wjrl
/ adjToSif.py
Last active
February 10, 2017 08:19
Converts adjacency matrix text file to a .sif file and a .noa file for node layout
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| #!/usr/bin/env python | |
| import csv | |
| import sys | |
| import os | |
| if len(sys.argv) != 3: | |
| sys.exit('Usage: [python] adjToSif.py linkTag inFile') | |
| linkTag = sys.argv[1] | |
| fileName = sys.argv[2] |
wjrl
/ igraphToSif.R
Last active
June 12, 2017 01:53
Export igraph graph from R as SIF file for import into BioFabric
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| # if you don't have igraph: | |
| #install.packages("igraph") | |
| library(igraph) | |
| # | |
| # We only work with graphs that have node name attributes! If | |
| # graph does not already have them, apply this function to it! | |
| # |