easybuild-MRtrix-3.0_RC3-20190603.120534.log

gistfile1.txt

== 2019-06-03 11:59:22,954 easyblock.py:278 INFO This is EasyBuild 3.9.0 (framework: 3.9.0, easyblocks: 3.9.0) on host master.cluster.
== 2019-06-03 11:59:22,954 easyblock.py:284 INFO This is easyblock EB_MRtrix from module easybuild.easyblocks.mrtrix (/opt/ebsofts/Core/EasyBuild/3.9.0/lib/python2.6/site-packages/easybuild_easyblocks-3.9.0-py2.6.egg/easybuild/easyblocks/m/mrtrix.pyo)
== 2019-06-03 11:59:22,955 easyblock.py:834 INFO Build dir set to /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:22,955 config.py:506 DEBUG software install path as specified by 'installpath_software': /opt/ebsofts/
== 2019-06-03 11:59:22,955 easyconfig.py:2150 DEBUG Determining software installation subdir for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:22,956 toolchain.py:449 DEBUG Toolchain definition for {'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'}: {'LAPACK': ['OpenBLAS'], 'SCALAPACK': ['ScaLAPACK'], 'BLAS': ['OpenBLAS'], 'FFT': ['FFTW'], 'BLACS': ['BLACS'], 'MPI': ['OpenMPI'], 'COMPILER': ['GCC']}
== 2019-06-03 11:59:22,956 toolchain.py:59 DEBUG Obtained details for 'GCC' in toolchain '{'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'}' from cache
== 2019-06-03 11:59:22,956 toolchain.py:106 DEBUG Found compilers [{'external_module_metadata': {}, 'full_mod_name': 'Core/GCC/7.3.0-2.30', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'GCC', 'dummy': True, 'short_mod_name': 'GCC/7.3.0-2.30', 'external_module': False, 'versionsuffix': '', 'version': '7.3.0-2.30', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}] for toolchain foss ({'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'})
== 2019-06-03 11:59:22,957 toolchain.py:449 DEBUG Toolchain definition for {'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'}: {'LAPACK': ['OpenBLAS'], 'SCALAPACK': ['ScaLAPACK'], 'BLAS': ['OpenBLAS'], 'FFT': ['FFTW'], 'BLACS': ['BLACS'], 'MPI': ['OpenMPI'], 'COMPILER': ['GCC']}
== 2019-06-03 11:59:22,957 toolchain.py:59 DEBUG Obtained details for 'OpenMPI' in toolchain '{'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'}' from cache
== 2019-06-03 11:59:22,957 easyconfig.py:2156 DEBUG Obtained subdir MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/MRtrix/3.0_RC3-Python-2.7.15
== 2019-06-03 11:59:22,958 easyblock.py:894 INFO Software install dir set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/MRtrix/3.0_RC3-Python-2.7.15
== 2019-06-03 11:59:22,958 config.py:506 DEBUG modules install path as specified by 'installpath_modules': /opt/ebmodules/
== 2019-06-03 11:59:22,958 easyblock.py:899 INFO Module install dir set to /opt/ebmodules/all
== 2019-06-03 11:59:22,958 easyblock.py:263 INFO Init completed for application name MRtrix version 3.0_RC3
== 2019-06-03 11:59:22,958 easyblock.py:2980 INFO Obtained application instance of for MRtrix (easyblock: None)
== 2019-06-03 11:59:22,959 easyblock.py:2993 DEBUG Skip set to False
== 2019-06-03 11:59:22,959 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:22,959 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:22,960 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:22,960 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:22,960 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:22,960 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:22,960 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:22,961 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:22,961 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:22,961 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:22,961 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:22,962 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:22,962 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:22,962 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:22,962 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:22,963 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:22,963 one.py:146 INFO Skipping reformatting value for parameter 'toolchain'
== 2019-06-03 11:59:22,964 one.py:146 INFO Skipping reformatting value for parameter 'toolchainopts'
== 2019-06-03 11:59:22,965 easyconfig.py:996 DEBUG Dumped easyconfig: name = 'MRtrix'
version = '3.0_RC3'
versionsuffix = '-Python-%(pyver)s'

homepage = 'http://www.mrtrix.org/'
description = "MRtrix3 provides a set of tools to perform various types of diffusion MRI analyses, from various forms of tractography through to next-generation group-level analyses. It is designed with consistency, performance, and stability in mind, and is freely available under an open-source license. It is developed and maintained by a team of experts in the field, fostering an active community of users from diverse backgrounds."

