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20201012_ecephys_session_upload_queue_static_data
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| { | |
| "upload_order":[ | |
| "probe_info", | |
| "unit_metrics", | |
| "manual_channel_structures" | |
| ], | |
| "expected_files":{ | |
| "lfp_data":{ | |
| "subtype":"EcephysSortedLfpContinuous", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "amplitudes":{ | |
| "subtype":"EcephysSortedAmplitudes", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "probe_info":{ | |
| "subtype":"EcephysSortedProbeInfo", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "channel_map":{ | |
| "subtype":"EcephysSortedChannelMap", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "newstep_csv":{ | |
| "subtype":"NewstepConfiguration", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "spike_times":{ | |
| "subtype":"EcephysSortedSpikeTimes", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "sync_report":{ | |
| "subtype":"EcephysSyncReport", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "eye_tracking":{ | |
| "subtype":"RawEyeTrackingVideo", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "unit_metrics":{ | |
| "subtype":"EcephysSortedMetrics", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "overlay_image":{ | |
| "subtype":"EcephysOverlayImage", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "platform_file":{ | |
| "subtype":"EcephysPlatformFile", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":false | |
| }, | |
| "surgery_notes":{ | |
| "subtype":"EcephysSurgeryNotes", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "channel_states":{ | |
| "subtype":"EcephysChannelStates", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "cluster_groups":{ | |
| "subtype":"EcephysSortedClusterGroup", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "fiducial_image":{ | |
| "subtype":"EcephysFiducialImage", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "lfp_timestamps":{ | |
| "subtype":"EcephysSortedLfpTimestamps", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "spike_clusters":{ | |
| "subtype":"EcephysSortedSpikeClusters", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "replay_stimulus":{ | |
| "subtype":"EcephysReplayStimulus", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "spike_templates":{ | |
| "subtype":"EcephysSortedSpikeTemplates", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "visual_stimulus":{ | |
| "subtype":"StimulusPickle", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "event_timestamps":{ | |
| "subtype":"EcephysSortedEventTimestamps", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "probe_parameters":{ | |
| "subtype":"EcephysSortedParams", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "whitening_matrix":{ | |
| "subtype":"EcephysSortedWhiteningMat", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "behavior_tracking":{ | |
| "subtype":"RawBehaviorTrackingVideo", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "channel_positions":{ | |
| "subtype":"EcephysSortedChannelPositions", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "probe_depth_image":{ | |
| "subtype":"EcephysProbeDepthImage", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "similar_templates":{ | |
| "subtype":"EcephysSortedSimilarTemplates", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "template_features":{ | |
| "subtype":"EcephysTemplateFeature", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "kilosort_templates":{ | |
| "subtype":"EcephysSortedTemplates", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "signal_noise_ratios":{ | |
| "subtype":"EcephysSortedSnr", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "unit_mean_waveforms":{ | |
| "subtype":"EcephysSortedMeanWaveforms", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "area_classifications":{ | |
| "subtype":"EcephysAreaClassifications", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "optogenetic_stimulus":{ | |
| "subtype":"OptoPickle", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "synchronization_data":{ | |
| "subtype":"EcephysRigSync", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "ephys_raw_data_probe_A":{ | |
| "subtype":"EcephysProbeRawData", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"true" | |
| }, | |
| "ephys_raw_data_probe_B":{ | |
| "subtype":"EcephysProbeRawData", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"true" | |
| }, | |
| "ephys_raw_data_probe_C":{ | |
| "subtype":"EcephysProbeRawData", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"true" | |
| }, | |
| "ephys_raw_data_probe_D":{ | |
| "subtype":"EcephysProbeRawData", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"true" | |
| }, | |
| "ephys_raw_data_probe_E":{ | |
| "subtype":"EcephysProbeRawData", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"true" | |
| }, | |
| "ephys_raw_data_probe_F":{ | |
| "subtype":"EcephysProbeRawData", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"true" | |
