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yarikoptic/nonlabile-segfault-valgrind.log

Created April 9, 2010 19:49
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nonlabile-segfault-valgrind.log
==2427== Memcheck, a memory error detector
==2427== Copyright (C) 2002-2009, and GNU GPL'd, by Julian Seward et al.
==2427== Using Valgrind-3.5.0-Debian and LibVEX; rerun with -h for copyright info
==2427== Command: /usr/bin/python mvpa/tests/__init__.py
==2427==
T: MVPA_SEED=53827600
T: Testing for availability of external software packages.
WARNING: running ipython env is not available.
* Please note: warnings are printed only once, but underlying problem might occur many times *
WARNING: lars is not available.
WARNING: nibabel is not available.
WARNING: shogun.svrlight is not available.
WARNING: elasticnet is not available.
WARNING: good scipy.stats.rdist is not available.
WARNING: rpy2 is not available.
WARNING: weave is not available.
WARNING: glmnet is not available.
WARNING: shogun.lightsvm is not available.
WARNING: pywt wp reconstruct fixed is not available.
test_externals (mvpa.tests.test_externals.TestExternals) ... ok
test_externals_correct2nd_invocation (mvpa.tests.test_externals.TestExternals) ... ok
test_externals_no_double_invocation (mvpa.tests.test_externals.TestExternals) ... ok
Very basic testing -- just to see if it doesn't crash ... ok
test_basic (mvpa.tests.test_dochelpers.DochelpersTests) ... ok
test_borrow_doc (mvpa.tests.test_dochelpers.DochelpersTests) ... ok
test_borrow_kwargs (mvpa.tests.test_dochelpers.DochelpersTests) ... ok
test_searchlight_doc (mvpa.tests.test_dochelpers.DochelpersTests) ... ok
test_simple_som (mvpa.tests.test_som.SOMMapperTests) ... ok
test_blank_state (mvpa.tests.test_state.StateTests) ... ok
test_deep_copying_state_variable (mvpa.tests.test_state.StateTests) ... ok
Check if we can store/restore set of enabled ca ... ok
test_parametrized (mvpa.tests.test_state.StateTests) ... ok
test_proper_state (mvpa.tests.test_state.StateTests) ... ok
Simple test if child gets conditional attributes from the parent as well ... ok
test_read_only (mvpa.tests.test_state.StateTests) ... ok
To test new ca ... ok
test_stored_temporarily (mvpa.tests.test_state.StateTests) ... ok
test_value_in_constructor (mvpa.tests.test_state.StateTests) ... ok
test_blank (mvpa.tests.test_params.ParamsTests) ... ok
test_classifier (mvpa.tests.test_params.ParamsTests) ... ok
test_mixed (mvpa.tests.test_params.ParamsTests) ... ok
test_simple (mvpa.tests.test_params.ParamsTests) ... ok
test_config (mvpa.tests.test_config.ConfigTests) ... ok
test_asobjarray (mvpa.tests.test_support.SupportFxTests) ... ok
test_break_points (mvpa.tests.test_support.SupportFxTests) ... ok
test_correlation (mvpa.tests.test_support.SupportFxTests) ... ok
test_event (mvpa.tests.test_support.SupportFxTests) ... ok
test_id_hash (mvpa.tests.test_support.SupportFxTests) ... ok
test_map_overlap (mvpa.tests.test_support.SupportFxTests) ... ok
test_mof_n_combinations (mvpa.tests.test_support.SupportFxTests) ... ok
Test our ad-hoc SmartVersion ... ok
test_transform_with_boxcar (mvpa.tests.test_support.SupportFxTests) ... ok
Test conversion of versions from strings ... ok
mvpa.tests.test_support.test_value2idx ... ok
Test if works fine with carriage return (cr) symbol ... ok
test_debug (mvpa.tests.test_verbosity.VerboseOutputTest) ... ok
test_debug_rgexp (mvpa.tests.test_verbosity.VerboseOutputTest) ... ok
Test error message ... ok
Test if it works fine with no newline (LF) symbol ... ok
Test once logger ... ok
Test if it doesn't output at higher levels ... ok
Test if outputs at lower levels and indents ... ok
Test indent symbol ... ok
Test if chokes on negative level ... ok
Test all available reports, real or dummy for just working ... ==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0xBFE4290: inflateReset2 (inflate.c:157)
==2427== by 0xBFE437F: inflateInit2_ (inflate.c:193)
==2427== by 0xBBA6CA1: ImagingZipDecode (in /usr/lib/python2.5/site-packages/PIL/_imaging.so)
==2427== by 0xBB87F4B: ??? (in /usr/lib/python2.5/site-packages/PIL/_imaging.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427==
ok
Test if we are not missing basic parts ... ok
Test if we are not missing basic parts ... ok
Test the group_kwargs decorator ... ok
test_tuebingen_meg (mvpa.tests.test_meg.MEGTests) ... ==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0xBFE4290: inflateReset2 (inflate.c:157)
==2427== by 0xBFE437F: inflateInit2_ (inflate.c:193)
==2427== by 0x1B15098B: ??? (in /usr/lib/python2.5/lib-dynload/zlib.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427==
ok
test_binary_decorator (mvpa.tests.test_clf.ClassifiersTests) ... ok
test_boosted (mvpa.tests.test_clf.ClassifiersTests) ... ok
test_boosted_state_propagation (mvpa.tests.test_clf.ClassifiersTests) ... ok
Simple test if classifiers can generalize ok on simple data ... ok
To check if known/present Classifiers are working properly ... ok
Simple test if a learner could cope with custom sa not targets ... ==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x4319BE: PyInt_FromLong (in /usr/bin/python2.5)
==2427== by 0x1950657E: _wrap_int_getitem (svmc_wrap.cpp:2905)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x487A82: PyEval_CallObjectWithKeywords (in /usr/bin/python2.5)
==2427== by 0x485494: ??? (in /usr/bin/python2.5)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427==
==2427== Use of uninitialised value of size 8
==2427== at 0x4319F8: PyInt_FromLong (in /usr/bin/python2.5)
==2427== by 0x1950657E: _wrap_int_getitem (svmc_wrap.cpp:2905)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x487A82: PyEval_CallObjectWithKeywords (in /usr/bin/python2.5)
==2427== by 0x485494: ??? (in /usr/bin/python2.5)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427==
==2427== Use of uninitialised value of size 8
==2427== at 0x570C66B: _itoa_word (_itoa.c:195)
==2427== by 0x570E1F0: vfprintf (vfprintf.c:1600)
==2427== by 0x5731761: vsnprintf (vsnprintf.c:120)
==2427== by 0x4AABFC: PyOS_snprintf (in /usr/bin/python2.5)
==2427== by 0x43143C: ??? (in /usr/bin/python2.5)
==2427== by 0x448754: PyObject_Repr (in /usr/bin/python2.5)
==2427== by 0x437E14: ??? (in /usr/bin/python2.5)
==2427== by 0x448754: PyObject_Repr (in /usr/bin/python2.5)
==2427== by 0x48AAF7: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x570C675: _itoa_word (_itoa.c:195)
==2427== by 0x570E1F0: vfprintf (vfprintf.c:1600)
==2427== by 0x5731761: vsnprintf (vsnprintf.c:120)
==2427== by 0x4AABFC: PyOS_snprintf (in /usr/bin/python2.5)
==2427== by 0x43143C: ??? (in /usr/bin/python2.5)
==2427== by 0x448754: PyObject_Repr (in /usr/bin/python2.5)
==2427== by 0x437E14: ??? (in /usr/bin/python2.5)
==2427== by 0x448754: PyObject_Repr (in /usr/bin/python2.5)
==2427== by 0x48AAF7: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x570F7AD: vfprintf (vfprintf.c:1600)
==2427== by 0x5731761: vsnprintf (vsnprintf.c:120)
==2427== by 0x4AABFC: PyOS_snprintf (in /usr/bin/python2.5)
==2427== by 0x43143C: ??? (in /usr/bin/python2.5)
==2427== by 0x448754: PyObject_Repr (in /usr/bin/python2.5)
==2427== by 0x437E14: ??? (in /usr/bin/python2.5)
==2427== by 0x448754: PyObject_Repr (in /usr/bin/python2.5)