toolchain = {'name': 'foss', 'version': '2018b'}
toolchainopts = {'cstd': 'c++11'}

# https://github.com/MRtrix3/mrtrix3/archive/3.0_RC3.tar.gz
source_urls = ['https://github.com/%(github_account)s/%(namelower)s3/archive']
sources = ['%(version)s.tar.gz']
checksums = ['1eebd96d476772b4f1aaad2d362af575e70fd2de0bede61a658758ffd9793b4d']

builddependencies = [
    ('Eigen', '3.3.7', '', True),
    ('XZ', '5.2.4', '', ('GCCcore', '7.3.0')),
    ('Autotools', '20180311', '', ('GCCcore', '7.3.0')),
]
dependencies = [
    ('LibTIFF', '4.0.9', '', ('GCCcore', '7.3.0')),
    ('zlib', '1.2.11', '', ('GCCcore', '7.3.0')),
    ('Python', '2.7.15'),
    ('Mesa', '18.1.1'),
    ('Qt', '4.8.7'),
    ('XZ', '5.2.4', '', ('GCCcore', '7.3.0')),
]

github_account = 'MRtrix3'

moduleclass = 'bio'

== 2019-06-03 11:59:22,965 filetools.py:1200 INFO Creating directory /tmp/eb-suH7ol/reprod_20190603115922_216595 (parents: True, set_gid: False, sticky: False)
== 2019-06-03 11:59:22,966 easyblock.py:3150 INFO Dumped easyconfig instance to /tmp/eb-suH7ol/reprod_20190603115922_216595/MRtrix-3.0_RC3-foss-2018b-Python-2.7.15.eb
== 2019-06-03 11:59:22,966 filetools.py:1200 INFO Creating directory /tmp/eb-suH7ol/reprod_20190603115922_216595/easyblocks (parents: True, set_gid: False, sticky: False)
== 2019-06-03 11:59:23,023 filetools.py:1670 INFO /opt/ebsofts/Core/EasyBuild/3.9.0/lib/python2.6/site-packages/easybuild_easyblocks-3.9.0-py2.6.egg/easybuild/easyblocks/m/mrtrix.py copied to /tmp/eb-suH7ol/reprod_20190603115922_216595/easyblocks/mrtrix.py
== 2019-06-03 11:59:23,024 easyblock.py:3165 INFO Dumped easyblock mrtrix.py required for reproduction to /tmp/eb-suH7ol/reprod_20190603115922_216595/easyblocks
== 2019-06-03 11:59:23,024 easyblock.py:1590 INFO Number of iterations to perform for central part of installation procedure: 1
== 2019-06-03 11:59:23,024 build_log.py:252 INFO building and installing MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/MRtrix/3.0_RC3-Python-2.7.15...
== 2019-06-03 11:59:23,024 easyblock.py:2752 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True
== 2019-06-03 11:59:23,025 build_log.py:252 INFO fetching files...
== 2019-06-03 11:59:23,025 easyblock.py:2760 INFO Starting fetch step
== 2019-06-03 11:59:23,025 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:23,025 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:23,026 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:23,026 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:23,026 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:23,026 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:23,026 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:23,026 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:23,027 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:23,027 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:23,027 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:23,027 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:23,027 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:23,028 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:23,028 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:23,028 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:23,028 easyblock.py:2766 INFO Running method fetch_step part of step fetch
== 2019-06-03 11:59:23,028 easyblock.py:1671 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
== 2019-06-03 11:59:23,029 filetools.py:394 INFO Command eb found at /opt/ebsofts/Core/EasyBuild/3.9.0/bin/eb
== 2019-06-03 11:59:23,029 tools.py:265 DEBUG Also considering installation prefix /opt/ebsofts/Core/EasyBuild/3.9.0...
