siggraph 2013 demo

gistfile1.txt

papers & scientific projects
*jogl

http://mcsem.com/learn-about-mcsem/ -  Electromagnetic (EM) methods for hydrocarbon exploration
http://mcsem.com/bci-geophysics/ - brain controlled
http://mcsem.com/download/ - CSEMoMatic This software is built upon Kerry Key’s Dipole1D algorithm  and JOGL2

http://cs.lnu.se/isovis/pubs/docs/kerren-vda12-8294-0N.pdf - Visualization of Mappings between the Gene Ontologyand Cluster Trees
(22:34:08) xranby: using JogAmp JOGL to visualize the mappings

university JogAmp JOGL course:
http://beta.wikiversity.org/wiki/Computer_graphics_--_2008-2009_--_info.uvt.ro/Laboratory_agenda

http://symbolicalgebra.etf.bg.ac.rs/bb_master/indexEn.html -Visualisation in theory of Groebners basis
http://symbolicalgebra.etf.bg.ac.rs/bb_master/Dokumentacija.pdf

http://www.plosone.org/article/info:doi/10.1371/journal.pone.0013361 - Detection and Alignment of 3D Domain Swapping Proteins Using Angle-Distance Image-Based Secondary Structural Matching Techniques



*jocl
http://www.uni-marburg.de/fb12/kebi/people/tomsfolder/ieee-dest.pdf - "a  novel  approach  to significantly speed up the computation times of the SEGA algorithm for a structural comparison of protein binding sites by using the digital ecosystem of a GPU-based Cloud computing infrastructure.  The original CPU-based Java version of SEGA has  been  rewritten  in  OpenCL  to  run  on  NVIDIA  GPUs  in parallel on a set of Amazon EC2 Cluster GPU Instances."  "The described framework has been implemented in Java using the JogAmp JOCL library [7] for controlling the OpenCL platform."
GPU-based Cloud Computing for Comparing the Structure of Protein Binding Sites

processing examples online, test with processing 2
http://www.informatik.uni-oldenburg.de/~trigger/page4.html
http://www.informatik.uni-oldenburg.de/~trigger/content/flower_effect/processing/index.html
http://www.informatik.uni-oldenburg.de/~trigger/content/flower_effect/flower_effect_explained.pdf

games:
http://www.salemthegame.com/ - MMO using JogAmp