-
-
Save whalebot-helmsman/28b875cc0edb2bd6f69bffbad3a02162 to your computer and use it in GitHub Desktop.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| /home/adergachev/ve/brl33/lib/python3.3/site-packages/sklearn/utils/fixes.py:200: UserWarning: Using `sort` instead of partition.Upgrade numpy to 1.8 for better performace on large numberof clusters | |
| warnings.warn('Using `sort` instead of partition.' | |
| [Parallel(n_jobs=16)]: Done 30 out of 30 | elapsed: 1.1s remaining: 0.0s | |
| [Parallel(n_jobs=16)]: Done 30 out of 30 | elapsed: 1.1s finished | |
| [Parallel(n_jobs=16)]: Done 29 out of 29 | elapsed: 0.9s finished | |
| [Parallel(n_jobs=16)]: Done 26 out of 28 | elapsed: 0.9s remaining: 0.1s | |
| [Parallel(n_jobs=16)]: Done 28 out of 28 | elapsed: 0.9s finished | |
| [Parallel(n_jobs=16)]: Done 24 out of 27 | elapsed: 0.6s remaining: 0.1s | |
| [Parallel(n_jobs=16)]: Done 27 out of 27 | elapsed: 0.6s finished | |
| [Parallel(n_jobs=16)]: Done 22 out of 26 | elapsed: 1.0s remaining: 0.2s | |
| [Parallel(n_jobs=16)]: Done 26 out of 26 | elapsed: 1.0s finished | |
| [Parallel(n_jobs=16)]: Done 20 out of 25 | elapsed: 0.7s remaining: 0.2s | |
| [Parallel(n_jobs=16)]: Done 25 out of 25 | elapsed: 0.9s finished | |
| [Parallel(n_jobs=16)]: Done 18 out of 24 | elapsed: 0.9s remaining: 0.3s | |
| [Parallel(n_jobs=16)]: Done 24 out of 24 | elapsed: 0.9s finished | |
| [Parallel(n_jobs=16)]: Done 16 out of 23 | elapsed: 1.0s remaining: 0.4s | |
| [Parallel(n_jobs=16)]: Done 23 out of 23 | elapsed: 1.5s finished | |
| [Parallel(n_jobs=16)]: Done 14 out of 22 | elapsed: 1.0s remaining: 0.6s | |
| [Parallel(n_jobs=16)]: Done 22 out of 22 | elapsed: 1.2s finished | |
| [Parallel(n_jobs=16)]: Done 12 out of 21 | elapsed: 0.5s remaining: 0.4s | |
| [Parallel(n_jobs=16)]: Done 21 out of 21 | elapsed: 0.7s finished | |
| [Parallel(n_jobs=16)]: Done 10 out of 20 | elapsed: 0.7s remaining: 0.7s | |
| [Parallel(n_jobs=16)]: Done 20 out of 20 | elapsed: 1.0s finished | |
| [Parallel(n_jobs=16)]: Done 8 out of 19 | elapsed: 0.8s remaining: 1.1s | |
| [Parallel(n_jobs=16)]: Done 19 out of 19 | elapsed: 1.2s finished | |
| [Parallel(n_jobs=16)]: Done 6 out of 18 | elapsed: 0.4s remaining: 0.8s | |
| [Parallel(n_jobs=16)]: Done 18 out of 18 | elapsed: 0.8s finished | |
| real 0m15.290s | |
| user 2m41.787s | |
| sys 0m4.919s | |
| /home/adergachev/ve/brl33/lib/python3.3/site-packages/sklearn/utils/fixes.py:200: UserWarning: Using `sort` instead of partition.Upgrade numpy to 1.8 for better performace on large numberof clusters | |
| warnings.warn('Using `sort` instead of partition.' | |
| [Parallel(n_jobs=13)]: Done 30 out of 30 | elapsed: 1.1s finished | |
| [Parallel(n_jobs=13)]: Done 29 out of 29 | elapsed: 1.1s finished | |
| [Parallel(n_jobs=13)]: Done 28 out of 28 | elapsed: 1.2s finished | |
| [Parallel(n_jobs=13)]: Done 27 out of 27 | elapsed: 1.1s finished | |
| [Parallel(n_jobs=13)]: Done 26 out of 26 | elapsed: 0.8s finished | |
| [Parallel(n_jobs=13)]: Done 25 out of 25 | elapsed: 0.9s finished | |
| [Parallel(n_jobs=13)]: Done 24 out of 24 | elapsed: 1.0s remaining: 0.0s | |
| [Parallel(n_jobs=13)]: Done 24 out of 24 | elapsed: 1.0s finished | |
| [Parallel(n_jobs=13)]: Done 23 out of 23 | elapsed: 0.7s finished | |