== 2019-06-03 11:59:23,029 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /home/sagon/easybuild/easybuild/easyconfigs
== 2019-06-03 11:59:23,030 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /opt/easybuild/ebfiles_repo/easybuild/easyconfigs
== 2019-06-03 11:59:23,030 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /opt/ebsofts/Core/EasyBuild/3.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-3.9.0-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs
== 2019-06-03 11:59:23,030 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs
== 2019-06-03 11:59:23,030 tools.py:270 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs
== 2019-06-03 11:59:23,031 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /opt/ebsofts/Core/EasyBuild/3.9.0/lib/python2.6/site-packages/vsc_install-0.11.3-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,031 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /opt/ebsofts/Core/EasyBuild/3.9.0/lib/python2.6/site-packages/vsc_base-2.8.4-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,031 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /opt/ebsofts/Core/EasyBuild/3.9.0/lib/python2.6/site-packages/easybuild_framework-3.9.0-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,031 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /opt/ebsofts/Core/EasyBuild/3.9.0/lib/python2.6/site-packages/easybuild_easyblocks-3.9.0-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,032 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /opt/ebsofts/Core/EasyBuild/3.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-3.9.0-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,032 tools.py:274 DEBUG Added /opt/ebsofts/Core/EasyBuild/3.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-3.9.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2019-06-03 11:59:23,032 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/mayavi-4.3.0-py2.6-linux-x86_64.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,032 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/envisage-4.3.0-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,033 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/traitsui-4.3.0-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,033 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/traits-4.3.0-py2.6-linux-x86_64.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,033 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/apptools-4.2.0-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,033 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/pyface-4.3.0-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,033 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/configobj-4.7.2-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,033 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/closure_linter-2.3.13-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,034 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/python_gflags-2.0-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,034 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/backports.ssl_match_hostname-3.4.0.2-py2.6.egg/easybuild/easyconfigs
== 2019-06-03 11:59:23,034 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /opt/ebsofts/Core/EasyBuild/3.9.0/lib/python2.6/site-packages/easybuild/easyconfigs
== 2019-06-03 11:59:23,034 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python26.zip/easybuild/easyconfigs
== 2019-06-03 11:59:23,035 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/easybuild/easyconfigs
== 2019-06-03 11:59:23,035 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs
== 2019-06-03 11:59:23,035 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs
== 2019-06-03 11:59:23,035 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/lib-old/easybuild/easyconfigs
== 2019-06-03 11:59:23,036 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs
== 2019-06-03 11:59:23,036 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/site-packages/easybuild/easyconfigs
== 2019-06-03 11:59:23,036 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/site-packages/mpi4py.zip/easybuild/easyconfigs
== 2019-06-03 11:59:23,036 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/site-packages/gst-0.10/easybuild/easyconfigs
== 2019-06-03 11:59:23,037 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs
== 2019-06-03 11:59:23,037 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/site-packages/webkit-1.0/easybuild/easyconfigs
== 2019-06-03 11:59:23,037 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/site-packages/wx-2.8-gtk2-unicode/easybuild/easyconfigs