==2427== by 0x48AAF7: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x570E319: vfprintf (vfprintf.c:1600)
==2427== by 0x5731761: vsnprintf (vsnprintf.c:120)
==2427== by 0x4AABFC: PyOS_snprintf (in /usr/bin/python2.5)
==2427== by 0x43143C: ??? (in /usr/bin/python2.5)
==2427== by 0x448754: PyObject_Repr (in /usr/bin/python2.5)
==2427== by 0x437E14: ??? (in /usr/bin/python2.5)
==2427== by 0x448754: PyObject_Repr (in /usr/bin/python2.5)
==2427== by 0x48AAF7: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x6F1BA2E: PyArray_MapIterReset (arrayobject.c:10915)
==2427== by 0x6F4DBEE: array_subscript (arrayobject.c:2643)
==2427== by 0x6F4FC6F: array_subscript_nice (arrayobject.c:3336)
==2427== by 0x48A6CE: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48D4EA: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427==
ok
Test how clf handles degenerate cases ... ok
test_dummy (mvpa.tests.test_clf.ClassifiersTests) ... ok
test_feature_selection_classifier (mvpa.tests.test_clf.ClassifiersTests) ... ok
test_feature_selection_classifier_with_regression (mvpa.tests.test_clf.ClassifiersTests) ... ok
Test all classifiers for conformant behavior ... ok
Basic testing of harvesting based on SplitClassifier ... ok
test_mapped_classifier (mvpa.tests.test_clf.ClassifiersTests) ... ok
test_multiclass_classifier (mvpa.tests.test_clf.ClassifiersTests) ... ok
Basic tests of metaclass for using regressions as classifiers ... ok
test_retrainables (mvpa.tests.test_clf.ClassifiersTests) ... ok
test_split_classifier (mvpa.tests.test_clf.ClassifiersTests) ... ok
test_split_classifier_extended (mvpa.tests.test_clf.ClassifiersTests) ... ok
Basic testing of the clf summary ... ok
test_svms (mvpa.tests.test_clf.ClassifiersTests) ... ok
Basic tests for TreeClassifier ... ok
test_values (mvpa.tests.test_clf.ClassifiersTests) ... ok
Test If binary regression-based classifiers have proper tag ... ok
Simple tests on regressions ... ok
Simple tests on regressions being used as classifiers ... ok
Test "sensitivities" provided by regressions ... ok
test_knn_state (mvpa.tests.test_knn.KNNTests) ... ok
test_multivariate (mvpa.tests.test_knn.KNNTests) ... ok
test_gnb (mvpa.tests.test_gnb.GNBTests) ... ok
test_cper_class (mvpa.tests.test_svm.SVMTests) ... ok
test_multivariate (mvpa.tests.test_svm.SVMTests) ... ok
Test if we raise exceptions on incorrect specifications ... ok
test_plr (mvpa.tests.test_plr.PLRTests) ... ok
test_plr_state (mvpa.tests.test_plr.PLRTests) ... ok
test_smlr (mvpa.tests.test_smlr.SMLRTests) ... ok
test_smlr_sensitivities (mvpa.tests.test_smlr.SMLRTests) ... ok
test_smlr_state (mvpa.tests.test_smlr.SMLRTests) ... ok
test_more_svd (mvpa.tests.test_svdmapper.SVDMapperTests) ... ok
test_simple_svd (mvpa.tests.test_svdmapper.SVDMapperTests) ... ok
test_simple (mvpa.tests.test_procrust.ProcrusteanMapperTests) ... ok
test_basic_functioning (mvpa.tests.test_hyperalignment.HyperAlignmentTests) ... ok
test_absolute (mvpa.tests.test_transformers.TransformerTests) ... ok
test_absolute2 (mvpa.tests.test_transformers.TransformerTests) ... ok
Basic testing of DistPValue ... ok
test_first_axis_sum_not_zero (mvpa.tests.test_transformers.TransformerTests) ... ok
test_l1_norm (mvpa.tests.test_transformers.TransformerTests) ... ok
test_l2_norm (mvpa.tests.test_transformers.TransformerTests) ... ok
test_over_axis (mvpa.tests.test_transformers.TransformerTests) ... ok
test_rank_order (mvpa.tests.test_transformers.TransformerTests) ... ok
test_1d_multispace_searchlight (mvpa.tests.test_searchlight.SearchlightTests) ... ok
test_chi_square_searchlight (mvpa.tests.test_searchlight.SearchlightTests) ... ==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 81,837,677 bytes in 68,203 blocks
==2427== total heap usage: 15,741,682 allocs, 15,673,479 frees, 13,308,685,664 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 92,192 bytes in 313 blocks
==2427== possibly lost: 40,069,229 bytes in 39,837 blocks
==2427== still reachable: 41,600,636 bytes in 27,586 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 141447 from 786)
==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 81,834,454 bytes in 68,196 blocks
==2427== total heap usage: 15,741,670 allocs, 15,673,474 frees, 13,308,682,437 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 92,192 bytes in 313 blocks
==2427== possibly lost: 40,068,106 bytes in 39,853 blocks
==2427== still reachable: 41,598,536 bytes in 27,563 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 141442 from 786)
ok
test_partial_searchlight_with_full_report (mvpa.tests.test_searchlight.SearchlightTests) ... ==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 81,817,409 bytes in 67,840 blocks
==2427== total heap usage: 15,734,899 allocs, 15,667,059 frees, 13,306,873,677 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 92,192 bytes in 313 blocks
==2427== possibly lost: 40,051,873 bytes in 39,494 blocks
==2427== still reachable: 41,597,724 bytes in 27,566 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 141830 from 787)
==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 81,818,880 bytes in 67,843 blocks
==2427== total heap usage: 15,735,032 allocs, 15,667,189 frees, 13,306,900,545 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 92,192 bytes in 313 blocks
==2427== possibly lost: 40,266,357 bytes in 40,042 blocks
==2427== still reachable: 41,384,711 bytes in 27,021 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 141860 from 786)
ok
Tests both generic and GNBSearchlight ... ==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 81,905,922 bytes in 68,020 blocks
==2427== total heap usage: 16,094,827 allocs, 16,026,807 frees, 13,494,350,370 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 94,592 bytes in 314 blocks
==2427== possibly lost: 40,323,551 bytes in 40,143 blocks
==2427== still reachable: 41,412,159 bytes in 27,096 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 145327 from 798)
==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 81,907,297 bytes in 68,023 blocks
==2427== total heap usage: 16,094,948 allocs, 16,026,925 frees, 13,494,368,248 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 94,592 bytes in 314 blocks
==2427== possibly lost: 40,307,454 bytes in 40,100 blocks
==2427== still reachable: 41,429,631 bytes in 27,142 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 145270 from 799)
==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 82,028,690 bytes in 69,131 blocks
==2427== total heap usage: 16,160,358 allocs, 16,091,227 frees, 13,515,458,084 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 94,592 bytes in 314 blocks
==2427== possibly lost: 40,524,512 bytes in 40,474 blocks
==2427== still reachable: 41,333,966 bytes in 27,876 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 146364 from 802)
==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 82,027,314 bytes in 69,128 blocks
==2427== total heap usage: 16,160,238 allocs, 16,091,110 frees, 13,515,440,482 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 94,592 bytes in 314 blocks
==2427== possibly lost: 40,524,232 bytes in 40,477 blocks
==2427== still reachable: 41,332,870 bytes in 27,870 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 146270 from 803)
==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 81,936,362 bytes in 68,078 blocks