| }, | |
| "brain_surface_image_left":{ | |
| "subtype":"EcephysBrainSurfaceLeft", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "insertion_location_image":{ | |
| "subtype":"EcephysInsertionLocationImage", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "inverse_whitening_matrix":{ | |
| "subtype":"EcephysSortedWhiteningMatInv", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "template_feature_indices":{ | |
| "subtype":"EcephysTemplateFeatureInd", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "brain_surface_image_right":{ | |
| "subtype":"EcephysBrainSurfaceRight", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "kilosort_template_indices":{ | |
| "subtype":"EcephysTemplatesInd", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "manual_channel_structures":{ | |
| "subtype":"EcephysManualChannelStructureAssignments", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "isi_registration_coordinates":{ | |
| "subtype":"EcephysIsiRegistrationCoordinates", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "principal_component_features":{ | |
| "subtype":"EcephysSortedPcFeature", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "post_stimulus_surface_image_left":{ | |
| "subtype":"EcephysPostStimulusLeft", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "pre_insertion_surface_image_left":{ | |
| "subtype":"EcephysPreInsertionLeft", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "post_insertion_surface_image_left":{ | |
| "subtype":"EcephysPostInsertionLeft", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "post_stimulus_surface_image_right":{ | |
| "subtype":"EcephysPostStimulusRight", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "pre_experiment_surface_image_left":{ | |
| "subtype":"EcephysPreExperimentLeft", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "pre_insertion_surface_image_right":{ | |
| "subtype":"EcephysPreInsertionRight", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "post_experiment_surface_image_left":{ | |
| "subtype":"EcephysPostExperimentLeft", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "post_insertion_surface_image_right":{ | |
| "subtype":"EcephysPostInsertionRight", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "pre_experiment_surface_image_right":{ | |
| "subtype":"EcephysPreExperimentRight", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "post_experiment_surface_image_right":{ | |
| "subtype":"EcephysPostExperimentRight", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "principal_component_feature_indices":{ | |
| "subtype":"EcephysSortedPcFeatureInd", | |
| "required":true, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "post_removal_surgery_image":{ | |
| "subtype":"PostRemovalSurgeryImage", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "final_surgery_image":{ | |
| "subtype":"FinalSurgeryImage", | |
| "required":false, | |
| "supertype":"Image", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "eye_cam_json":{ | |
| "subtype":"RawEyeTrackingVideoMetadata", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "beh_cam_json":{ | |
| "subtype":"RawBehaviorTrackingVideoMetadata", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "face_cam_json":{ | |
| "subtype":"RawFaceTrackingVideoMetadata", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| }, | |
| "face_tracking":{ | |
| "subtype":"RawFaceTrackingVideo", | |
| "required":false, | |
| "supertype":"WellKnownFile", | |
| "enforce_uniqueness":"enforce" | |
| } | |
| }, | |
| "probe_fname_lookup":{ | |
| "SNR.npy":"signal_noise_ratios", | |
| "params.py":"probe_parameters", | |
| "metrics.csv":"unit_metrics", | |
| "templates.npy":"kilosort_templates", | |
| "amplitudes.npy":"amplitudes", | |
| "continuous.dat":"lfp_data", | |
| "ccf_regions.csv":"manual_channel_structures", | |
| "channel_map.npy":"channel_map", | |
| "pc_features.npy":"principal_component_features", | |
| "probe_info.json":"probe_info", | |
| "probe_depth.png": "probe_depth_image", | |
| "spike_times.npy":"spike_times", | |
| "cluster_group.csv":"cluster_groups", | |
| "cluster_group.tsv":"cluster_groups", | |
| "templates_ind.npy":"kilosort_template_indices", | |
| "whitening_mat.npy":"whitening_matrix", | |
| "channel_states.npy":"channel_states", | |
| "lfp_timestamps.npy":"lfp_timestamps", | |
| "mean_waveforms.npy":"unit_mean_waveforms", | |
| "pc_feature_ind.npy":"principal_component_feature_indices", | |
| "spike_clusters.npy":"spike_clusters", | |
| "spike_templates.npy":"spike_templates", | |
| "event_timestamps.npy":"event_timestamps", | |
| "channel_positions.npy":"channel_positions", | |
| "similar_templates.npy":"similar_templates", | |
| "template_features.npy":"template_features", | |
| "whitening_mat_inv.npy":"inverse_whitening_matrix", | |
| "template_feature_ind.npy":"template_feature_indices" | |
| } | |
| } |
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