== 2019-06-03 11:59:23,037 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/easybuild/easyconfigs
== 2019-06-03 11:59:23,038 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs
== 2019-06-03 11:59:23,038 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs
== 2019-06-03 11:59:23,038 tools.py:270 DEBUG Checking for easybuild/easyconfigs at ../easybuild/easyconfigs
== 2019-06-03 11:59:23,038 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib/graphviz/python/easybuild/easyconfigs
== 2019-06-03 11:59:23,038 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/graphviz/python/easybuild/easyconfigs
== 2019-06-03 11:59:23,039 tools.py:270 DEBUG Checking for easybuild/easyconfigs at /opt/ebsofts/Core/EasyBuild/3.9.0/easybuild/easyconfigs
== 2019-06-03 11:59:23,081 easyblock.py:662 INFO Found file 3.0_RC3.tar.gz at /home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz
== 2019-06-03 11:59:23,082 easyblock.py:380 DEBUG File /home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz found for source 3.0_RC3.tar.gz
== 2019-06-03 11:59:23,082 easyblock.py:392 INFO Added sources: [{'path': '/home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz', 'cmd': None, 'finalpath': '/dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15', 'name': '3.0_RC3.tar.gz', 'checksum': '1eebd96d476772b4f1aaad2d362af575e70fd2de0bede61a658758ffd9793b4d'}]
== 2019-06-03 11:59:23,082 easyblock.py:1712 INFO no patches provided
== 2019-06-03 11:59:23,082 filetools.py:724 DEBUG Using blocksize 16777216 for calculating the checksum
== 2019-06-03 11:59:23,153 easyblock.py:1722 INFO md5 checksum for /home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz: 8f65dec957cbcd6f590b4105637f2119
== 2019-06-03 11:59:23,153 filetools.py:724 DEBUG Using blocksize 16777216 for calculating the checksum
== 2019-06-03 11:59:23,170 easyblock.py:1722 INFO sha256 checksum for /home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz: 1eebd96d476772b4f1aaad2d362af575e70fd2de0bede61a658758ffd9793b4d
== 2019-06-03 11:59:23,170 easyconfig.py:2137 DEBUG Determining full module name for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90> (force_visible: False)
== 2019-06-03 11:59:23,170 easyconfig.py:2114 DEBUG No alternative software name specified to determine module name with
== 2019-06-03 11:59:23,171 toolchain.py:449 DEBUG Toolchain definition for {'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'}: {'LAPACK': ['OpenBLAS'], 'SCALAPACK': ['ScaLAPACK'], 'BLAS': ['OpenBLAS'], 'FFT': ['FFTW'], 'BLACS': ['BLACS'], 'MPI': ['OpenMPI'], 'COMPILER': ['GCC']}
== 2019-06-03 11:59:23,171 toolchain.py:59 DEBUG Obtained details for 'GCC' in toolchain '{'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'}' from cache
== 2019-06-03 11:59:23,171 toolchain.py:106 DEBUG Found compilers [{'external_module_metadata': {}, 'full_mod_name': 'Core/GCC/7.3.0-2.30', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'GCC', 'dummy': True, 'short_mod_name': 'GCC/7.3.0-2.30', 'external_module': False, 'versionsuffix': '', 'version': '7.3.0-2.30', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}] for toolchain foss ({'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'})
== 2019-06-03 11:59:23,172 toolchain.py:449 DEBUG Toolchain definition for {'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'}: {'LAPACK': ['OpenBLAS'], 'SCALAPACK': ['ScaLAPACK'], 'BLAS': ['OpenBLAS'], 'FFT': ['FFTW'], 'BLACS': ['BLACS'], 'MPI': ['OpenMPI'], 'COMPILER': ['GCC']}
== 2019-06-03 11:59:23,172 toolchain.py:59 DEBUG Obtained details for 'OpenMPI' in toolchain '{'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'}' from cache
== 2019-06-03 11:59:23,173 utilities.py:103 DEBUG Module name MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/MRtrix/3.0_RC3-Python-2.7.15 validated
== 2019-06-03 11:59:23,173 easyconfig.py:2145 DEBUG Obtained valid full module name MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/MRtrix/3.0_RC3-Python-2.7.15
== 2019-06-03 11:59:23,173 easyblock.py:1757 INFO Checking dirs that need to be created: ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/MRtrix/3.0_RC3-Python-2.7.15', '/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/MRtrix']
== 2019-06-03 11:59:23,238 filetools.py:1228 DEBUG Not creating existing path /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/MRtrix/3.0_RC3-Python-2.7.15
== 2019-06-03 11:59:23,238 filetools.py:1228 DEBUG Not creating existing path /opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/MRtrix
== 2019-06-03 11:59:23,239 easyblock.py:2752 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True
== 2019-06-03 11:59:23,239 build_log.py:252 INFO creating build dir, resetting environment...
== 2019-06-03 11:59:23,239 easyblock.py:2760 INFO Starting ready step
== 2019-06-03 11:59:23,239 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:23,239 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:23,240 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:23,240 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:23,240 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:23,240 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:23,240 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:23,241 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:23,241 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:23,241 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:23,241 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:23,241 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:23,242 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:23,242 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:23,242 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:23,242 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:23,242 easyblock.py:2766 INFO Running method check_readiness_step part of step ready
== 2019-06-03 11:59:23,243 easyblock.py:1606 DEBUG Desired parallelism specified via 'parallel' build option: 12
== 2019-06-03 11:59:23,243 easyblock.py:1609 INFO Setting parallelism: 12
== 2019-06-03 11:59:23,243 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core:/opt/ebmodules/all/Core
== 2019-06-03 11:59:23,243 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2019-06-03 11:59:23,243 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:23,244 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python --terse list' from /home/sagon/easybuild/mrtrix
== 2019-06-03 11:59:23,307 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python --terse list': stdout: os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1\;/opt/ebmodules/all/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core:/opt/ebmodules/all/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "b2R1bGVzL2FsbC9Db3JlIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9vcHQvbW9kdWxlZmlsZXMvTGludXg6L29wdC9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZTovb3B0L2VibW9kdWxlcy9hbGwvQ29yZSIsfQ==";
os.environ["_ModuleTable_Sz_"] = "2";
; stderr: EasyBuild/3.9.0

== 2019-06-03 11:59:23,308 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python --terse list' ran fine
== 2019-06-03 11:59:23,308 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to []
== 2019-06-03 11:59:23,309 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to  (previous value: '')
== 2019-06-03 11:59:23,309 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:23,309 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:23,309 easyblock.py:1623 WARNING Loaded modules detected: ['EasyBuild/3.9.0']
== 2019-06-03 11:59:23,309 easyblock.py:1662 INFO Removing existing module file /opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/MRtrix/3.0_RC3-Python-2.7.15.lua
== 2019-06-03 11:59:23,369 easyblock.py:2766 INFO Running method make_builddir part of step ready
== 2019-06-03 11:59:23,392 easyblock.py:844 DEBUG Creating the build directory /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15 (cleanup: True)
== 2019-06-03 11:59:23,392 filetools.py:1200 INFO Creating directory /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15 (parents: True, set_gid: False, sticky: False)
== 2019-06-03 11:59:23,393 easyblock.py:2766 INFO Running method reset_env part of step ready
== 2019-06-03 11:59:23,393 easyblock.py:2766 INFO Running method handle_iterate_opts part of step ready
== 2019-06-03 11:59:23,394 easyblock.py:2752 DEBUG Not skipping source step (skippable: True, skip: None, skipsteps: [], module_only: False, force: True
== 2019-06-03 11:59:23,394 build_log.py:252 INFO unpacking...