==2427== total heap usage: 16,174,305 allocs, 16,106,227 frees, 13,517,933,802 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 94,592 bytes in 314 blocks
==2427== possibly lost: 40,346,239 bytes in 40,177 blocks
==2427== still reachable: 41,419,911 bytes in 27,120 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 147778 from 804)
==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 81,935,042 bytes in 68,075 blocks
==2427== total heap usage: 16,174,185 allocs, 16,106,110 frees, 13,517,916,557 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 94,592 bytes in 314 blocks
==2427== possibly lost: 40,477,456 bytes in 40,439 blocks
==2427== still reachable: 41,287,374 bytes in 26,855 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 147782 from 800)
==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 82,027,818 bytes in 69,128 blocks
==2427== total heap usage: 16,239,539 allocs, 16,170,411 frees, 13,538,976,961 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 94,592 bytes in 314 blocks
==2427== possibly lost: 40,402,903 bytes in 40,241 blocks
==2427== still reachable: 41,454,703 bytes in 28,106 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 148920 from 804)
==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 82,029,138 bytes in 69,131 blocks
==2427== total heap usage: 16,239,658 allocs, 16,170,527 frees, 13,538,993,941 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 75,620 bytes in 467 blocks
==2427== indirectly lost: 94,592 bytes in 314 blocks
==2427== possibly lost: 40,535,280 bytes in 40,499 blocks
==2427== still reachable: 41,323,646 bytes in 27,851 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 753 errors from 9 contexts (suppressed: 148892 from 804)
ok
test_best_detector (mvpa.tests.test_rfe.RFETests) ... ok
test_feature_selection_pipeline (mvpa.tests.test_rfe.RFETests) ... ok
Test feature selector ... ok
Test stopping criterion ... ok
test_james_problem (mvpa.tests.test_rfe.RFETests) ... ok
Test multiple stop criteria ... ok
Test stopping criterion ... ok
Test stopping criterion ... ok
test_rfe (mvpa.tests.test_rfe.RFETests) ... ok
test_sensitivity_based_feature_selection (mvpa.tests.test_rfe.RFETests) ... ok
test_ifs (mvpa.tests.test_ifs.IFSTests) ... ok
test_perturbation_sensitivity_analyzer (mvpa.tests.test_perturbsensana.PerturbationSensitivityAnalyzerTests) ... ok
test_docstrings (mvpa.tests.test_suite.SuiteTest) ... ok
Test if we are loading fine ... ok
test_ridge_reg (mvpa.tests.test_ridge.RidgeRegTests) ... ok
test_ridge_reg_state (mvpa.tests.test_ridge.RidgeRegTests) ... ok
test_basic (mvpa.tests.test_gpr.GPRTests) ... ok
test_linear (mvpa.tests.test_gpr.GPRTests) ... ok
test_assignment (mvpa.tests.test_hamster.HamsterHelperTests) ... ok
test_simple_storage (mvpa.tests.test_hamster.HamsterHelperTests) ... ok
test_specification (mvpa.tests.test_hamster.HamsterHelperTests) ... ok
mvpa.tests.test_collections.test_basic_collectable ... ok
mvpa.tests.test_collections.test_array_collectable ... ok
mvpa.tests.test_collections.test_collections ... ok
mvpa.tests.test_attrmap.test_attrmap ... ok
mvpa.tests.test_attrmap.test_attrmap_conflicts ... ok
mvpa.tests.test_attrmap.test_attrmap_repr ... ok
mvpa.tests.test_datasetng.test_from_wizard ... ok
mvpa.tests.test_datasetng.test_labelschunks_access ... ok
mvpa.tests.test_datasetng.test_ex_from_masked ... ok
mvpa.tests.test_datasetng.test_shape_conversion ... ok
mvpa.tests.test_datasetng.test_multidim_attrs ... ok
mvpa.tests.test_datasetng.test_samples_shape ... ok
mvpa.tests.test_datasetng.test_basic_datamapping ... ok
mvpa.tests.test_datasetng.test_ds_shallowcopy ... ok
mvpa.tests.test_datasetng.test_ds_deepcopy ... ok
mvpa.tests.test_datasetng.test_mergeds ... ok
Additional tests for hstacking of datasets ... ok
Test composition of new datasets by addition of existing ones ... ok
mvpa.tests.test_datasetng.test_combined_samplesfeature_selection ... ok
mvpa.tests.test_datasetng.test_labelpermutation_randomsampling ... ok
mvpa.tests.test_datasetng.test_masked_featureselection ... ok
mvpa.tests.test_datasetng.test_origmask_extraction ... ok
mvpa.tests.test_datasetng.test_feature_masking ... ok
mvpa.tests.test_datasetng.test_origid_handling ... ok
mvpa.tests.test_datasetng.test_idhash ... ok
mvpa.tests.test_datasetng.test_arrayattributes ... ok
mvpa.tests.test_datasetng.test_repr ... ok
mvpa.tests.test_datasetng.test_str ... ok
mvpa.tests.test_datasetng.test_other_samples_dtypes ... ok
mvpa.tests.test_datasetng.test_dataset_summary ... ok
mvpa.tests.test_datasetng.test_h5py_io ... ok
test_aggregation (mvpa.tests.test_datasetfx.MiscDatasetFxTests) ... ok
test_binds (mvpa.tests.test_datasetfx.MiscDatasetFxTests) ... ok
Just basic testing for now ... ok
test_invar_features_removal (mvpa.tests.test_datasetfx.MiscDatasetFxTests) ... ok
Test sequence statistics ... ok
test_counted_splitting (mvpa.tests.test_splitter.SplitterTests) ... ok
test_custom_split (mvpa.tests.test_splitter.SplitterTests) ... ok
test_discarded_boundaries (mvpa.tests.test_splitter.SplitterTests) ... ok
test_half_split (mvpa.tests.test_splitter.SplitterTests) ... ok
test_label_splitter (mvpa.tests.test_splitter.SplitterTests) ... ok
Test NGroupSplitter alongside with the reversal of the ... ok
test_none_splitter (mvpa.tests.test_splitter.SplitterTests) ... ok
test_odd_even_split (mvpa.tests.test_splitter.SplitterTests) ... ok
test_simplest_cv_pat_gen (mvpa.tests.test_splitter.SplitterTests) ... ok
test_slicing (mvpa.tests.test_splitter.SplitterTests) ... ok
Basic testing of NiftiDataset ... ==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0xBFE4290: inflateReset2 (inflate.c:157)
==2427== by 0xBFE437F: inflateInit2_ (inflate.c:193)
==2427== by 0xBFDDC86: gz_open (gzio.c:186)
==2427== by 0x1B7C3838: znzopen (in /usr/lib/libznz.so.1.1.0)
==2427== by 0x1B5AB9C4: nifti_fileexists (in /usr/lib/libniftiio.so.1.1.0)
==2427== by 0x1B5AE797: nifti_findhdrname (in /usr/lib/libniftiio.so.1.1.0)
==2427== by 0x1B5B7D07: nifti_image_read (in /usr/lib/libniftiio.so.1.1.0)
==2427== by 0x1B37651B: ??? (in /usr/lib/python-support/python-nifti/python2.5/nifti/_clib.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6A7C: ??? (in /usr/bin/python2.5)
==2427==
==2427== Invalid read of size 4
==2427== at 0x1B5AA8B1: nifti_free_extensions (in /usr/lib/libniftiio.so.1.1.0)
==2427== by 0x1B37904C: ??? (in /usr/lib/python-support/python-nifti/python2.5/nifti/_clib.so)
==2427== by 0x48EB10: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x487A82: PyEval_CallObjectWithKeywords (in /usr/bin/python2.5)
==2427== by 0x464A0B: ??? (in /usr/bin/python2.5)
==2427== by 0x45C817: ??? (in /usr/bin/python2.5)
==2427== Address 0x14ad6720 is 672 bytes inside a block of size 696 free'd
==2427== at 0x4C21DBC: free (vg_replace_malloc.c:325)
==2427== by 0x1B37B9BC: ??? (in /usr/lib/python-support/python-nifti/python2.5/nifti/_clib.so)
==2427== by 0x48EB10: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48D4EA: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427==
==2427== Invalid read of size 8
==2427== at 0x1B5AA960: nifti_free_extensions (in /usr/lib/libniftiio.so.1.1.0)
==2427== by 0x1B37904C: ??? (in /usr/lib/python-support/python-nifti/python2.5/nifti/_clib.so)