| [Parallel(n_jobs=13)]: Done 20 out of 22 | elapsed: 1.2s remaining: 0.1s | |
| [Parallel(n_jobs=13)]: Done 22 out of 22 | elapsed: 1.2s finished | |
| [Parallel(n_jobs=13)]: Done 18 out of 21 | elapsed: 0.7s remaining: 0.1s | |
| [Parallel(n_jobs=13)]: Done 21 out of 21 | elapsed: 0.9s finished | |
| [Parallel(n_jobs=13)]: Done 16 out of 20 | elapsed: 0.8s remaining: 0.2s | |
| [Parallel(n_jobs=13)]: Done 20 out of 20 | elapsed: 1.1s finished | |
| [Parallel(n_jobs=13)]: Done 14 out of 19 | elapsed: 1.1s remaining: 0.4s | |
| [Parallel(n_jobs=13)]: Done 19 out of 19 | elapsed: 1.3s finished | |
| [Parallel(n_jobs=13)]: Done 12 out of 18 | elapsed: 0.7s remaining: 0.3s | |
| [Parallel(n_jobs=13)]: Done 18 out of 18 | elapsed: 1.4s finished | |
| real 0m16.124s | |
| user 2m21.974s | |
| sys 0m4.174s | |
| /home/adergachev/ve/brl33/lib/python3.3/site-packages/sklearn/utils/fixes.py:200: UserWarning: Using `sort` instead of partition.Upgrade numpy to 1.8 for better performace on large numberof clusters | |
| warnings.warn('Using `sort` instead of partition.' | |
| [Parallel(n_jobs=10)]: Done 30 out of 30 | elapsed: 1.2s finished | |
| [Parallel(n_jobs=10)]: Done 29 out of 29 | elapsed: 0.9s finished | |
| [Parallel(n_jobs=10)]: Done 28 out of 28 | elapsed: 1.1s finished | |
| [Parallel(n_jobs=10)]: Done 27 out of 27 | elapsed: 1.7s finished | |
| [Parallel(n_jobs=10)]: Done 26 out of 26 | elapsed: 1.3s finished | |
| [Parallel(n_jobs=10)]: Done 25 out of 25 | elapsed: 1.2s finished | |
| [Parallel(n_jobs=10)]: Done 24 out of 24 | elapsed: 1.2s finished | |
| [Parallel(n_jobs=10)]: Done 23 out of 23 | elapsed: 1.5s finished | |
| [Parallel(n_jobs=10)]: Done 22 out of 22 | elapsed: 1.0s finished | |
| [Parallel(n_jobs=10)]: Done 21 out of 21 | elapsed: 1.0s finished | |
| [Parallel(n_jobs=10)]: Done 20 out of 20 | elapsed: 1.1s finished | |
| [Parallel(n_jobs=10)]: Done 19 out of 19 | elapsed: 0.7s finished | |
| [Parallel(n_jobs=10)]: Done 18 out of 18 | elapsed: 0.8s remaining: 0.0s | |
| [Parallel(n_jobs=10)]: Done 18 out of 18 | elapsed: 0.8s finished | |
| real 0m17.070s | |
| user 2m7.443s | |
| sys 0m3.887s | |
| /home/adergachev/ve/brl33/lib/python3.3/site-packages/sklearn/utils/fixes.py:200: UserWarning: Using `sort` instead of partition.Upgrade numpy to 1.8 for better performace on large numberof clusters | |
| warnings.warn('Using `sort` instead of partition.' | |
| [Parallel(n_jobs=7)]: Done 30 out of 30 | elapsed: 1.2s finished | |
| [Parallel(n_jobs=7)]: Done 29 out of 29 | elapsed: 1.2s finished | |
| [Parallel(n_jobs=7)]: Done 28 out of 28 | elapsed: 1.6s finished | |
| [Parallel(n_jobs=7)]: Done 27 out of 27 | elapsed: 1.2s finished | |
| [Parallel(n_jobs=7)]: Done 26 out of 26 | elapsed: 1.7s finished | |
| [Parallel(n_jobs=7)]: Done 25 out of 25 | elapsed: 1.5s finished | |
| [Parallel(n_jobs=7)]: Done 24 out of 24 | elapsed: 1.6s finished | |
| [Parallel(n_jobs=7)]: Done 23 out of 23 | elapsed: 1.3s finished | |
| [Parallel(n_jobs=7)]: Done 22 out of 22 | elapsed: 1.3s finished | |
| [Parallel(n_jobs=7)]: Done 21 out of 21 | elapsed: 1.5s finished | |
| [Parallel(n_jobs=7)]: Done 20 out of 20 | elapsed: 1.7s finished | |
| [Parallel(n_jobs=7)]: Done 19 out of 19 | elapsed: 1.1s finished | |
| [Parallel(n_jobs=7)]: Done 18 out of 18 | elapsed: 1.1s finished | |
| real 0m20.468s | |
| user 1m55.413s | |
| sys 0m3.665s | |
| /home/adergachev/ve/brl33/lib/python3.3/site-packages/sklearn/utils/fixes.py:200: UserWarning: Using `sort` instead of partition.Upgrade numpy to 1.8 for better performace on large numberof clusters | |
| warnings.warn('Using `sort` instead of partition.' | |
| [Parallel(n_jobs=4)]: Done 30 out of 30 | elapsed: 2.4s finished | |
| [Parallel(n_jobs=4)]: Done 29 out of 29 | elapsed: 2.3s finished | |
| [Parallel(n_jobs=4)]: Done 28 out of 28 | elapsed: 2.2s finished | |
| [Parallel(n_jobs=4)]: Done 27 out of 27 | elapsed: 2.2s finished | |
| [Parallel(n_jobs=4)]: Done 26 out of 26 | elapsed: 2.8s finished | |
| [Parallel(n_jobs=4)]: Done 25 out of 25 | elapsed: 2.3s finished | |
| [Parallel(n_jobs=4)]: Done 24 out of 24 | elapsed: 2.5s finished | |
| [Parallel(n_jobs=4)]: Done 23 out of 23 | elapsed: 2.1s finished | |
| [Parallel(n_jobs=4)]: Done 22 out of 22 | elapsed: 2.5s finished | |
| [Parallel(n_jobs=4)]: Done 21 out of 21 | elapsed: 1.9s finished | |
| [Parallel(n_jobs=4)]: Done 20 out of 20 | elapsed: 2.2s finished | |
| [Parallel(n_jobs=4)]: Done 19 out of 19 | elapsed: 1.7s finished | |
| [Parallel(n_jobs=4)]: Done 18 out of 18 | elapsed: 1.8s finished | |
| real 0m30.832s | |
| user 1m50.622s | |
| sys 0m3.253s | |
| /home/adergachev/ve/brl33/lib/python3.3/site-packages/sklearn/utils/fixes.py:200: UserWarning: Using `sort` instead of partition.Upgrade numpy to 1.8 for better performace on large numberof clusters | |
| warnings.warn('Using `sort` instead of partition.' | |
| [Parallel(n_jobs=1)]: Done 30 out of 30 | elapsed: 6.4s finished | |
| [Parallel(n_jobs=1)]: Done 29 out of 29 | elapsed: 7.0s finished | |
| [Parallel(n_jobs=1)]: Done 28 out of 28 | elapsed: 7.1s finished | |
| [Parallel(n_jobs=1)]: Done 27 out of 27 | elapsed: 7.3s finished | |
| [Parallel(n_jobs=1)]: Done 26 out of 26 | elapsed: 7.0s finished | |
| [Parallel(n_jobs=1)]: Done 25 out of 25 | elapsed: 6.9s finished | |
| [Parallel(n_jobs=1)]: Done 24 out of 24 | elapsed: 7.0s finished | |
| [Parallel(n_jobs=1)]: Done 23 out of 23 | elapsed: 7.0s finished | |
| [Parallel(n_jobs=1)]: Done 22 out of 22 | elapsed: 6.9s finished | |
| [Parallel(n_jobs=1)]: Done 21 out of 21 | elapsed: 6.7s finished | |
| [Parallel(n_jobs=1)]: Done 20 out of 20 | elapsed: 6.5s finished | |
| [Parallel(n_jobs=1)]: Done 19 out of 19 | elapsed: 6.5s finished | |
| [Parallel(n_jobs=1)]: Done 18 out of 18 | elapsed: 6.2s finished | |
| real 1m29.465s | |
| user 1m29.510s | |
| sys 0m2.769s |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| import sys | |
| from mlxtend.feature_selection import SequentialFeatureSelector | |
| from sklearn.datasets import load_breast_cancer | |
| from sklearn.ensemble import GradientBoostingClassifier | |
| def main(): | |
| n_jobs = int(sys.argv[1]) | |
| cancer = load_breast_cancer() | |
| X, y = cancer.data, cancer.target | |
| lr = GradientBoostingClassifier() | |
| sfs_r = SequentialFeatureSelector(lr, | |
| k_features=13, | |
| forward=True, | |
| floating=False, | |
| scoring='neg_mean_squared_error', | |
| cv=3, | |
| skip_if_stuck=True, | |
| n_jobs=n_jobs, | |
| verbose=1) | |
| sfs_r = sfs_r.fit(X, y) | |
| if __name__ == "__main__": | |
| main() |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment