gistfile1.txt

-- ---------------------------------------------------------------------
-- Arrow version:                                 1.0.0-SNAPSHOT
-- 
-- Build configuration summary:
--   Generator: Ninja
--   Build type: RELEASE
--   Source directory: /tmp/arrow-archery-pnrk14xg/89844a100/arrow/cpp
--   Install prefix: /home/wesm/miniconda/envs/archery
--   Compile commands: /tmp/arrow-archery-pnrk14xg/89844a100/build/compile_commands.json
-- 
-- Compile and link options:
-- 
--   ARROW_CXXFLAGS="" [default=""]
--       Compiler flags to append when compiling Arrow
--   ARROW_BUILD_STATIC=ON [default=ON]
--       Build static libraries
--   ARROW_BUILD_SHARED=ON [default=ON]
--       Build shared libraries
--   ARROW_NO_DEPRECATED_API=OFF [default=OFF]
--       Exclude deprecated APIs from build
--   ARROW_USE_CCACHE=ON [default=ON]
--       Use ccache when compiling (if available)
--   ARROW_USE_LD_GOLD=ON [default=OFF]
--       Use ld.gold for linking on Linux (if available)
--   ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF]
--       Use precompiled headers when compiling
--   ARROW_SIMD_LEVEL=SSE4_2 [default=NONE|SSE4_2|AVX2|AVX512]
--       SIMD compiler optimization level
--   ARROW_ARMV8_ARCH=armv8-a [default=armv8-a|armv8-a+crc+crypto]
--       Arm64 arch and extensions
--   ARROW_ALTIVEC=ON [default=ON]
--       Build with Altivec if compiler has support
--   ARROW_RPATH_ORIGIN=OFF [default=OFF]
--       Build Arrow libraries with RATH set to $ORIGIN
--   ARROW_INSTALL_NAME_RPATH=ON [default=ON]
--       Build Arrow libraries with install_name set to @rpath
--   ARROW_GGDB_DEBUG=ON [default=ON]
--       Pass -ggdb flag to debug builds
-- 
-- Test and benchmark options:
-- 
--   ARROW_BUILD_EXAMPLES=OFF [default=OFF]
--       Build the Arrow examples
--   ARROW_BUILD_TESTS=OFF [default=OFF]
--       Build the Arrow googletest unit tests
--   ARROW_ENABLE_TIMING_TESTS=ON [default=ON]
--       Enable timing-sensitive tests
--   ARROW_BUILD_INTEGRATION=OFF [default=OFF]
--       Build the Arrow integration test executables
--   ARROW_BUILD_BENCHMARKS=ON [default=OFF]
--       Build the Arrow micro benchmarks
--   ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF]
--       Build the Arrow micro reference benchmarks
--   ARROW_TEST_LINKAGE=shared [default=shared|static]
--       Linkage of Arrow libraries with unit tests executables.
--   ARROW_FUZZING=OFF [default=OFF]
--       Build Arrow Fuzzing executables
--   ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF]
--       Enable unit tests which use large memory
-- 
-- Lint options:
-- 
--   ARROW_ONLY_LINT=OFF [default=OFF]
--       Only define the lint and check-format targets
--   ARROW_VERBOSE_LINT=OFF [default=OFF]
--       If off, 'quiet' flags will be passed to linting tools
--   ARROW_GENERATE_COVERAGE=OFF [default=OFF]
--       Build with C++ code coverage enabled
-- 
-- Checks options:
-- 
--   ARROW_TEST_MEMCHECK=OFF [default=OFF]
--       Run the test suite using valgrind --tool=memcheck
--   ARROW_USE_ASAN=OFF [default=OFF]
--       Enable Address Sanitizer checks
--   ARROW_USE_TSAN=OFF [default=OFF]
--       Enable Thread Sanitizer checks
--   ARROW_USE_UBSAN=OFF [default=OFF]
--       Enable Undefined Behavior sanitizer checks
-- 
-- Project component options:
-- 
--   ARROW_BUILD_UTILITIES=OFF [default=OFF]
--       Build Arrow commandline utilities
--   ARROW_COMPUTE=ON [default=OFF]
--       Build the Arrow Compute Modules
--   ARROW_CSV=OFF [default=OFF]
--       Build the Arrow CSV Parser Module
--   ARROW_CUDA=OFF [default=OFF]
--       Build the Arrow CUDA extensions (requires CUDA toolkit)
--   ARROW_DATASET=OFF [default=OFF]
--       Build the Arrow Dataset Modules
--   ARROW_FILESYSTEM=OFF [default=OFF]
--       Build the Arrow Filesystem Layer
--   ARROW_FLIGHT=OFF [default=OFF]
--       Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers)
--   ARROW_GANDIVA=OFF [default=OFF]
--       Build the Gandiva libraries
--   ARROW_HDFS=OFF [default=OFF]
--       Build the Arrow HDFS bridge
--   ARROW_HIVESERVER2=OFF [default=OFF]
--       Build the HiveServer2 client and Arrow adapter
--   ARROW_IPC=OFF [default=ON]
--       Build the Arrow IPC extensions
--   ARROW_JEMALLOC=ON [default=ON]
--       Build the Arrow jemalloc-based allocator
--   ARROW_JNI=OFF [default=OFF]
--       Build the Arrow JNI lib
--   ARROW_JSON=ON [default=OFF]
--       Build Arrow with JSON support (requires RapidJSON)
--   ARROW_MIMALLOC=OFF [default=OFF]
--       Build the Arrow mimalloc-based allocator
--   ARROW_PARQUET=OFF [default=OFF]
--       Build the Parquet libraries
--   ARROW_ORC=OFF [default=OFF]
--       Build the Arrow ORC adapter
--   ARROW_PLASMA=OFF [default=OFF]
--       Build the plasma object store along with Arrow
--   ARROW_PLASMA_JAVA_CLIENT=OFF [default=OFF]
--       Build the plasma object store java client
--   ARROW_PYTHON=OFF [default=OFF]
--       Build the Arrow CPython extensions
--   ARROW_S3=OFF [default=OFF]
--       Build Arrow with S3 support (requires the AWS SDK for C++)
--   ARROW_TENSORFLOW=OFF [default=OFF]
--       Build Arrow with TensorFlow support enabled
-- 
-- Thirdparty toolchain options:
-- 
--   ARROW_DEPENDENCY_SOURCE=CONDA [default=AUTO|BUNDLED|SYSTEM|CONDA|BREW]
--       Method to use for acquiring arrow's build dependencies
--   ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF]
--       Show output from ExternalProjects rather than just logging to files
--   ARROW_BOOST_USE_SHARED=ON [default=ON]
--       Rely on boost shared libraries where relevant
--   ARROW_GFLAGS_USE_SHARED=ON [default=ON]
--       Rely on GFlags shared libraries where relevant
--   ARROW_GRPC_USE_SHARED=ON [default=ON]
--       Rely on gRPC shared libraries where relevant
--   ARROW_PROTOBUF_USE_SHARED=ON [default=ON]
--       Rely on Protocol Buffers shared libraries where relevant
--   ARROW_ZSTD_USE_SHARED=ON [default=ON]
--       Rely on zstd shared libraries where relevant
--   ARROW_WITH_BACKTRACE=ON [default=ON]
--       Build with backtrace support
--   ARROW_USE_GLOG=OFF [default=OFF]
--       Build libraries with glog support for pluggable logging
--   ARROW_WITH_BROTLI=OFF [default=OFF]
--       Build with Brotli compression
--   ARROW_WITH_BZ2=OFF [default=OFF]
--       Build with BZ2 compression
--   ARROW_WITH_LZ4=OFF [default=OFF]
--       Build with lz4 compression
--   ARROW_WITH_SNAPPY=OFF [default=OFF]
--       Build with Snappy compression
--   ARROW_WITH_ZLIB=OFF [default=OFF]
--       Build with zlib compression
--   ARROW_WITH_ZSTD=OFF [default=OFF]
--       Build with zstd compression
-- 
-- Parquet options:
-- 
--   PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF]
--       Depend only on Thirdparty headers to build libparquet.
--       Always OFF if building binaries
--   PARQUET_BUILD_EXECUTABLES=OFF [default=OFF]
--       Build the Parquet executable CLI tools. Requires static libraries to be built.
--   PARQUET_BUILD_EXAMPLES=OFF [default=OFF]
--       Build the Parquet examples. Requires static libraries to be built.
--   PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF]
--       Build support for encryption. Fail if OpenSSL is not found
-- 
-- Gandiva options:
-- 
--   ARROW_GANDIVA_JAVA=OFF [default=OFF]
--       Build the Gandiva JNI wrappers
--   ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF]
--       Include -static-libstdc++ -static-libgcc when linking with
--       Gandiva static libraries
--   ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""]
--       Compiler flags to append when pre-compiling Gandiva operations
-- 
-- Advanced developer options:
-- 
--   ARROW_EXTRA_ERROR_CONTEXT=OFF [default=OFF]
--       Compile with extra error context (line numbers, code)
--   ARROW_OPTIONAL_INSTALL=OFF [default=OFF]
--       If enabled install ONLY targets that have already been built. Please be
--       advised that if this is enabled 'install' will fail silently on components
--       that have not been built
--   Outputting build configuration summary to /tmp/arrow-archery-pnrk14xg/89844a100/build/cmake_summary.json
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/arrow-archery-pnrk14xg/89844a100/build
[2/213] Performing download step (verify and extract) for 'jemalloc_ep'
-- jemalloc_ep download command succeeded.  See also /tmp/arrow-archery-pnrk14xg/653817301/build/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-download-*.log
[133/213] Performing configure step for 'jemalloc_ep'
-- jemalloc_ep configure command succeeded.  See also /tmp/arrow-archery-pnrk14xg/653817301/build/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-configure-*.log
[145/213] Performing build step for 'jemalloc_ep'
-- jemalloc_ep build command succeeded.  See also /tmp/arrow-archery-pnrk14xg/653817301/build/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-build-*.log
[147/213] Performing install step for 'jemalloc_ep'
-- jemalloc_ep install command succeeded.  See also /tmp/arrow-archery-pnrk14xg/653817301/build/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-install-*.log
[172/213] Linking CXX executable release/arrow-memory-pool-benchmark
FAILED: release/arrow-memory-pool-benchmark 
: && /usr/bin/ccache /usr/bin/clang++-8  -Qunused-arguments -fcolor-diagnostics -fuse-ld=gold -O3 -DNDEBUG  -Wall -Wno-unknown-warning-option -Wno-pass-failed -msse4.2  -O3 -DNDEBUG  -rdynamic src/arrow/CMakeFiles/arrow-memory-pool-benchmark.dir/memory_pool_benchmark.cc.o  -o release/arrow-memory-pool-benchmark  -Wl,-rpath,/tmp/arrow-archery-pnrk14xg/653817301/build/release:/home/wesm/miniconda/envs/archery/lib  /home/wesm/miniconda/envs/archery/lib/libbenchmark_main.a  /home/wesm/miniconda/envs/archery/lib/libbenchmark.a  release/libarrow_testing.so.100.0.0  release/libarrow.so.100.0.0  -ldl  /home/wesm/miniconda/envs/archery/lib/libgtest_main.so  /home/wesm/miniconda/envs/archery/lib/libgtest.so  /home/wesm/miniconda/envs/archery/lib/libgmock.so  -ldl  jemalloc_ep-prefix/src/jemalloc_ep/dist//lib/libjemalloc_pic.a  -lrt  -pthread && :
release/libarrow_testing.so.100.0.0: error: undefined reference to 'arrow::ipc::internal::json::ArrayFromJSON(std::shared_ptr<arrow::DataType> const&, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, std::shared_ptr<arrow::Array>*)'
release/libarrow_testing.so.100.0.0: error: undefined reference to 'arrow::ipc::internal::json::DictArrayFromJSON(std::shared_ptr<arrow::DataType> const&, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, std::shared_ptr<arrow::Array>*)'
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[173/213] Linking CXX executable release/arrow-io-memory-benchmark
FAILED: release/arrow-io-memory-benchmark 
: && /usr/bin/ccache /usr/bin/clang++-8  -Qunused-arguments -fcolor-diagnostics -fuse-ld=gold -O3 -DNDEBUG  -Wall -Wno-unknown-warning-option -Wno-pass-failed -msse4.2  -O3 -DNDEBUG  -rdynamic src/arrow/io/CMakeFiles/arrow-io-memory-benchmark.dir/memory_benchmark.cc.o  -o release/arrow-io-memory-benchmark  -Wl,-rpath,/tmp/arrow-archery-pnrk14xg/653817301/build/release:/home/wesm/miniconda/envs/archery/lib  /home/wesm/miniconda/envs/archery/lib/libbenchmark_main.a  /home/wesm/miniconda/envs/archery/lib/libbenchmark.a  release/libarrow_testing.so.100.0.0  release/libarrow.so.100.0.0  -ldl  /home/wesm/miniconda/envs/archery/lib/libgtest_main.so  /home/wesm/miniconda/envs/archery/lib/libgtest.so  /home/wesm/miniconda/envs/archery/lib/libgmock.so  -ldl  jemalloc_ep-prefix/src/jemalloc_ep/dist//lib/libjemalloc_pic.a  -lrt  -pthread && :
release/libarrow_testing.so.100.0.0: error: undefined reference to 'arrow::ipc::internal::json::ArrayFromJSON(std::shared_ptr<arrow::DataType> const&, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, std::shared_ptr<arrow::Array>*)'
release/libarrow_testing.so.100.0.0: error: undefined reference to 'arrow::ipc::internal::json::DictArrayFromJSON(std::shared_ptr<arrow::DataType> const&, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, std::shared_ptr<arrow::Array>*)'
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[174/213] Linking CXX executable release/arrow-bridge-benchmark
FAILED: release/arrow-bridge-benchmark 
: && /usr/bin/ccache /usr/bin/clang++-8  -Qunused-arguments -fcolor-diagnostics -fuse-ld=gold -O3 -DNDEBUG  -Wall -Wno-unknown-warning-option -Wno-pass-failed -msse4.2  -O3 -DNDEBUG  -rdynamic src/arrow/c/CMakeFiles/arrow-bridge-benchmark.dir/bridge_benchmark.cc.o  -o release/arrow-bridge-benchmark  -Wl,-rpath,/tmp/arrow-archery-pnrk14xg/653817301/build/release:/home/wesm/miniconda/envs/archery/lib  /home/wesm/miniconda/envs/archery/lib/libbenchmark_main.a  /home/wesm/miniconda/envs/archery/lib/libbenchmark.a  release/libarrow_testing.so.100.0.0  release/libarrow.so.100.0.0  -ldl  /home/wesm/miniconda/envs/archery/lib/libgtest_main.so  /home/wesm/miniconda/envs/archery/lib/libgtest.so  /home/wesm/miniconda/envs/archery/lib/libgmock.so  -ldl  jemalloc_ep-prefix/src/jemalloc_ep/dist//lib/libjemalloc_pic.a  -lrt  -pthread && :
release/libarrow_testing.so.100.0.0: error: undefined reference to 'arrow::ipc::internal::json::ArrayFromJSON(std::shared_ptr<arrow::DataType> const&, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, std::shared_ptr<arrow::Array>*)'
release/libarrow_testing.so.100.0.0: error: undefined reference to 'arrow::ipc::internal::json::DictArrayFromJSON(std::shared_ptr<arrow::DataType> const&, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, std::shared_ptr<arrow::Array>*)'
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[175/213] Linking CXX executable release/arrow-io-file-benchmark
FAILED: release/arrow-io-file-benchmark 
: && /usr/bin/ccache /usr/bin/clang++-8  -Qunused-arguments -fcolor-diagnostics -fuse-ld=gold -O3 -DNDEBUG  -Wall -Wno-unknown-warning-option -Wno-pass-failed -msse4.2  -O3 -DNDEBUG  -rdynamic src/arrow/io/CMakeFiles/arrow-io-file-benchmark.dir/file_benchmark.cc.o  -o release/arrow-io-file-benchmark  -Wl,-rpath,/tmp/arrow-archery-pnrk14xg/653817301/build/release:/home/wesm/miniconda/envs/archery/lib  /home/wesm/miniconda/envs/archery/lib/libbenchmark_main.a  /home/wesm/miniconda/envs/archery/lib/libbenchmark.a  release/libarrow_testing.so.100.0.0  release/libarrow.so.100.0.0  -ldl  /home/wesm/miniconda/envs/archery/lib/libgtest_main.so  /home/wesm/miniconda/envs/archery/lib/libgtest.so  /home/wesm/miniconda/envs/archery/lib/libgmock.so  -ldl  jemalloc_ep-prefix/src/jemalloc_ep/dist//lib/libjemalloc_pic.a  -lrt  -pthread && :
release/libarrow_testing.so.100.0.0: error: undefined reference to 'arrow::ipc::internal::json::ArrayFromJSON(std::shared_ptr<arrow::DataType> const&, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, std::shared_ptr<arrow::Array>*)'
release/libarrow_testing.so.100.0.0: error: undefined reference to 'arrow::ipc::internal::json::DictArrayFromJSON(std::shared_ptr<arrow::DataType> const&, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, nonstd::sv_lite::basic_string_view<char, std::char_traits<char> >, std::shared_ptr<arrow::Array>*)'
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[189/213] Building CXX object src/arrow/compute/kernels/CMakeFiles/arrow-compute-scalar-arithmetic-benchmark.dir/scalar_arithmetic_benchmark.cc.o
ninja: build stopped: subcommand failed.
Traceback (most recent call last):
  File "/home/wesm/miniconda/envs/archery/bin/archery", line 33, in <module>
    sys.exit(load_entry_point('archery', 'console_scripts', 'archery')())
  File "/home/wesm/miniconda/envs/archery/lib/python3.8/site-packages/click/core.py", line 829, in __call__
    return self.main(*args, **kwargs)
  File "/home/wesm/miniconda/envs/archery/lib/python3.8/site-packages/click/core.py", line 782, in main
    rv = self.invoke(ctx)
  File "/home/wesm/miniconda/envs/archery/lib/python3.8/site-packages/click/core.py", line 1259, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/home/wesm/miniconda/envs/archery/lib/python3.8/site-packages/click/core.py", line 1259, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/home/wesm/miniconda/envs/archery/lib/python3.8/site-packages/click/core.py", line 1066, in invoke
    return ctx.invoke(self.callback, **ctx.params)
  File "/home/wesm/miniconda/envs/archery/lib/python3.8/site-packages/click/core.py", line 610, in invoke
    return callback(*args, **kwargs)
  File "/home/wesm/miniconda/envs/archery/lib/python3.8/site-packages/click/decorators.py", line 21, in new_func
    return f(get_current_context(), *args, **kwargs)
  File "/home/wesm/code/arrow/dev/archery/archery/cli.py", line 573, in benchmark_diff
    comparisons_json = _get_comparisons_as_json(runner_comp.comparisons)
  File "/home/wesm/code/arrow/dev/archery/archery/cli.py", line 580, in _get_comparisons_as_json
    for comparator in comparisons:
  File "/home/wesm/code/arrow/dev/archery/archery/benchmark/compare.py", line 164, in comparisons
    for suite_name, (suite_cont, suite_base) in suites:
  File "/home/wesm/code/arrow/dev/archery/archery/benchmark/compare.py", line 139, in pairwise_compare
    dict_contender = {e.name: e for e in contender}
  File "/home/wesm/code/arrow/dev/archery/archery/benchmark/compare.py", line 139, in <dictcomp>
    dict_contender = {e.name: e for e in contender}
  File "/home/wesm/code/arrow/dev/archery/archery/benchmark/runner.py", line 182, in suites
    suite_and_binaries = self.suites_binaries
  File "/home/wesm/code/arrow/dev/archery/archery/benchmark/runner.py", line 152, in suites_binaries
    self.build()
  File "/home/wesm/code/arrow/dev/archery/archery/utils/command.py", line 83, in __call__
    return self.run(*argv, **kwargs)
  File "/home/wesm/code/arrow/dev/archery/archery/utils/cmake.py", line 160, in run
    return super().run(*cmake_args, *extra,
  File "/home/wesm/code/arrow/dev/archery/archery/utils/command.py", line 74, in run
    return subprocess.run(invocation, **kwargs)
  File "/home/wesm/miniconda/envs/archery/lib/python3.8/subprocess.py", line 512, in run
    raise CalledProcessError(retcode, process.args,
subprocess.CalledProcessError: Command '['cmake', '--build', '/tmp/arrow-archery-pnrk14xg/653817301/build', '--']' returned non-zero exit status 1.