Created
February 22, 2023 17:11
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Stack trace for Java heap space error in Cromwell
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[ERROR] [02/22/2023 17:09:59.597] [cromwell-system-akka.dispatchers.service-dispatcher-51] [akka://cromwell-system/user/cromwell-service/ServiceRegistryActor/MetadataService/WriteMetadataActor] WriteMetadataActor Failed to properly process data | |
java.sql.SQLException: java.lang.OutOfMemoryError: Java heap space | |
at org.hsqldb.jdbc.JDBCUtil.sqlException(Unknown Source) | |
at org.hsqldb.jdbc.JDBCUtil.sqlException(Unknown Source) | |
at org.hsqldb.jdbc.JDBCPreparedStatement.fetchResult(Unknown Source) | |
at org.hsqldb.jdbc.JDBCPreparedStatement.executeUpdate(Unknown Source) | |
at com.zaxxer.hikari.pool.ProxyPreparedStatement.executeUpdate(ProxyPreparedStatement.java:61) | |
at com.zaxxer.hikari.pool.HikariProxyPreparedStatement.executeUpdate(HikariProxyPreparedStatement.java) | |
at slick.jdbc.JdbcActionComponent$InsertActionComposerImpl$MultiInsertAction.$anonfun$run$17(JdbcActionComponent.scala:533) | |
at slick.jdbc.JdbcBackend$SessionDef.withPreparedStatement(JdbcBackend.scala:427) | |
at slick.jdbc.JdbcBackend$SessionDef.withPreparedStatement$(JdbcBackend.scala:422) | |
at slick.jdbc.JdbcBackend$BaseSession.withPreparedStatement(JdbcBackend.scala:491) | |
at slick.jdbc.JdbcActionComponent$InsertActionComposerImpl.preparedInsert(JdbcActionComponent.scala:511) | |
at slick.jdbc.JdbcActionComponent$InsertActionComposerImpl$MultiInsertAction.$anonfun$run$16(JdbcActionComponent.scala:530) | |
at scala.collection.Iterator$$anon$9.next(Iterator.scala:577) | |
at scala.collection.IterableOnceOps.copyToArray(IterableOnce.scala:874) | |
at scala.collection.IterableOnceOps.copyToArray$(IterableOnce.scala:869) | |
at scala.collection.AbstractIterator.copyToArray(Iterator.scala:1293) | |
at scala.collection.IterableOnceOps.copyToArray(IterableOnce.scala:835) | |
at scala.collection.IterableOnceOps.copyToArray$(IterableOnce.scala:835) | |
at scala.collection.AbstractIterator.copyToArray(Iterator.scala:1293) | |
at scala.collection.immutable.Vector$.from(Vector.scala:54) | |
at scala.collection.IterableOnceOps.toVector(IterableOnce.scala:1253) | |
at scala.collection.IterableOnceOps.toVector$(IterableOnce.scala:1253) | |
at scala.collection.AbstractIterator.toVector(Iterator.scala:1293) | |
at slick.jdbc.JdbcActionComponent$InsertActionComposerImpl$MultiInsertAction.run(JdbcActionComponent.scala:529) | |
at slick.jdbc.JdbcActionComponent$SimpleJdbcProfileAction.run(JdbcActionComponent.scala:28) | |
at slick.jdbc.JdbcActionComponent$SimpleJdbcProfileAction.run(JdbcActionComponent.scala:25) | |
at slick.dbio.DBIOAction$$anon$1.$anonfun$run$1(DBIOAction.scala:186) | |
at scala.collection.immutable.Vector.foreach(Vector.scala:1856) | |
at slick.dbio.DBIOAction$$anon$1.run(DBIOAction.scala:186) | |
at slick.dbio.DBIOAction$$anon$1.run(DBIOAction.scala:183) | |
at slick.dbio.SynchronousDatabaseAction$$anon$7.run(DBIOAction.scala:486) | |
at slick.basic.BasicBackend$DatabaseDef$$anon$3.liftedTree1$1(BasicBackend.scala:276) | |
at slick.basic.BasicBackend$DatabaseDef$$anon$3.run(BasicBackend.scala:276) | |
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) | |
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) | |
at java.base/java.lang.Thread.run(Thread.java:833) | |
Caused by: org.hsqldb.HsqlException: java.lang.OutOfMemoryError: Java heap space | |
at org.hsqldb.error.Error.error(Unknown Source) | |
at org.hsqldb.SessionData.allocateLobForResult(Unknown Source) | |
at org.hsqldb.Session.allocateResultLob(Unknown Source) | |
at org.hsqldb.jdbc.JDBCPreparedStatement.performPreExecute(Unknown Source) | |
... 34 more | |
Caused by: java.lang.OutOfMemoryError: Java heap space |
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