== 2019-06-03 11:59:23,394 easyblock.py:2760 INFO Starting source step
== 2019-06-03 11:59:23,394 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:23,395 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:23,395 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:23,395 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:23,395 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:23,396 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:23,396 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:23,396 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:23,396 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:23,397 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:23,397 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:23,397 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:23,398 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:23,398 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:23,398 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:23,398 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:23,398 easyblock.py:2766 INFO Running method checksum_step part of step source
== 2019-06-03 11:59:23,399 filetools.py:724 DEBUG Using blocksize 16777216 for calculating the checksum
== 2019-06-03 11:59:23,418 filetools.py:772 DEBUG Computed sha256 checksum for /home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz: 1eebd96d476772b4f1aaad2d362af575e70fd2de0bede61a658758ffd9793b4d (correct checksum: 1eebd96d476772b4f1aaad2d362af575e70fd2de0bede61a658758ffd9793b4d)
== 2019-06-03 11:59:23,418 easyblock.py:1773 INFO Checksum verification for /home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz using 1eebd96d476772b4f1aaad2d362af575e70fd2de0bede61a658758ffd9793b4d passed.
== 2019-06-03 11:59:23,418 easyblock.py:2766 INFO Running method extract_step part of step source
== 2019-06-03 11:59:23,419 easyblock.py:1841 INFO Unpacking source 3.0_RC3.tar.gz
== 2019-06-03 11:59:23,419 filetools.py:1228 DEBUG Not creating existing path /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:23,419 filetools.py:360 DEBUG Unpacking /home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz in directory /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15.
== 2019-06-03 11:59:23,421 run.py:173 DEBUG run_cmd: running cmd tar xzf /home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz  --strip-components=1  (in /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15)
== 2019-06-03 11:59:23,421 run.py:192 INFO running cmd: tar xzf /home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz  --strip-components=1  
== 2019-06-03 11:59:23,577 run.py:508 DEBUG cmd "tar xzf /home/sagon/.local/easybuild/sources/m/MRtrix/3.0_RC3.tar.gz  --strip-components=1 " exited with exit code 0 and output:

== 2019-06-03 11:59:23,577 run.py:542 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w)
== 2019-06-03 11:59:23,578 filetools.py:826 DEBUG Last dir list ['update_dev_doc', 'travis.sh', 'testing', 'src', 'share', 'set_path', 'run_tests', 'run_pylint', 'package_mrtrix', 'mrtrix-mrview.desktop', 'mrtrix-mime.xml', 'matlab', 'lib', 'install_mime_types.sh', 'icons', 'generate_bash_completion.py', 'doxygen', 'docs', 'core', 'configure', 'cmd', 'check_syntax', 'build', 'bin', 'README.md', 'LICENCE.txt', 'Doxyfile']
== 2019-06-03 11:59:23,578 filetools.py:827 DEBUG Possible new dir /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15 found
== 2019-06-03 11:59:23,578 easyblock.py:2752 DEBUG Not skipping patch step (skippable: True, skip: None, skipsteps: [], module_only: False, force: True
== 2019-06-03 11:59:23,579 build_log.py:252 INFO patching...
== 2019-06-03 11:59:23,579 easyblock.py:2760 INFO Starting patch step
== 2019-06-03 11:59:23,579 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:23,579 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:23,580 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:23,580 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:23,580 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:23,580 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:23,580 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:23,580 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:23,580 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:23,581 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:23,581 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:23,581 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:23,581 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:23,581 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:23,581 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:23,582 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:23,582 easyblock.py:2766 INFO Running method patch_step part of step patch
== 2019-06-03 11:59:23,582 easyblock.py:2752 DEBUG Not skipping prepare step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True
== 2019-06-03 11:59:23,582 build_log.py:252 INFO preparing...
== 2019-06-03 11:59:23,582 easyblock.py:2760 INFO Starting prepare step
== 2019-06-03 11:59:23,582 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:23,583 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:23,583 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:23,583 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:23,583 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:23,583 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:23,584 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:23,584 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:23,584 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:23,584 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:23,584 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:23,584 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:23,585 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:23,585 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:23,585 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:23,585 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:23,585 easyblock.py:2766 INFO Running method prepare_step part of step prepare
== 2019-06-03 11:59:23,586 easyconfig.py:881 DEBUG Dependencies BEFORE filtering: [{'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/LibTIFF/4.0.9', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.9', 'external_module': False, 'versionsuffix': '', 'version': '4.0.9', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/zlib/1.2.11', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'zlib', 'dummy': False, 'short_mod_name': 'zlib/1.2.11', 'external_module': False, 'versionsuffix': '', 'version': '1.2.11', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15', 'toolchain': {'version': '2018b', 'name': 'foss'}, 'name': 'Python', 'dummy': False, 'short_mod_name': 'Python/2.7.15', 'external_module': False, 'versionsuffix': '', 'version': '2.7.15', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1', 'toolchain': {'version': '2018b', 'name': 'foss'}, 'name': 'Mesa', 'dummy': False, 'short_mod_name': 'Mesa/18.1.1', 'external_module': False, 'versionsuffix': '', 'version': '18.1.1', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7', 'toolchain': {'version': '2018b', 'name': 'foss'}, 'name': 'Qt', 'dummy': False, 'short_mod_name': 'Qt/4.8.7', 'external_module': False, 'versionsuffix': '', 'version': '4.8.7', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/XZ/5.2.4', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'XZ', 'dummy': False, 'short_mod_name': 'XZ/5.2.4', 'external_module': False, 'versionsuffix': '', 'version': '5.2.4', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Core/Eigen/3.3.7', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Eigen', 'dummy': True, 'short_mod_name': 'Eigen/3.3.7', 'external_module': False, 'versionsuffix': '', 'version': '3.3.7', 'toolchain_inherited': False, 'hidden': False, 'build_only': True}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/XZ/5.2.4', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'XZ', 'dummy': False, 'short_mod_name': 'XZ/5.2.4', 'external_module': False, 'versionsuffix': '', 'version': '5.2.4', 'toolchain_inherited': False, 'hidden': False, 'build_only': True}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/Autotools/20180311', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'Autotools', 'dummy': False, 'short_mod_name': 'Autotools/20180311', 'external_module': False, 'versionsuffix': '', 'version': '20180311', 'toolchain_inherited': False, 'hidden': False, 'build_only': True}]
== 2019-06-03 11:59:23,586 easyconfig.py:884 DEBUG Dependencies AFTER filtering: [{'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/LibTIFF/4.0.9', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.9', 'external_module': False, 'versionsuffix': '', 'version': '4.0.9', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/zlib/1.2.11', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'zlib', 'dummy': False, 'short_mod_name': 'zlib/1.2.11', 'external_module': False, 'versionsuffix': '', 'version': '1.2.11', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15', 'toolchain': {'version': '2018b', 'name': 'foss'}, 'name': 'Python', 'dummy': False, 'short_mod_name': 'Python/2.7.15', 'external_module': False, 'versionsuffix': '', 'version': '2.7.15', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1', 'toolchain': {'version': '2018b', 'name': 'foss'}, 'name': 'Mesa', 'dummy': False, 'short_mod_name': 'Mesa/18.1.1', 'external_module': False, 'versionsuffix': '', 'version': '18.1.1', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7', 'toolchain': {'version': '2018b', 'name': 'foss'}, 'name': 'Qt', 'dummy': False, 'short_mod_name': 'Qt/4.8.7', 'external_module': False, 'versionsuffix': '', 'version': '4.8.7', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/XZ/5.2.4', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'XZ', 'dummy': False, 'short_mod_name': 'XZ/5.2.4', 'external_module': False, 'versionsuffix': '', 'version': '5.2.4', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Core/Eigen/3.3.7', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Eigen', 'dummy': True, 'short_mod_name': 'Eigen/3.3.7', 'external_module': False, 'versionsuffix': '', 'version': '3.3.7', 'toolchain_inherited': False, 'hidden': False, 'build_only': True}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/XZ/5.2.4', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'XZ', 'dummy': False, 'short_mod_name': 'XZ/5.2.4', 'external_module': False, 'versionsuffix': '', 'version': '5.2.4', 'toolchain_inherited': False, 'hidden': False, 'build_only': True}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/Autotools/20180311', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'Autotools', 'dummy': False, 'short_mod_name': 'Autotools/20180311', 'external_module': False, 'versionsuffix': '', 'version': '20180311', 'toolchain_inherited': False, 'hidden': False, 'build_only': True}]
== 2019-06-03 11:59:23,587 toolchain.py:394 DEBUG _check_dependencies: adding toolchain dependencies [{'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/LibTIFF/4.0.9', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.9', 'external_module': False, 'versionsuffix': '', 'version': '4.0.9', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/zlib/1.2.11', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'zlib', 'dummy': False, 'short_mod_name': 'zlib/1.2.11', 'external_module': False, 'versionsuffix': '', 'version': '1.2.11', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15', 'toolchain': {'version': '2018b', 'name': 'foss'}, 'name': 'Python', 'dummy': False, 'short_mod_name': 'Python/2.7.15', 'external_module': False, 'versionsuffix': '', 'version': '2.7.15', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1', 'toolchain': {'version': '2018b', 'name': 'foss'}, 'name': 'Mesa', 'dummy': False, 'short_mod_name': 'Mesa/18.1.1', 'external_module': False, 'versionsuffix': '', 'version': '18.1.1', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7', 'toolchain': {'version': '2018b', 'name': 'foss'}, 'name': 'Qt', 'dummy': False, 'short_mod_name': 'Qt/4.8.7', 'external_module': False, 'versionsuffix': '', 'version': '4.8.7', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/XZ/5.2.4', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'XZ', 'dummy': False, 'short_mod_name': 'XZ/5.2.4', 'external_module': False, 'versionsuffix': '', 'version': '5.2.4', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Core/Eigen/3.3.7', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Eigen', 'dummy': True, 'short_mod_name': 'Eigen/3.3.7', 'external_module': False, 'versionsuffix': '', 'version': '3.3.7', 'toolchain_inherited': False, 'hidden': False, 'build_only': True}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/XZ/5.2.4', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'XZ', 'dummy': False, 'short_mod_name': 'XZ/5.2.4', 'external_module': False, 'versionsuffix': '', 'version': '5.2.4', 'toolchain_inherited': False, 'hidden': False, 'build_only': True}, {'external_module_metadata': {}, 'full_mod_name': 'Compiler/GCCcore/7.3.0/Autotools/20180311', 'toolchain': {'version': '7.3.0', 'name': 'GCCcore'}, 'name': 'Autotools', 'dummy': False, 'short_mod_name': 'Autotools/20180311', 'external_module': False, 'versionsuffix': '', 'version': '20180311', 'toolchain_inherited': False, 'hidden': False, 'build_only': True}]
== 2019-06-03 11:59:23,587 toolchain.py:404 DEBUG _check_dependencies: MODULEPATH: /opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core:/opt/ebmodules/all/Core
== 2019-06-03 11:59:23,587 modules.py:450 DEBUG Found cached result for 'module avail' with key '('MODULEPATH=/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core:/opt/ebmodules/all/Core', 'lmod', '--show-hidden')': ['2lpt/pngnonlocal', 'ADF/2017.113', 'Anaconda2/5.1.0', 'Anaconda3/4.2.0', 'Anaconda3/4.4.0', 'Beast/1.8.4', 'Bison/3.0.4', 'Bison/3.0.5', 'CMake/3.9.6', 'CUDA/8.0.44', 'CUDA/8.0.61', 'CUDA/9.1.85', 'Compiler/GCC-CUDA/7.3.0-2.30-9.2.88/OpenMPI/3.1.1', 'Compiler/GCC/4.7.2/OpenMPI/1.6.4', 'Compiler/GCC/4.7.2/hwloc/1.6.2', 'Compiler/GCC/4.9.2/Autoconf/2.69', 'Compiler/GCC/4.9.2/Automake/1.15', 'Compiler/GCC/4.9.2/M4/1.4.17', 'Compiler/GCC/4.9.2/OpenBLAS/0.2.13-LAPACK-3.5.0', 'