to ‘float’ inside { } [-Wnarrowing]
float ivec[3] = { matrix[0][0], matrix[1][0], matrix[2][0] };
~~~~~~~~~~~^
Common/MathFunctions.cxx:1557:62: warning: narrowing conversion of ‘(double)(*(matrix + 48))[0]’ from ‘double’ to ‘float’ inside { } [-Wnarrowing]
float ivec[3] = { matrix[0][0], matrix[1][0], matrix[2][0] };
~~~~~~~~~~~^
Common/MathFunctions.cxx:1558:34: warning: narrowing conversion of ‘(double)(* matrix)[1]’ from ‘double’ to ‘float’ inside { } [-Wnarrowing]
float jvec[3] = { matrix[0][1], matrix[1][1], matrix[2][1] };
~~~~~~~~~~~^
Common/MathFunctions.cxx:1558:48: warning: narrowing conversion of ‘(double)(*(matrix + 24))[1]’ from ‘double’ to ‘float’ inside { } [-Wnarrowing]
float jvec[3] = { matrix[0][1], matrix[1][1], matrix[2][1] };
~~~~~~~~~~~^
Common/MathFunctions.cxx:1558:62: warning: narrowing conversion of ‘(double)(*(matrix + 48))[1]’ from ‘double’ to ‘float’ inside { } [-Wnarrowing]
float jvec[3] = { matrix[0][1], matrix[1][1], matrix[2][1] };
~~~~~~~~~~~^
Common/MathFunctions.cxx:1559:34: warning: narrowing conversion of ‘(double)(* matrix)[2]’ from ‘double’ to ‘float’ inside { } [-Wnarrowing]
float kvec[3] = { matrix[0][2], matrix[1][2], matrix[2][2] };
~~~~~~~~~~~^
Common/MathFunctions.cxx:1559:48: warning: narrowing conversion of ‘(double)(*(matrix + 24))[2]’ from ‘double’ to ‘float’ inside { } [-Wnarrowing]
float kvec[3] = { matrix[0][2], matrix[1][2], matrix[2][2] };
~~~~~~~~~~~^
Common/MathFunctions.cxx:1559:62: warning: narrowing conversion of ‘(double)(*(matrix + 48))[2]’ from ‘double’ to ‘float’ inside { } [-Wnarrowing]
float kvec[3] = { matrix[0][2], matrix[1][2], matrix[2][2] };
~~~~~~~~~~~^
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/CiftiParcelsMap.o Cifti/CiftiParcelsMap.cxx
Common/BinaryFile.cxx: In member function ‘bool cifti::BinaryFile::getOpenForRead()’:
Common/BinaryFile.cxx:129:31: warning: bitwise comparison always evaluates to true [-Wtautological-compare]
return (m_curMode | READ) != 0;
~~~~~~~~~~~~~~~~~~~^~~~
Common/BinaryFile.cxx: In member function ‘bool cifti::BinaryFile::getOpenForWrite()’:
Common/BinaryFile.cxx:134:32: warning: bitwise comparison always evaluates to true [-Wtautological-compare]
return (m_curMode | WRITE) != 0;
~~~~~~~~~~~~~~~~~~~~^~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from Common/XmlAdapter.h:56,
from Common/XmlAdapter.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from Common/AString.h:77,
from Common/XmlAdapter.h:31,
from Common/XmlAdapter.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from Common/XmlAdapter.h:56,
from Common/XmlAdapter.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from Common/AString.h:77,
from Common/XmlAdapter.h:31,
from Common/XmlAdapter.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from Common/XmlAdapter.h:56,
from Common/XmlAdapter.cxx:28:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from Common/AString.h:77,
from Common/XmlAdapter.h:31,
from Common/XmlAdapter.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from Common/XmlAdapter.h:56,
from Common/XmlAdapter.cxx:28:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from Common/AString.h:77,
from Common/XmlAdapter.h:31,
from Common/XmlAdapter.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from Common/XmlAdapter.h:56,
from Common/XmlAdapter.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from Common/AString.h:77,
from Common/XmlAdapter.h:31,
from Common/XmlAdapter.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from Common/XmlAdapter.h:56,
from Common/XmlAdapter.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from Common/AString.h:77,
from Common/XmlAdapter.h:31,
from Common/XmlAdapter.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiBrainModelsMap.h:31,
from Cifti/CiftiBrainModelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiMappingType.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/CiftiScalarsMap.o Cifti/CiftiScalarsMap.cxx
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiLabelsMap.h:31,
from Cifti/CiftiLabelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiFile.h:32,
from Cifti/CiftiFile.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/CiftiFile.h:31,
from Cifti/CiftiFile.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiFile.h:32,
from Cifti/CiftiFile.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/CiftiFile.h:31,
from Cifti/CiftiFile.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiFile.h:32,
from Cifti/CiftiFile.cxx:28:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/CiftiFile.h:31,
from Cifti/CiftiFile.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiFile.h:32,
from Cifti/CiftiFile.cxx:28:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/CiftiFile.h:31,
from Cifti/CiftiFile.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiFile.h:32,
from Cifti/CiftiFile.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/CiftiFile.h:31,
from Cifti/CiftiFile.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiFile.h:32,
from Cifti/CiftiFile.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/CiftiFile.h:31,
from Cifti/CiftiFile.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/CiftiSeriesMap.o Cifti/CiftiSeriesMap.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/CiftiVersion.o Cifti/CiftiVersion.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/CiftiXML.o Cifti/CiftiXML.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/Label.o Cifti/Label.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/LabelTable.o Cifti/LabelTable.cxx
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiParcelsMap.h:31,
from Cifti/CiftiParcelsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/MetaData.o Cifti/MetaData.cxx
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/StructureEnum.o Cifti/StructureEnum.cxx
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiScalarsMap.h:31,
from Cifti/CiftiScalarsMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiSeriesMap.h:32,
from Cifti/CiftiSeriesMap.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/CiftiMappingType.h:33,
from Cifti/CiftiXML.h:31,
from Cifti/CiftiXML.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/LabelTable.h:38,
from Cifti/LabelTable.cxx:34:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/Label.h:31,
from Cifti/LabelTable.cxx:33:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/LabelTable.h:38,
from Cifti/LabelTable.cxx:34:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/Label.h:31,
from Cifti/LabelTable.cxx:33:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/LabelTable.h:38,
from Cifti/LabelTable.cxx:34:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/Label.h:31,
from Cifti/LabelTable.cxx:33:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/LabelTable.h:38,
from Cifti/LabelTable.cxx:34:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/Label.h:31,
from Cifti/LabelTable.cxx:33:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/LabelTable.h:38,
from Cifti/LabelTable.cxx:34:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/Label.h:31,
from Cifti/LabelTable.cxx:33:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/LabelTable.h:38,
from Cifti/LabelTable.cxx:34:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from Cifti/Label.h:31,
from Cifti/LabelTable.cxx:33:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
gcc -c -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -g -DCIFTILIB_USE_XMLPP -I/build/fsl/src/fsl/extras/include -I/usr/include/libxml2 -I/usr/include/libxml++-2.6 -I/usr/lib/libxml++-2.6/include -I/usr/include/boost -I./Common -I./Nifti -I./Cifti -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -o Cifti/VolumeSpace.o Cifti/VolumeSpace.cxx
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/MetaData.h:34,
from Cifti/MetaData.cxx:32:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/CiftiException.h:31,
from Cifti/MetaData.cxx:31:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/MetaData.h:34,
from Cifti/MetaData.cxx:32:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/CiftiException.h:31,
from Cifti/MetaData.cxx:31:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/MetaData.h:34,
from Cifti/MetaData.cxx:32:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/CiftiException.h:31,
from Cifti/MetaData.cxx:31:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/MetaData.h:34,
from Cifti/MetaData.cxx:32:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/CiftiException.h:31,
from Cifti/MetaData.cxx:31:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/MetaData.h:34,
from Cifti/MetaData.cxx:32:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/CiftiException.h:31,
from Cifti/MetaData.cxx:31:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/MetaData.h:34,
from Cifti/MetaData.cxx:32:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/CiftiException.h:31,
from Cifti/MetaData.cxx:31:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:53,
from ./Common/XmlAdapter.h:56,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/saxparser.h:224:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<_xmlSAXHandler> sax_handler_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:54,
from ./Common/XmlAdapter.h:56,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/libxml++-2.6/libxml++/parsers/textreader.h:260:10: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<PropertyReader> propertyreader;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:69,
from ./Common/XmlAdapter.h:56,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/libxml++-2.6/libxml++/relaxngschema.h:108:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:70,
from ./Common/XmlAdapter.h:56,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/libxml++-2.6/libxml++/xsdschema.h:99:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:73,
from ./Common/XmlAdapter.h:56,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/relaxngvalidator.h:159:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/include/libxml++-2.6/libxml++/libxml++.h:75,
from ./Common/XmlAdapter.h:56,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/libxml++-2.6/libxml++/validators/xsdvalidator.h:149:8: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
std::auto_ptr<Impl> pimpl_;
^~~~~~~~
In file included from /usr/include/c++/8.2.1/bits/locale_conv.h:41,
from /usr/include/c++/8.2.1/locale:43,
from /usr/include/c++/8.2.1/iomanip:43,
from /build/fsl/src/fsl/extras/include/glibmm/ustring.h:4,
from ./Common/AString.h:77,
from ./Common/XmlAdapter.h:31,
from Cifti/VolumeSpace.h:34,
from Cifti/VolumeSpace.cxx:28:
/usr/include/c++/8.2.1/bits/unique_ptr.h:53:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
ar -r libcifti.a Common/AString.o Common/BinaryFile.o Common/MathFunctions.o Common/XmlAdapter.o Common/CiftiException.o Common/FloatMatrix.o Common/Vector3D.o Nifti/NiftiHeader.o Nifti/NiftiIO.o Cifti/CiftiBrainModelsMap.o Cifti/CiftiFile.o Cifti/CiftiLabelsMap.o Cifti/CiftiMappingType.o Cifti/CiftiParcelsMap.o Cifti/CiftiScalarsMap.o Cifti/CiftiSeriesMap.o Cifti/CiftiVersion.o Cifti/CiftiXML.o Cifti/Label.o Cifti/LabelTable.o Cifti/MetaData.o Cifti/StructureEnum.o Cifti/VolumeSpace.o
ar: creating libcifti.a
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
make[1]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
make[2]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
make[2]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
make[3]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
make[3]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
make[4]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
Installing stable header files
install -p -m 0664 Cifti/CiftiBrainModelsMap.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/CiftiFile.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/CiftiLabelsMap.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/CiftiMappingType.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/CiftiParcelsMap.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/CiftiScalarsMap.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/CiftiSeriesMap.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/CiftiVersion.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/CiftiXML.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/Label.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/LabelTable.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/MetaData.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/StructureEnum.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Cifti/VolumeSpace.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/AString.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/BinaryFile.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/ByteSwapping.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/CiftiAssert.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/CiftiException.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/Compact3DLookup.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/CompactLookup.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/FloatMatrix.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/MathFunctions.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/MatrixFunctions.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/MultiDimArray.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/MultiDimIterator.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/Vector3D.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/VoxelIJK.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Common/XmlAdapter.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Nifti/nifti1.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Nifti/nifti2.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Nifti/NiftiHeader.h /build/fsl/src/fsl/include/ciftiio/
install -p -m 0664 Nifti/NiftiIO.h /build/fsl/src/fsl/include/ciftiio/
make[4]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
make[4]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
Installing stable library archives
install -p -m 0664 libcifti.a /build/fsl/src/fsl/lib
make[4]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
make[4]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
make[4]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/doc/ciftiio/
make[4]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
make[4]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/refdoc/ciftiio/
make[4]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
make[4]: Entering directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
make[4]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
make[3]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
make[2]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
make[1]: Leaving directory '/build/fsl/src/fsl/src/CiftiLib-master'
Makefile:34: warning: overriding recipe for target 'clean'
/build/fsl/src/fsl/config/common/rules.mk:32: warning: ignoring old recipe for target 'clean'
/bin/rm -f /tmp/fslgrot Common/AString.o Common/BinaryFile.o Common/MathFunctions.o Common/XmlAdapter.o Common/CiftiException.o Common/FloatMatrix.o Common/Vector3D.o Nifti/NiftiHeader.o Nifti/NiftiIO.o Cifti/CiftiBrainModelsMap.o Cifti/CiftiFile.o Cifti/CiftiLabelsMap.o Cifti/CiftiMappingType.o Cifti/CiftiParcelsMap.o Cifti/CiftiScalarsMap.o Cifti/CiftiSeriesMap.o Cifti/CiftiVersion.o Cifti/CiftiXML.o Cifti/Label.o Cifti/LabelTable.o Cifti/MetaData.o Cifti/StructureEnum.o Cifti/VolumeSpace.o example/*.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
-------------------------
Successfully made CiftiLib-master
Making project src/utils
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
Building dependency file depend.mk
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -DBUILDSTRING='"6.0.1"' -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o matches.o matches.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -DBUILDSTRING='"6.0.1"' -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o functions.o functions.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -DBUILDSTRING='"6.0.1"' -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o usage.o usage.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -DBUILDSTRING='"6.0.1"' -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o check.o check.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -DBUILDSTRING='"6.0.1"' -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o parse.o parse.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -DBUILDSTRING='"6.0.1"' -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o log.o log.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -DBUILDSTRING='"6.0.1"' -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o time_tracer.o time_tracer.cc
In file included from usage.cc:65:
options.h:602:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(X_OptionError);
^~~~~
In file included from parse.cc:66:
options.h:602:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(X_OptionError);
^~~~~
In file included from functions.cc:65:
options.h:602:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(X_OptionError);
^~~~~
In file included from matches.cc:65:
options.h:602:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(X_OptionError);
^~~~~
parse.cc:86:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(X_OptionError)
^~~~~
In file included from check.cc:65:
options.h:602:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw(X_OptionError);
^~~~~
check.cc: In member function ‘bool Utilities::OptionParser::check_compulsory_arguments(bool)’:
check.cc:87:2: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if(verbose)
^~
check.cc:88:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
(*option)->usage(cerr); cerr << endl;
^~~~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from log.h:85,
from log.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from log.h:85,
from log.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from log.h:85,
from log.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
/bin/rm -f libutils.a
ar -r libutils.a matches.o functions.o usage.o check.o parse.o log.o time_tracer.o
ar: creating libutils.a
echo libutils.a
libutils.a
make[1]: Entering directory '/build/fsl/src/fsl/src/utils'
make[2]: Entering directory '/build/fsl/src/fsl/src/utils'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/src/utils'
make[2]: Entering directory '/build/fsl/src/fsl/src/utils'
make[3]: Entering directory '/build/fsl/src/fsl/src/utils'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/src/utils'
make[3]: Entering directory '/build/fsl/src/fsl/src/utils'
make[4]: Entering directory '/build/fsl/src/fsl/src/utils'
Installing stable header files
install -p -m 0664 buildno.h /build/fsl/src/fsl/include/utils/
install -p -m 0664 fsl_isfinite.h /build/fsl/src/fsl/include/utils/
install -p -m 0664 log.h /build/fsl/src/fsl/include/utils/
install -p -m 0664 options.h /build/fsl/src/fsl/include/utils/
install -p -m 0664 stack_dump.h /build/fsl/src/fsl/include/utils/
install -p -m 0664 time_tracer.h /build/fsl/src/fsl/include/utils/
install -p -m 0664 tracer_plus.h /build/fsl/src/fsl/include/utils/
make[4]: Leaving directory '/build/fsl/src/fsl/src/utils'
make[4]: Entering directory '/build/fsl/src/fsl/src/utils'
Installing stable library archives
install -p -m 0664 libutils.a /build/fsl/src/fsl/lib
make[4]: Leaving directory '/build/fsl/src/fsl/src/utils'
make[4]: Entering directory '/build/fsl/src/fsl/src/utils'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/src/utils'
make[4]: Entering directory '/build/fsl/src/fsl/src/utils'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/doc/utils/
make[4]: Leaving directory '/build/fsl/src/fsl/src/utils'
make[4]: Entering directory '/build/fsl/src/fsl/src/utils'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/refdoc/utils/
make[4]: Leaving directory '/build/fsl/src/fsl/src/utils'
make[4]: Entering directory '/build/fsl/src/fsl/src/utils'
make[4]: Leaving directory '/build/fsl/src/fsl/src/utils'
make[3]: Leaving directory '/build/fsl/src/fsl/src/utils'
make[2]: Leaving directory '/build/fsl/src/fsl/src/utils'
make[1]: Leaving directory '/build/fsl/src/fsl/src/utils'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
-------------------------
Successfully made utils
Making project src/znzlib
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot testprog
Building dependency file depend.mk
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/usr/include -DHAVE_ZLIB -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o znzlib.o znzlib.c
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
ar -r libznz.a znzlib.o
ar: creating libznz.a
make[1]: Entering directory '/build/fsl/src/fsl/src/znzlib'
make[2]: Entering directory '/build/fsl/src/fsl/src/znzlib'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
make[2]: Entering directory '/build/fsl/src/fsl/src/znzlib'
make[3]: Entering directory '/build/fsl/src/fsl/src/znzlib'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
make[3]: Entering directory '/build/fsl/src/fsl/src/znzlib'
make[4]: Entering directory '/build/fsl/src/fsl/src/znzlib'
Installing stable header files
install -p -m 0664 config.h /build/fsl/src/fsl/include/znzlib/
install -p -m 0664 znzlib.h /build/fsl/src/fsl/include/znzlib/
make[4]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
make[4]: Entering directory '/build/fsl/src/fsl/src/znzlib'
Installing stable library archives
install -p -m 0664 libznz.a /build/fsl/src/fsl/lib
make[4]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
make[4]: Entering directory '/build/fsl/src/fsl/src/znzlib'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
make[4]: Entering directory '/build/fsl/src/fsl/src/znzlib'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/doc/znzlib/
make[4]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
make[4]: Entering directory '/build/fsl/src/fsl/src/znzlib'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/refdoc/znzlib/
make[4]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
make[4]: Entering directory '/build/fsl/src/fsl/src/znzlib'
make[4]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
make[3]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
make[2]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
make[1]: Leaving directory '/build/fsl/src/fsl/src/znzlib'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot testprog
-------------------------
Successfully made znzlib
Making project src/NewNifti
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
Building dependency file depend.mk
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/usr/include -DHAVE_ZLIB -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o legacyFunctions.o legacyFunctions.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/usr/include -DHAVE_ZLIB -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o NewNifti.o NewNifti.cc
NewNifti.cc: In member function ‘void NiftiIO::readExtensions(const NiftiHeader&, std::vector<NiftiExtension>&)’:
NewNifti.cc:639:11: warning: catching polymorphic type ‘struct NiftiException’ by value [-Wcatch-value=]
catch ( NiftiException ) { //Short read at this point implies NIFTI-pair with no extension
^~~~~~~~~~~~~~
NewNifti.cc:650:45: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int64_t’ {aka ‘const long int’} [-Wsign-compare]
if ( header.singleFile() && bytesRead+8 > header.vox_offset )
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
NewNifti.cc:654:15: warning: catching polymorphic type ‘struct NiftiException’ by value [-Wcatch-value=]
} catch ( NiftiException ) { //On a read error, return if reading pair or rethrow
^~~~~~~~~~~~~~
NewNifti.cc:663:64: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int64_t’ {aka ‘const long int’} [-Wsign-compare]
if ( header.singleFile() && bytesRead+newExtension.esize-8 > header.vox_offset )
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
NewNifti.cc:670:15: warning: catching polymorphic type ‘struct NiftiException’ by value [-Wcatch-value=]
} catch ( NiftiException ) { //On a read error, return if reading pair or rethrow
^~~~~~~~~~~~~~
NewNifti.cc:677:43: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int64_t’ {aka ‘const long int’} [-Wsign-compare]
if ( header.singleFile() && bytesRead == header.vox_offset ) //We've read final extension for a single file, exit gracefully
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
ar -r libNewNifti.a legacyFunctions.o NewNifti.o
ar: creating libNewNifti.a
make[1]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
make[2]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
make[2]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
make[3]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
make[3]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
make[4]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
Installing stable header files
install -p -m 0664 legacyFunctions.h /build/fsl/src/fsl/include/NewNifti/
install -p -m 0664 NewNifti.h /build/fsl/src/fsl/include/NewNifti/
install -p -m 0664 nifti1.h /build/fsl/src/fsl/include/NewNifti/
install -p -m 0664 nifti2.h /build/fsl/src/fsl/include/NewNifti/
make[4]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
make[4]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
Installing stable library archives
install -p -m 0664 libNewNifti.a /build/fsl/src/fsl/lib
make[4]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
make[4]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
make[4]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/doc/NewNifti/
make[4]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
make[4]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/refdoc/NewNifti/
make[4]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
make[4]: Entering directory '/build/fsl/src/fsl/src/NewNifti'
make[4]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
make[3]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
make[2]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
make[1]: Leaving directory '/build/fsl/src/fsl/src/NewNifti'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
-------------------------
Successfully made NewNifti
Making project src/fslio
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
Building dependency file depend.mk
make: Nothing to be done for 'all'.
make[1]: Entering directory '/build/fsl/src/fsl/src/fslio'
make[2]: Entering directory '/build/fsl/src/fsl/src/fslio'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/src/fslio'
make[2]: Entering directory '/build/fsl/src/fsl/src/fslio'
make[3]: Entering directory '/build/fsl/src/fsl/src/fslio'
Installing stable binaries
install -p -m 0775 remove_ext /build/fsl/src/fsl/bin/
install -p -m 0775 imtest /build/fsl/src/fsl/bin/
install -p -m 0775 imln /build/fsl/src/fsl/bin/
install -p -m 0775 imrm /build/fsl/src/fsl/bin/
make[3]: Leaving directory '/build/fsl/src/fsl/src/fslio'
make[3]: Entering directory '/build/fsl/src/fsl/src/fslio'
make[4]: Entering directory '/build/fsl/src/fsl/src/fslio'
Installing stable header files
install -p -m 0664 dbh.h /build/fsl/src/fsl/include/fslio/
make[4]: Leaving directory '/build/fsl/src/fsl/src/fslio'
make[4]: Entering directory '/build/fsl/src/fsl/src/fslio'
Installing stable library archives
make[4]: Leaving directory '/build/fsl/src/fsl/src/fslio'
make[4]: Entering directory '/build/fsl/src/fsl/src/fslio'
Installing tcl scripts
install -p -m 0775 fslio.tcl /build/fsl/src/fsl/tcl/
make[4]: Leaving directory '/build/fsl/src/fsl/src/fslio'
make[4]: Entering directory '/build/fsl/src/fsl/src/fslio'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/doc/fslio/
make[4]: Leaving directory '/build/fsl/src/fsl/src/fslio'
make[4]: Entering directory '/build/fsl/src/fsl/src/fslio'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/refdoc/fslio/
make[4]: Leaving directory '/build/fsl/src/fsl/src/fslio'
make[4]: Entering directory '/build/fsl/src/fsl/src/fslio'
make[4]: Leaving directory '/build/fsl/src/fsl/src/fslio'
make[3]: Leaving directory '/build/fsl/src/fsl/src/fslio'
make[2]: Leaving directory '/build/fsl/src/fsl/src/fslio'
make[1]: Leaving directory '/build/fsl/src/fsl/src/fslio'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
-------------------------
Successfully made fslio
Making project src/giftiio
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
Building dependency file depend.mk
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -DHAVE_ZLIB -march=native -g -O3 -fexpensive-optimizations -m64 -DHAVE_ZLIB -I/usr/include/boost -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -std=c99 -D_FORTIFY_SOURCE=2 -c -o gifti_tool.o gifti_tool.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -DHAVE_ZLIB -march=native -g -O3 -fexpensive-optimizations -m64 -DHAVE_ZLIB -I/usr/include/boost -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -std=c99 -D_FORTIFY_SOURCE=2 -c -o gifti_io.o gifti_io.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -DHAVE_ZLIB -march=native -g -O3 -fexpensive-optimizations -m64 -DHAVE_ZLIB -I/usr/include/boost -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -std=c99 -D_FORTIFY_SOURCE=2 -c -o gifti_xml.o gifti_xml.c
gcc -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -DHAVE_ZLIB -march=native -g -O3 -fexpensive-optimizations -m64 -DHAVE_ZLIB -I/usr/include/boost -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -std=c99 -D_FORTIFY_SOURCE=2 -c -o gifti_test.o gifti_test.c
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
cc1: warning: command line option ‘-std=c++11’ is valid for C++/ObjC++ but not for C
gifti_test.c: In function ‘ewrite_data_line’:
gifti_test.c:277:13: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
for(c = 0; c < 2*cols; c+=2)fprintf(fp, "%f %f ",ptr[c],ptr[c+1]); break;
^~~
gifti_test.c:277:93: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
for(c = 0; c < 2*cols; c+=2)fprintf(fp, "%f %f ",ptr[c],ptr[c+1]); break;
^~~~~
gifti_test.c:319:13: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
for(c = 0; c < 2*cols; c+=2)fprintf(fp, "%f %f ",ptr[c],ptr[c+1]); break;
^~~
gifti_test.c:319:93: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
for(c = 0; c < 2*cols; c+=2)fprintf(fp, "%f %f ",ptr[c],ptr[c+1]); break;
^~~~~
gifti_xml.c: In function ‘append_to_xform’:
gifti_xml.c:1984:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
if( xd->verb > 5 )
^~
gifti_xml.c:1988:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
memmove(xd->xdata, xd->xdata+xd->xlen -(unused+1) -xd->doff,
^~~~~~~
gifti_xml.c: In function ‘decode_b64’:
gifti_xml.c:2056:29: warning: variable ‘c’ set but not used [-Wunused-but-set-variable]
unsigned char a, b, c;
^
gifti_tool.c: In function ‘gt_read_dataset’:
gifti_tool.c:776:18: warning: implicit declaration of function ‘nifti_get_intlist’; did you mean ‘gifti_get_indent’? [-Wimplicit-function-declaration]
dalist = nifti_get_intlist(numDA, iptr+1);
^~~~~~~~~~~~~~~~~
gifti_get_indent
gifti_tool.c:776:16: warning: assignment to ‘int *’ from ‘int’ makes pointer from integer without a cast [-Wint-conversion]
dalist = nifti_get_intlist(numDA, iptr+1);
^
gifti_tool.c: In function ‘ewrite_data_line’:
gifti_tool.c:1776:13: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
for(c = 0; c < 2*cols; c+=2)fprintf(fp, "%f %f ",ptr[c],ptr[c+1]); break;
^~~
gifti_tool.c:1776:93: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
for(c = 0; c < 2*cols; c+=2)fprintf(fp, "%f %f ",ptr[c],ptr[c+1]); break;
^~~~~
gifti_tool.c:1821:13: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
for(c = 0; c < 2*cols; c+=2)fprintf(fp, "%f %f ",ptr[c],ptr[c+1]); break;
^~~
gifti_tool.c:1821:93: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
for(c = 0; c < 2*cols; c+=2)fprintf(fp, "%f %f ",ptr[c],ptr[c+1]); break;
^~~~~
gifti_io.c: In function ‘gifti_compare_nvpairs’:
gifti_io.c:3372:15: warning: variable ‘len’ set but not used [-Wunused-but-set-variable]
int c, len, diffs = 0;
^~~
gifti_io.c: In function ‘compare_labeltables’:
gifti_io.c:3467:12: warning: variable ‘roff’ set but not used [-Wunused-but-set-variable]
int c, roff, offset, diffs = 0;
^~~~
gcc -o gifti_tool gifti_tool.o gifti_io.o gifti_xml.o \
-Wl,-rpath,'$ORIGIN/../lib' -L. -L/build/fsl/src/fsl/lib -L/build/fsl/src/fsl/lib -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -lexpat -lznz -lz -lm
gcc -o gifti_test gifti_test.o gifti_io.o gifti_xml.o \
-Wl,-rpath,'$ORIGIN/../lib' -L. -L/build/fsl/src/fsl/lib -L/build/fsl/src/fsl/lib -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -lexpat -lznz -lz -lm
ar -r libgiftiio.a gifti_test.o gifti_io.o gifti_xml.o
ar: creating libgiftiio.a
make[1]: Entering directory '/build/fsl/src/fsl/src/giftiio'
make[2]: Entering directory '/build/fsl/src/fsl/src/giftiio'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
make[2]: Entering directory '/build/fsl/src/fsl/src/giftiio'
make[3]: Entering directory '/build/fsl/src/fsl/src/giftiio'
Installing stable binaries
make[3]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
make[3]: Entering directory '/build/fsl/src/fsl/src/giftiio'
make[4]: Entering directory '/build/fsl/src/fsl/src/giftiio'
Installing stable header files
install -p -m 0664 gifti_io.h /build/fsl/src/fsl/include/giftiio/
install -p -m 0664 gifti_test.h /build/fsl/src/fsl/include/giftiio/
install -p -m 0664 gifti_tool.h /build/fsl/src/fsl/include/giftiio/
install -p -m 0664 gifti_xml.h /build/fsl/src/fsl/include/giftiio/
make[4]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
make[4]: Entering directory '/build/fsl/src/fsl/src/giftiio'
Installing stable library archives
install -p -m 0664 libgiftiio.a /build/fsl/src/fsl/lib
make[4]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
make[4]: Entering directory '/build/fsl/src/fsl/src/giftiio'
Installing tcl scripts
make[4]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
make[4]: Entering directory '/build/fsl/src/fsl/src/giftiio'
Installing (userguide) documents
/bin/chmod -R ug+w /build/fsl/src/fsl/doc/giftiio/
make[4]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
make[4]: Entering directory '/build/fsl/src/fsl/src/giftiio'
Installing reference documents
/bin/chmod -R ug+w /build/fsl/src/fsl/refdoc/giftiio/
make[4]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
make[4]: Entering directory '/build/fsl/src/fsl/src/giftiio'
make[4]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
make[3]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
make[2]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
make[1]: Leaving directory '/build/fsl/src/fsl/src/giftiio'
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
-------------------------
Successfully made giftiio
Making project src/miscmaths
Building dependency file depend.mk
/bin/rm -f /tmp/fslgrot *.o *.a *.exe core depend.mk
/bin/rm -f /tmp/fslgrot
Building dependency file depend.mk
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o miscmaths.o miscmaths.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o optimise.o optimise.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o miscprob.o miscprob.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o kernel.o kernel.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o histogram.o histogram.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o base2z.o base2z.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o t2z.o t2z.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o f2z.o f2z.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o minimize.o minimize.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o cspline.o cspline.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o sparse_matrix.o sparse_matrix.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o sparsefn.o sparsefn.cc
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o rungekutta.o rungekutta.cc
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from optimise.h:76,
from optimise.cc:74:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from minimize.cc:75:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from cspline.cc:75:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from t2z.h:74,
from t2z.cc:70:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from kernel.h:78,
from kernel.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from f2z.h:74,
from f2z.cc:70:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from histogram.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from miscprob.h:75,
from miscprob.cc:71:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from miscmaths.cc:74:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from sparse_matrix.h:73,
from sparsefn.cc:76:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from sparse_matrix.h:73,
from sparse_matrix.cc:76:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from minimize.cc:75:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from optimise.h:76,
from optimise.cc:74:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from kernel.h:78,
from kernel.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from minimize.cc:75:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from cspline.cc:75:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from optimise.h:76,
from optimise.cc:74:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from kernel.h:78,
from kernel.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from cspline.cc:75:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from f2z.h:74,
from f2z.cc:70:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from histogram.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from t2z.h:74,
from t2z.cc:70:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from f2z.h:74,
from f2z.cc:70:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from histogram.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from t2z.h:74,
from t2z.cc:70:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from miscprob.h:75,
from miscprob.cc:71:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from miscmaths.cc:74:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from sparse_matrix.h:73,
from sparsefn.cc:76:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from miscmaths.cc:74:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from miscprob.h:75,
from miscprob.cc:71:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from sparse_matrix.h:73,
from sparsefn.cc:76:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from sparse_matrix.h:73,
from sparse_matrix.cc:76:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from sparse_matrix.h:73,
from sparse_matrix.cc:76:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
histogram.cc: In member function ‘void MISCMATHS::Histogram::match(MISCMATHS::Histogram&)’:
histogram.cc:254:20: warning: variable ‘val’ set but not used [-Wunused-but-set-variable]
double cdfval, val,dist;
^~~
minimize.cc: In function ‘void MISCMATHS::scg(NEWMAT::ColumnVector&, const MISCMATHS::gEvalFunction&, NEWMAT::ColumnVector&, float, float, int)’:
minimize.cc:454:9: warning: variable ‘fnow’ set but not used [-Wunused-but-set-variable]
float fnow=0,fnew=0;
^~~~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from rungekutta.h:77,
from rungekutta.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:60,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from miscprob.h:75,
from miscprob.cc:71:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/operator_insert.hpp: In instantiation of ‘armawrap::AWInsertManager<elem_type, wT>::~AWInsertManager() [with elem_type = double; wT = armawrap::AWMatrix<double>]’:
miscprob.cc:314:10: required from here
/build/fsl/src/fsl/extras/include/armawrap/armawrap/operator_insert.hpp:43:59: warning: throw will always call terminate() [-Wterminate]
throw AWException("A list of values was too short");
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/operator_insert.hpp:43:59: note: in C++11 destructors default to noexcept
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from rungekutta.h:77,
from rungekutta.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from rungekutta.h:77,
from rungekutta.cc:69:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
rungekutta.cc: In function ‘void MISCMATHS::rkqc(NEWMAT::ColumnVector&, float&, float&, NEWMAT::ColumnVector&, float, float, const MISCMATHS::Derivative&, const ColumnVector&)’:
rungekutta.cc:109:9: warning: variable ‘hdid’ set but not used [-Wunused-but-set-variable]
float hdid;
^~~~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:60,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from miscmaths.cc:74:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/operator_insert.hpp: In instantiation of ‘armawrap::AWInsertManager<elem_type, wT>::~AWInsertManager() [with elem_type = double; wT = armawrap::AWMatrix<double>]’:
miscmaths.cc:1301:46: required from here
/build/fsl/src/fsl/extras/include/armawrap/armawrap/operator_insert.hpp:43:59: warning: throw will always call terminate() [-Wterminate]
throw AWException("A list of values was too short");
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/operator_insert.hpp:43:59: note: in C++11 destructors default to noexcept
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:512,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from miscmaths.cc:74:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/arrayops_meat.hpp: In instantiation of ‘static void arma::arrayops::inplace_set(eT*, eT, arma::uword) [with eT = std::complex<double>; arma::uword = long long unsigned int]’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/arrayops_meat.hpp:133:24: required from ‘static void arma::arrayops::fill_zeros(eT*, arma::uword) [with eT = std::complex<double>; arma::uword = long long unsigned int]’
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_fft_meat.hpp:65:48: required from ‘static void arma::op_fft_real::apply(arma::Mat<std::complex<typename T1::pod_type> >&, const arma::mtOp<std::complex<typename T1::pod_type>, T1, arma::op_fft_real>&) [with T1 = arma::Col<double>; typename T1::pod_type = double]’
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/Mat_meat.hpp:4632:17: required from ‘const arma::Mat<eT>& arma::Mat<eT>::operator=(const arma::mtOp<eT, T1, op_type>&) [with T1 = arma::Col<double>; op_type = arma::op_fft_real; eT = std::complex<double>]’
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/Col_meat.hpp:357:21: required from ‘arma::Col<eT>::Col(const arma::Base<eT, T1>&) [with T1 = arma::mtOp<std::complex<double>, arma::Col<double>, arma::op_fft_real>; eT = std::complex<double>]’
/build/fsl/src/fsl/extras/include/armawrap/armawrap/function_fft.hpp:35:32: required from ‘void armawrap::RealFFT(const xT&, fT&, gT&) [with xT = armawrap::AWColVector<double>; fT = armawrap::AWColVector<double>; gT = armawrap::AWColVector<double>]’
miscmaths.cc:2273:47: required from here
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/arrayops_meat.hpp:579:18: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct std::complex<double>’; use assignment or value-initialization instead [-Wclass-memaccess]
std::memset(dest, 0, sizeof(eT)*n_elem);
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:27,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmatap.h:4,
from miscmaths.h:88,
from miscmaths.cc:74:
/usr/include/c++/8.2.1/complex:1221:12: note: ‘struct std::complex<double>’ declared here
struct complex<double>
^~~~~~~~~~~~~~~
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o nonlin.o nonlin.cpp
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o bfmatrix.o bfmatrix.cpp
c++ -Wall -ansi -pedantic -std=c++11 -Wno-long-long -m64 -march=native -g -O3 -fexpensive-optimizations -m64 -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/armawrap/armawrap -DARMA_USE_LAPACK -DARMA_USE_BLAS -DARMA_64BIT_WORD -I/usr/include/boost -I/build/fsl/src/fsl/extras/include/libprob -I. -I/build/fsl/src/fsl/include -I/build/fsl/src/fsl/include -D_FORTIFY_SOURCE=2 -march=native -mtune=native -O3 -pipe -fno-plt -D_FORTIFY_SOURCE=2 -c -o Simplex.o Simplex.cpp
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from bfmatrix.cpp:73:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from Simplex.cpp:24:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:508,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from nonlin.cpp:73:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:760:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_plus >::process(const eT val, const eT k) { return val + k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:763:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_pre >::process(const eT val, const eT k) { return k - val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:766:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_minus_post>::process(const eT val, const eT k) { return val - k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:769:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_times >::process(const eT val, const eT k) { return val * k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:772:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_pre >::process(const eT val, const eT k) { return k / val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:775:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_scalar_div_post >::process(const eT val, const eT k) { return val / k; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:778:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_square >::process(const eT val, const eT ) { return val*val; }
^
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/eop_core_meat.hpp:781:66: warning: ignoring attribute ‘const’ because it conflicts with attribute ‘pure’ [-Wattributes]
eop_core<eop_neg >::process(const eT val, const eT ) { return eop_aux::neg(val); }
^
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from nonlin.cpp:73:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:580,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from bfmatrix.cpp:73:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp: In static member function ‘static arma::uword arma::op_find::helper(arma::Mat<long long unsigned int>&, const arma::mtOp<long long unsigned int, T1, op_type>&, typename arma::arma_op_rel_only<op_type>::result, typename arma::arma_not_cx<typename T1::elem_type>::result)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:119:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else not_zero_i = false;
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_find_meat.hpp:121:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(is_same_type<op_type, op_rel_lt_pre >::yes) { not_zero_j = (val < tpj); }
^~
In file included from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo:593,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/armawrap.hpp:13,
from /build/fsl/src/fsl/extras/include/armawrap/armawrap/newmat.h:8,
from nonlin.cpp:73:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp: In static member function ‘static void arma::op_clamp::apply_noalias(arma::Mat<typename T1::elem_type>&, const arma::Proxy<T1>&, typename T1::elem_type, typename T1::elem_type)’:
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:71:7: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
else if(val_i > max_val) { val_i = max_val; }
^~~~
/build/fsl/src/fsl/extras/include/armawrap/armawrap/armadillo_bits/op_clamp_meat.hpp:73:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
if(val_j < min_val) { val_j = min_val; }
^~
In file included from /build/fsl/src/fsl/extras/i