==2427== by 0x48EB10: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x487A82: PyEval_CallObjectWithKeywords (in /usr/bin/python2.5)
==2427== by 0x464A0B: ??? (in /usr/bin/python2.5)
==2427== by 0x45C817: ??? (in /usr/bin/python2.5)
==2427== Address 0x14ad6728 is 680 bytes inside a block of size 696 free'd
==2427== at 0x4C21DBC: free (vg_replace_malloc.c:325)
==2427== by 0x1B37B9BC: ??? (in /usr/lib/python-support/python-nifti/python2.5/nifti/_clib.so)
==2427== by 0x48EB10: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48D4EA: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427==
==2427== Invalid write of size 4
==2427== at 0x1B5AA913: nifti_free_extensions (in /usr/lib/libniftiio.so.1.1.0)
==2427== by 0x1B37904C: ??? (in /usr/lib/python-support/python-nifti/python2.5/nifti/_clib.so)
==2427== by 0x48EB10: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x487A82: PyEval_CallObjectWithKeywords (in /usr/bin/python2.5)
==2427== by 0x464A0B: ??? (in /usr/bin/python2.5)
==2427== by 0x45C817: ??? (in /usr/bin/python2.5)
==2427== Address 0x14ad6720 is 672 bytes inside a block of size 696 free'd
==2427== at 0x4C21DBC: free (vg_replace_malloc.c:325)
==2427== by 0x1B37B9BC: ??? (in /usr/lib/python-support/python-nifti/python2.5/nifti/_clib.so)
==2427== by 0x48EB10: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48D4EA: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427==
==2427== Invalid write of size 8
==2427== at 0x1B5AA91F: nifti_free_extensions (in /usr/lib/libniftiio.so.1.1.0)
==2427== by 0x1B37904C: ??? (in /usr/lib/python-support/python-nifti/python2.5/nifti/_clib.so)
==2427== by 0x48EB10: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x487A82: PyEval_CallObjectWithKeywords (in /usr/bin/python2.5)
==2427== by 0x464A0B: ??? (in /usr/bin/python2.5)
==2427== by 0x45C817: ??? (in /usr/bin/python2.5)
==2427== Address 0x14ad6728 is 680 bytes inside a block of size 696 free'd
==2427== at 0x4C21DBC: free (vg_replace_malloc.c:325)
==2427== by 0x1B37B9BC: ??? (in /usr/lib/python-support/python-nifti/python2.5/nifti/_clib.so)
==2427== by 0x48EB10: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48D4EA: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427==
ok
mvpa.tests.test_niftidataset.test_fmridataset ... ok
Basic testing of map2Nifti ... ok
Test if doing exactly the same operation twice yields the same result ... ok
mvpa.tests.test_niftidataset.test_er_nifti_dataset ... ==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x6F1ED99: PyArray_UpdateFlags (arrayobject.c:5440)
==2427== by 0x6F36EF8: PyArray_Newshape (multiarraymodule.c:861)
==2427== by 0x6F374D8: array_reshape (arraymethods.c:94)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x6F1ED99: PyArray_UpdateFlags (arrayobject.c:5440)
==2427== by 0x6F2A261: array_big_item (arrayobject.c:2183)
==2427== by 0x6F4FA6E: array_item_nice (arrayobject.c:2199)
==2427== by 0x6F4FE3A: array_subscript_nice (arrayobject.c:3309)
==2427== by 0x48A6CE: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x6F1EE82: PyArray_UpdateFlags (arrayobject.c:5590)
==2427== by 0x6F2A390: array_slice (arrayobject.c:4375)
==2427== by 0x48E4EC: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x45FF6D: ??? (in /usr/bin/python2.5)
==2427== by 0x469B7A: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48D4EA: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427==
ok
Some mapping testing -- more tests is better ... ok
Test NiftiDataset based on 3D volume(s) ... ok
mvpa.tests.test_eepdataset.test_eep_load ... ok
mvpa.tests.test_eepdataset.test_eep_bin ... ok
mvpa.tests.test_erdataset.test_erdataset ... ok
mvpa.tests.test_neighborhood.test_distances ... ok
mvpa.tests.test_neighborhood.test_sphere ... ok
mvpa.tests.test_neighborhood.test_sphere_distance_func ... ok
mvpa.tests.test_neighborhood.test_sphere_scaled ... ok
mvpa.tests.test_neighborhood.test_query_engine ... ok
Test cached query engine ... ok
Do some extended testing of OneWayAnova ... ok
Testing null dist probability ... ok
Do some extended testing of OneWayAnova ... ok
Testing null dist probability ... ok
test_anova_compliance (mvpa.tests.test_stats_sp.StatsTestsScipy) ... ok
Test if binomial distribution works ok ... ok
Test chi-square distribution ... ok
test_chi_square_disbalanced (mvpa.tests.test_stats_sp.StatsTestsScipy) ... ok
Test estimation of measures statistics ... ok
Test GLM ... ok
Some really basic testing for match_distribution ... ok
Basic testing of the sign in p and t scores ... ok
Test 'any' tail statistics estimation ... ok
Test either rdist distribution performs nicely ... ok
mvpa.tests.test_mapper.test_flatten ... ok
mvpa.tests.test_mapper.test_subset ... ok
mvpa.tests.test_mapper.test_subset_filler ... ok
mvpa.tests.test_mapper.test_repr ... ok
mvpa.tests.test_mapper.test_chainmapper ... ok
mvpa.tests.test_mapper_sp.test_polydetrend ... ok
mvpa.tests.test_arraymapper.test_forward_dense_array_mapper ... ok
mvpa.tests.test_arraymapper.test_reverse_dense_array_mapper ... ok
mvpa.tests.test_arraymapper.test_mapper_aliases ... ok
mvpa.tests.test_arraymapper.test_selects ... ok
mvpa.tests.test_boxcarmapper.test_simpleboxcar ... ok
mvpa.tests.test_boxcarmapper.test_datasetmapping ... ok
test_size (mvpa.tests.test_prototypemapper.PrototypeMapperTests) ... ok
test_size_random_prototypes (mvpa.tests.test_prototypemapper.PrototypeMapperTests) ... ok
test_streamline_equal_mapper (mvpa.tests.test_prototypemapper.PrototypeMapperTests) ... ok
test_streamline_random_mapper (mvpa.tests.test_prototypemapper.PrototypeMapperTests) ... ok
test_symmetry (mvpa.tests.test_prototypemapper.PrototypeMapperTests) ... ok
mvpa.tests.test_fxmapper.test_samplesgroup_mapper ... ok
mvpa.tests.test_fxmapper.test_featuregroup_mapper ... ok
mvpa.tests.test_fxmapper.test_fxmapper ... ok
mvpa.tests.test_fxmapper.test_features01 ... ok
Test by comparing to results of elderly z-score function ... ok
mvpa.tests.test_zscoremapper.test_zcore_repr ... ok
Test z-scoring transformation ... ok
test_simple_wdm (mvpa.tests.test_waveletmapper.WaveletMappersTests) ... ok
test_simple_wp1_level (mvpa.tests.test_waveletmapper.WaveletMappersTests) ... SKIP: External pywt wp reconstruct fixed is not present thus tests battery skipped
mvpa.tests.test_mdp.test_mdpnodemapper ... ok
mvpa.tests.test_mdp.test_mdpflowmapper ... ok
mvpa.tests.test_mdp.test_mdpflow_additional_arguments ... ok
mvpa.tests.test_mdp.test_mdpflow_additional_arguments_nones ... ok
mvpa.tests.test_mdp.test_pcamapper ... ok
mvpa.tests.test_mdp.test_icamapper ... ok
mvpa.tests.test_mdp.test_llemapper ... ok
Disabled the test since we have no SpAM yet ... SKIP: skipped SPaM since no SPaM
test_cached_kernel (mvpa.tests.test_kernel.KernelTests) ... ok
test_custom_sg (mvpa.tests.test_kernel.KernelTests) ... ok
Euclidean distance kernel testing ... ok
Simplistic testing of linear kernel ... ok
test_linear_sg (mvpa.tests.test_kernel.KernelTests) ... ok
test_pnorm_w (mvpa.tests.test_kernel.KernelTests) ... ok
test_poly_sg (mvpa.tests.test_kernel.KernelTests) ... ok
Statistic Kernels ... ok
test_rbf_sg (mvpa.tests.test_kernel.KernelTests) ... ok
test_sg_conversions (mvpa.tests.test_kernel.KernelTests) ... ok
test_basic_clf_train_predict (mvpa.tests.test_svmkernels.SVMKernelTests) ... ok
