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October 6, 2016 08:28
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Rna Transcription on exercism.io
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module DNA (count, nucleotideCounts) where | |
import Data.Map (Map, fromList, unionWith, mapKeys) | |
import Data.List | |
import Data.Maybe | |
import Control.Arrow | |
data NucleotideType = A | C | G | T deriving (Eq, Ord, Show, Read) | |
toNucleotideType :: Char -> Maybe NucleotideType | |
toNucleotideType c = | |
case c of | |
'A' -> Just A | |
'C' -> Just C | |
'G' -> Just G | |
'T' -> Just T | |
_ -> Nothing | |
fromNucleotideType :: NucleotideType -> Char | |
fromNucleotideType n = | |
case n of | |
A -> 'A' | |
C -> 'C' | |
G -> 'G' | |
T -> 'T' | |
nucleotides :: [NucleotideType] | |
nucleotides = [A, C, G, T] | |
initNucleotidesCounts :: Map NucleotideType Int | |
initNucleotidesCounts = fromList (zip nucleotides (repeat 0)) | |
frequencies :: Ord a => [a] -> Map a Int | |
frequencies = fromList . map (head &&& length) . group . sort | |
nucleotidesFrequencies :: [NucleotideType] -> Map Char Int | |
nucleotidesFrequencies dna = mapKeys fromNucleotideType (unionWith (+) initNucleotidesCounts (frequencies dna)) | |
-- Don't know how to simplify this line | |
count :: Char -> String -> Either String Int | |
count strand dna | |
| isNothing strand' = Left "incorrect strand" | |
| any isNothing dna' = Left "incorrect dna" | |
| otherwise = Right (length (filter (strand' ==) dna')) | |
where | |
strand' = toNucleotideType strand | |
dna' = map toNucleotideType dna | |
nucleotideCounts :: String -> Either String (Map Char Int) | |
nucleotideCounts dna | |
| any isNothing dna' = Left "incorrect dna" | |
| otherwise = Right (nucleotidesFrequencies $ catMaybes dna') | |
where dna' = map toNucleotideType dna |
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