test_cache_speedup (mvpa.tests.test_svmkernels.SVMKernelTests) ... ok
test_cached_kernel_different_datasets (mvpa.tests.test_svmkernels.SVMKernelTests) ... ok
test_vstack_and_origids_issue (mvpa.tests.test_svmkernels.SVMKernelTests) ... ok
mvpa.tests.test_emp_null.test_efdr ... ok
test_harvesting (mvpa.tests.test_clfcrossval.CrossValidationTests) ... ok
test_noise_classification (mvpa.tests.test_clfcrossval.CrossValidationTests) ... ok
test_simple_n_minus_one_cv (mvpa.tests.test_clfcrossval.CrossValidationTests) ... ok
Simple testing of reading RTC files from BrainVoyager ... ok
test_column_data_from_file (mvpa.tests.test_iohelpers.IOHelperTests) ... ok
test_fsl_ev (mvpa.tests.test_iohelpers.IOHelperTests) ... ok
test_fsl_ev2 (mvpa.tests.test_iohelpers.IOHelperTests) ... ok
test_fsl_glm_design (mvpa.tests.test_iohelpers.IOHelperTests) ... ok
test_samples_attributes (mvpa.tests.test_iohelpers.IOHelperTests) ... ok
test_sensor_locations (mvpa.tests.test_iohelpers.IOHelperTests) ... ok
Simple testing of helper Design2Labels ... ok
testlabels2chunks (mvpa.tests.test_iohelpers.IOHelperTests) ... ok
mvpa.tests.test_hdf5.test_h5py_datasets ... ok
mvpa.tests.test_hdf5.test_h5py_dataset_typecheck ... ok
mvpa.tests.test_hdf5.test_matfile_v73_compat ... ok
mvpa.tests.test_hdf5.test_directaccess ... ok
mvpa.tests.test_hdf5.test_function_ptrs ... ==2427== Invalid read of size 1
==2427== at 0x6F1A114: STRING_getitem (arraytypes.inc.src:365)
==2427== by 0x6F38FFE: array_toscalar (arraymethods.c:516)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48EC8E: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x464C21: ??? (in /usr/bin/python2.5)
==2427== by 0x48A6CE: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== Address 0x2927be9f is 1 bytes before a block of size 1 alloc'd
==2427== at 0x4C221A7: malloc (vg_replace_malloc.c:195)
==2427== by 0x6F29E92: PyArray_NewFromDescr (arrayobject.c:5960)
==2427== by 0x6F2C245: array_new (arrayobject.c:6428)
==2427== by 0x469A22: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48D4EA: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x464C21: ??? (in /usr/bin/python2.5)
==2427==
ok
mvpa.tests.test_hdf5.test_0d_object_ndarray ... ok
mvpa.tests.test_hdf5.test_class_oldstyle ... ok
mvpa.tests.test_hdf5.test_locally_defined_class ... ok
mvpa.tests.test_hdf5.test_dataset_without_chunks ... ==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0xBFE4290: inflateReset2 (inflate.c:157)
==2427== by 0xBFE437F: inflateInit2_ (inflate.c:193)
==2427== by 0x1BF20504: ??? (in /usr/lib/libhdf5.so.6.0.3)
==2427== by 0x1BF1F477: H5Z_pipeline (in /usr/lib/libhdf5.so.6.0.3)
==2427== by 0x1BC7CFD1: H5D_chunk_lock (in /usr/lib/libhdf5.so.6.0.3)
==2427== by 0x1BC7A9A9: ??? (in /usr/lib/libhdf5.so.6.0.3)
==2427== by 0x1BC97E18: ??? (in /usr/lib/libhdf5.so.6.0.3)
==2427== by 0x1BC96EC7: H5Dread (in /usr/lib/libhdf5.so.6.0.3)
==2427== by 0x1B9D905D: H5PY_dset_rw (in /usr/lib/python2.5/site-packages/h5py/h5.so)
==2427== by 0x1B9CD9A0: ??? (in /usr/lib/python2.5/site-packages/h5py/h5.so)
==2427== by 0x1D5C4F0A: ??? (in /usr/lib/python2.5/site-packages/h5py/h5d.so)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427==
ok
mvpa.tests.test_hdf5.test_recursion ... ok
mvpa.tests.test_hdf5_clf.test_h5py_clfs ... SKIP: 26 tests were skipped in testing test_h5py_clfs
Test AUC computation ... ok
test_confusion_based_error (mvpa.tests.test_transerror.ErrorsTests) ... ok
test_confusion_matrix (mvpa.tests.test_transerror.ErrorsTests) ... ok
test_confusion_matrix_acc (mvpa.tests.test_transerror.ErrorsTests) ... ok
test_confusion_matrix_with_mappings (mvpa.tests.test_transerror.ErrorsTests) ... ok
Basic test of confusion plot ... ==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x192A7B84: agg::math_stroke<agg::pod_bvector<agg::point_base<double>, 6u> >::calc_cap(agg::pod_bvector<agg::point_base<double>, 6u>&, agg::vertex_dist const&, agg::vertex_dist const&, double) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192A714A: agg::vcgen_stroke::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D029C: agg::conv_adaptor_vcgen<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>, agg::vcgen_stroke, agg::null_markers>::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192DFDF9: void RendererAgg::_draw_path<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4> >(agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>&, bool, std::pair<bool, agg::rgba> const&, GCAgg const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192E1528: Py::Object RendererAgg::_draw_path_collection_generic<PathListGenerator, 0, 1>(agg::trans_affine, Py::Object const&, Py::Object const&, agg::trans_affine const&, PathListGenerator const&, Py::SeqBase<Py::Object> const&, Py::Object const&, agg::trans_affine const&, Py::Object const&, Py::Object const&, Py::SeqBase<Py::Float> const&, Py::SeqBase<Py::Object> const&, Py::SeqBase<Py::Int> const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192BCDFF: RendererAgg::draw_path_collection(Py::Tuple const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D5CFC: Py::PythonExtension<RendererAgg>::method_varargs_call_handler(_object*, _object*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48C6D6: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x192A7B8D: agg::math_stroke<agg::pod_bvector<agg::point_base<double>, 6u> >::calc_cap(agg::pod_bvector<agg::point_base<double>, 6u>&, agg::vertex_dist const&, agg::vertex_dist const&, double) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192A714A: agg::vcgen_stroke::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D029C: agg::conv_adaptor_vcgen<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>, agg::vcgen_stroke, agg::null_markers>::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192DFDF9: void RendererAgg::_draw_path<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4> >(agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>&, bool, std::pair<bool, agg::rgba> const&, GCAgg const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192E1528: Py::Object RendererAgg::_draw_path_collection_generic<PathListGenerator, 0, 1>(agg::trans_affine, Py::Object const&, Py::Object const&, agg::trans_affine const&, PathListGenerator const&, Py::SeqBase<Py::Object> const&, Py::Object const&, agg::trans_affine const&, Py::Object const&, Py::Object const&, Py::SeqBase<Py::Float> const&, Py::SeqBase<Py::Object> const&, Py::SeqBase<Py::Int> const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192BCDFF: RendererAgg::draw_path_collection(Py::Tuple const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D5CFC: Py::PythonExtension<RendererAgg>::method_varargs_call_handler(_object*, _object*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48C6D6: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x192A9106: agg::math_stroke<agg::pod_bvector<agg::point_base<double>, 6u> >::calc_join(agg::pod_bvector<agg::point_base<double>, 6u>&, agg::vertex_dist const&, agg::vertex_dist const&, agg::vertex_dist const&, double, double) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192A7208: agg::vcgen_stroke::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D029C: agg::conv_adaptor_vcgen<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>, agg::vcgen_stroke, agg::null_markers>::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192DFDF9: void RendererAgg::_draw_path<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4> >(agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>&, bool, std::pair<bool, agg::rgba> const&, GCAgg const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192E1528: Py::Object RendererAgg::_draw_path_collection_generic<PathListGenerator, 0, 1>(agg::trans_affine, Py::Object const&, Py::Object const&, agg::trans_affine const&, PathListGenerator const&, Py::SeqBase<Py::Object> const&, Py::Object const&, agg::trans_affine const&, Py::Object const&, Py::Object const&, Py::SeqBase<Py::Float> const&, Py::SeqBase<Py::Object> const&, Py::SeqBase<Py::Int> const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192BCDFF: RendererAgg::draw_path_collection(Py::Tuple const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D5CFC: Py::PythonExtension<RendererAgg>::method_varargs_call_handler(_object*, _object*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48C6D6: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x192A9110: agg::math_stroke<agg::pod_bvector<agg::point_base<double>, 6u> >::calc_join(agg::pod_bvector<agg::point_base<double>, 6u>&, agg::vertex_dist const&, agg::vertex_dist const&, agg::vertex_dist const&, double, double) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192A7208: agg::vcgen_stroke::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D029C: agg::conv_adaptor_vcgen<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>, agg::vcgen_stroke, agg::null_markers>::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192DFDF9: void RendererAgg::_draw_path<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4> >(agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>&, bool, std::pair<bool, agg::rgba> const&, GCAgg const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192E1528: Py::Object RendererAgg::_draw_path_collection_generic<PathListGenerator, 0, 1>(agg::trans_affine, Py::Object const&, Py::Object const&, agg::trans_affine const&, PathListGenerator const&, Py::SeqBase<Py::Object> const&, Py::Object const&, agg::trans_affine const&, Py::Object const&, Py::Object const&, Py::SeqBase<Py::Float> const&, Py::SeqBase<Py::Object> const&, Py::SeqBase<Py::Int> const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192BCDFF: RendererAgg::draw_path_collection(Py::Tuple const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D5CFC: Py::PythonExtension<RendererAgg>::method_varargs_call_handler(_object*, _object*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48C6D6: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x192A9116: agg::math_stroke<agg::pod_bvector<agg::point_base<double>, 6u> >::calc_join(agg::pod_bvector<agg::point_base<double>, 6u>&, agg::vertex_dist const&, agg::vertex_dist const&, agg::vertex_dist const&, double, double) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192A7208: agg::vcgen_stroke::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D029C: agg::conv_adaptor_vcgen<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>, agg::vcgen_stroke, agg::null_markers>::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192DFDF9: void RendererAgg::_draw_path<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4> >(agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>&, bool, std::pair<bool, agg::rgba> const&, GCAgg const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192E1528: Py::Object RendererAgg::_draw_path_collection_generic<PathListGenerator, 0, 1>(agg::trans_affine, Py::Object const&, Py::Object const&, agg::trans_affine const&, PathListGenerator const&, Py::SeqBase<Py::Object> const&, Py::Object const&, agg::trans_affine const&, Py::Object const&, Py::Object const&, Py::SeqBase<Py::Float> const&, Py::SeqBase<Py::Object> const&, Py::SeqBase<Py::Int> const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192BCDFF: RendererAgg::draw_path_collection(Py::Tuple const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D5CFC: Py::PythonExtension<RendererAgg>::method_varargs_call_handler(_object*, _object*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48C6D6: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x192A9120: agg::math_stroke<agg::pod_bvector<agg::point_base<double>, 6u> >::calc_join(agg::pod_bvector<agg::point_base<double>, 6u>&, agg::vertex_dist const&, agg::vertex_dist const&, agg::vertex_dist const&, double, double) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192A7208: agg::vcgen_stroke::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D029C: agg::conv_adaptor_vcgen<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>, agg::vcgen_stroke, agg::null_markers>::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192DFDF9: void RendererAgg::_draw_path<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4> >(agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>&, bool, std::pair<bool, agg::rgba> const&, GCAgg const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192E1528: Py::Object RendererAgg::_draw_path_collection_generic<PathListGenerator, 0, 1>(agg::trans_affine, Py::Object const&, Py::Object const&, agg::trans_affine const&, PathListGenerator const&, Py::SeqBase<Py::Object> const&, Py::Object const&, agg::trans_affine const&, Py::Object const&, Py::Object const&, Py::SeqBase<Py::Float> const&, Py::SeqBase<Py::Object> const&, Py::SeqBase<Py::Int> const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192BCDFF: RendererAgg::draw_path_collection(Py::Tuple const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D5CFC: Py::PythonExtension<RendererAgg>::method_varargs_call_handler(_object*, _object*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48C6D6: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x192A7B84: agg::math_stroke<agg::pod_bvector<agg::point_base<double>, 6u> >::calc_cap(agg::pod_bvector<agg::point_base<double>, 6u>&, agg::vertex_dist const&, agg::vertex_dist const&, double) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192A7108: agg::vcgen_stroke::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D029C: agg::conv_adaptor_vcgen<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>, agg::vcgen_stroke, agg::null_markers>::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192DFDF9: void RendererAgg::_draw_path<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4> >(agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>&, bool, std::pair<bool, agg::rgba> const&, GCAgg const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192E1528: Py::Object RendererAgg::_draw_path_collection_generic<PathListGenerator, 0, 1>(agg::trans_affine, Py::Object const&, Py::Object const&, agg::trans_affine const&, PathListGenerator const&, Py::SeqBase<Py::Object> const&, Py::Object const&, agg::trans_affine const&, Py::Object const&, Py::Object const&, Py::SeqBase<Py::Float> const&, Py::SeqBase<Py::Object> const&, Py::SeqBase<Py::Int> const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192BCDFF: RendererAgg::draw_path_collection(Py::Tuple const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D5CFC: Py::PythonExtension<RendererAgg>::method_varargs_call_handler(_object*, _object*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48C6D6: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x192A7B8D: agg::math_stroke<agg::pod_bvector<agg::point_base<double>, 6u> >::calc_cap(agg::pod_bvector<agg::point_base<double>, 6u>&, agg::vertex_dist const&, agg::vertex_dist const&, double) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192A7108: agg::vcgen_stroke::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D029C: agg::conv_adaptor_vcgen<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>, agg::vcgen_stroke, agg::null_markers>::vertex(double*, double*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192DFDF9: void RendererAgg::_draw_path<agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4> >(agg::conv_curve<PathClipper<PathNanRemover<agg::conv_transform<PathIterator, agg::trans_affine> > >, agg::curve3, agg::curve4>&, bool, std::pair<bool, agg::rgba> const&, GCAgg const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192E1528: Py::Object RendererAgg::_draw_path_collection_generic<PathListGenerator, 0, 1>(agg::trans_affine, Py::Object const&, Py::Object const&, agg::trans_affine const&, PathListGenerator const&, Py::SeqBase<Py::Object> const&, Py::Object const&, agg::trans_affine const&, Py::Object const&, Py::Object const&, Py::SeqBase<Py::Float> const&, Py::SeqBase<Py::Object> const&, Py::SeqBase<Py::Int> const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192BCDFF: RendererAgg::draw_path_collection(Py::Tuple const&) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x192D5CFC: Py::PythonExtension<RendererAgg>::method_varargs_call_handler(_object*, _object*) (in /usr/lib/pyshared/python2.5/matplotlib/backends/_backend_agg.so)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x48C6D6: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427==
==2427== Use of uninitialised value of size 8
==2427== at 0x16B591FB: Tcl_CreateHashEntry (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167CA989: Tk_GetColorByValue (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16875DE8: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x168758EA: Tk_3DVerticalBevel (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167BF118: Tk_Draw3DRectangle (in /usr/lib/libtk8.5.so.0)
==2427== by 0x168768CE: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B9C495: TclServiceIdle (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B7F414: Tcl_DoOneEvent (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167C93AB: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B05FD2: ??? (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B062E2: Tcl_EvalObjv (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x1626580B: ??? (in /usr/lib/python2.5/lib-dynload/_tkinter.so)
==2427==
==2427== Use of uninitialised value of size 8
==2427== at 0x16B592A0: Tcl_CreateHashEntry (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167CA989: Tk_GetColorByValue (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16875DE8: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x168758EA: Tk_3DVerticalBevel (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167BF118: Tk_Draw3DRectangle (in /usr/lib/libtk8.5.so.0)
==2427== by 0x168768CE: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B9C495: TclServiceIdle (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B7F414: Tcl_DoOneEvent (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167C93AB: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B05FD2: ??? (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B062E2: Tcl_EvalObjv (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x1626580B: ??? (in /usr/lib/python2.5/lib-dynload/_tkinter.so)
==2427==
==2427== Use of uninitialised value of size 8
==2427== at 0x16B591FB: Tcl_CreateHashEntry (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167CA989: Tk_GetColorByValue (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16875E82: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x168758EA: Tk_3DVerticalBevel (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167BF118: Tk_Draw3DRectangle (in /usr/lib/libtk8.5.so.0)
==2427== by 0x168768CE: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B9C495: TclServiceIdle (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B7F414: Tcl_DoOneEvent (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167C93AB: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B05FD2: ??? (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B062E2: Tcl_EvalObjv (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x1626580B: ??? (in /usr/lib/python2.5/lib-dynload/_tkinter.so)
==2427==
==2427== Use of uninitialised value of size 8
==2427== at 0x16B592A0: Tcl_CreateHashEntry (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167CA989: Tk_GetColorByValue (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16875E82: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x168758EA: Tk_3DVerticalBevel (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167BF118: Tk_Draw3DRectangle (in /usr/lib/libtk8.5.so.0)
==2427== by 0x168768CE: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B9C495: TclServiceIdle (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B7F414: Tcl_DoOneEvent (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167C93AB: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B05FD2: ??? (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B062E2: Tcl_EvalObjv (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x1626580B: ??? (in /usr/lib/python2.5/lib-dynload/_tkinter.so)
==2427==
==2427== Use of uninitialised value of size 8
==2427== at 0x16B593E8: Tcl_DeleteHashEntry (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167CAC0E: Tk_FreeColor (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167BF318: Tk_Free3DBorder (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CC934: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CC7C6: Tk_FreeConfigOptions (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167F7873: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CFE02: Tk_HandleEvent (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167EC719: Tk_DestroyWindow (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167C8387: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B05FD2: ??? (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B062E2: Tcl_EvalObjv (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x1626580B: ??? (in /usr/lib/python2.5/lib-dynload/_tkinter.so)
==2427==
==2427== Use of uninitialised value of size 8
==2427== at 0x16B59486: Tcl_DeleteHashEntry (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167CAC0E: Tk_FreeColor (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167BF318: Tk_Free3DBorder (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CC934: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CC7C6: Tk_FreeConfigOptions (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167F7873: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CFE02: Tk_HandleEvent (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167EC719: Tk_DestroyWindow (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167C8387: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B05FD2: ??? (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B062E2: Tcl_EvalObjv (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x1626580B: ??? (in /usr/lib/python2.5/lib-dynload/_tkinter.so)
==2427==
==2427== Use of uninitialised value of size 8
==2427== at 0x16B593E8: Tcl_DeleteHashEntry (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167CAC0E: Tk_FreeColor (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167BF326: Tk_Free3DBorder (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CC934: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CC7C6: Tk_FreeConfigOptions (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167F7873: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CFE02: Tk_HandleEvent (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167EC719: Tk_DestroyWindow (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167C8387: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B05FD2: ??? (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B062E2: Tcl_EvalObjv (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x1626580B: ??? (in /usr/lib/python2.5/lib-dynload/_tkinter.so)
==2427==
==2427== Use of uninitialised value of size 8
==2427== at 0x16B59486: Tcl_DeleteHashEntry (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x167CAC0E: Tk_FreeColor (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167BF326: Tk_Free3DBorder (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CC934: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CC7C6: Tk_FreeConfigOptions (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167F7873: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167CFE02: Tk_HandleEvent (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167EC719: Tk_DestroyWindow (in /usr/lib/libtk8.5.so.0)
==2427== by 0x167C8387: ??? (in /usr/lib/libtk8.5.so.0)
==2427== by 0x16B05FD2: ??? (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x16B062E2: Tcl_EvalObjv (in /usr/lib/libtcl8.5.so.0)
==2427== by 0x1626580B: ??? (in /usr/lib/python2.5/lib-dynload/_tkinter.so)
==2427==
ok
test_confusion_plot2 (mvpa.tests.test_transerror.ErrorsTests) ... ok
test_degenerate_confusion (mvpa.tests.test_transerror.ErrorsTests) ... ok
test_null_dist_prob (mvpa.tests.test_transerror.ErrorsTests) ... ==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x6F1EE36: PyArray_UpdateFlags (arrayobject.c:5470)
==2427== by 0x6F36EF8: PyArray_Newshape (multiarraymodule.c:861)
==2427== by 0x6F374D8: array_reshape (arraymethods.c:94)
==2427== by 0x48DB17: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x6F1EE0A: PyArray_UpdateFlags (arrayobject.c:5470)
==2427== by 0x6F2A7E6: PyArray_Transpose (multiarraymodule.c:2252)
==2427== by 0x44797D: PyObject_GenericGetAttr (in /usr/bin/python2.5)
==2427== by 0x48BE67: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427==
==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0x6F1EDB7: PyArray_UpdateFlags (arrayobject.c:5440)
==2427== by 0x6F2A7E6: PyArray_Transpose (multiarraymodule.c:2252)
==2427== by 0x44797D: PyObject_GenericGetAttr (in /usr/bin/python2.5)
==2427== by 0x48BE67: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x48DEEF: PyEval_EvalFrameEx (in /usr/bin/python2.5)
==2427== by 0x48F4E0: PyEval_EvalCodeEx (in /usr/bin/python2.5)
==2427== by 0x4D6998: ??? (in /usr/bin/python2.5)
==2427== by 0x418492: PyObject_Call (in /usr/bin/python2.5)
==2427== by 0x41FA3E: ??? (in /usr/bin/python2.5)
==2427==
ok
test_per_sample_error (mvpa.tests.test_transerror.ErrorsTests) ... ok
Test analyzers in split classifier ... ok
Additional aspects of OnewayAnova ... ok
test_basic (mvpa.tests.test_datameasure.SensitivityAnalysersTests) ... ok
test_linear_svm_weights (mvpa.tests.test_datameasure.SensitivityAnalysersTests) ... ok
test_linear_svm_weights_per_class (mvpa.tests.test_datameasure.SensitivityAnalysersTests) ... ok
Test sensitivity of the mapped classifier ... ok
test_split_featurewise_dataset_measure (mvpa.tests.test_datameasure.SensitivityAnalysersTests) ... ok
test_union_feature_selection (mvpa.tests.test_datameasure.SensitivityAnalysersTests) ... ok
TODO ... SKIP: Please test application of transformations
Basic testing of atlases ... ==2427== Conditional jump or move depends on uninitialised value(s)
==2427== at 0xBFE4290: inflateReset2 (inflate.c:157)
==2427== by 0xBFE437F: inflateInit2_ (inflate.c:193)
==2427== by 0xBFDDC86: gz_open (gzio.c:186)
==2427== by 0x1A69C675: ??? (in /usr/lib/libxml2.so.2.7.6)
==2427== by 0x1A69C037: __xmlParserInputBufferCreateFilename (in /usr/lib/libxml2.so.2.7.6)
==2427== by 0x1A6714CB: xmlNewInputFromFile (in /usr/lib/libxml2.so.2.7.6)
==2427== by 0x1AE7A0E8: ??? (in /usr/lib/python2.5/site-packages/lxml/etree.so)
==2427== by 0x1A68B40E: xmlCtxtReadFile (in /usr/lib/libxml2.so.2.7.6)
==2427== by 0x1AE85CEF: ??? (in /usr/lib/python2.5/site-packages/lxml/etree.so)
==2427== by 0x1AE3C99F: ??? (in /usr/lib/python2.5/site-packages/lxml/etree.so)
==2427== by 0x1AE3CCC8: ??? (in /usr/lib/python2.5/site-packages/lxml/etree.so)
==2427== by 0x1AEAF4DF: ??? (in /usr/lib/python2.5/site-packages/lxml/etree.so)
==2427==
==2427== Warning: set address range perms: large range [0x421f9040, 0x7633da28) (defined)
==2427== Warning: set address range perms: large range [0x421f9030, 0x7633da38) (noaccess)
==2427== Warning: set address range perms: large range [0x421f9040, 0x56c867c0) (defined)
==2427== Warning: set address range perms: large range [0x421f9030, 0x56c867d0) (noaccess)
ok
mvpa.tests.test_atlases.test_fsl_hox_queries ... ==2427== Warning: set address range perms: large range [0x421f9040, 0x56c867c0) (defined)
==2427== Warning: set address range perms: large range [0x56c86800, 0x6b713f80) (defined)
==2427== Warning: set address range perms: large range [0x56c867f0, 0x6b713f90) (noaccess)
==2427== Warning: set address range perms: large range [0x421f9030, 0x56c867d0) (noaccess)
ok
Failure: SkipTest (External elasticnet is not present thus tests battery skipped) ... SKIP: External elasticnet is not present thus tests battery skipped
Failure: SkipTest (External lars is not present thus tests battery skipped) ... SKIP: External lars is not present thus tests battery skipped
Failure: SkipTest (External glmnet is not present thus tests battery skipped) ... SKIP: External glmnet is not present thus tests battery skipped
----------------------------------------------------------------------
Ran 296 tests in 11370.000s
OK (SKIP=7)
==2427==
==2427== HEAP SUMMARY:
==2427== in use at exit: 64,536,874 bytes in 41,987 blocks
==2427== total heap usage: 122,517,970 allocs, 122,475,983 frees, 44,345,427,088 bytes allocated
==2427==
==2427== LEAK SUMMARY:
==2427== definitely lost: 190,639 bytes in 1,389 blocks
==2427== indirectly lost: 415,804 bytes in 689 blocks
==2427== possibly lost: 24,322,953 bytes in 22,129 blocks
==2427== still reachable: 39,607,478 bytes in 17,780 blocks
==2427== suppressed: 0 bytes in 0 blocks
==2427== Rerun with --leak-check=full to see details of leaked memory
==2427==
==2427== For counts of detected and suppressed errors, rerun with: -v
==2427== Use --track-origins=yes to see where uninitialised values come from
==2427== ERROR SUMMARY: 21895 errors from 39 contexts (suppressed: 395540 from 1024)
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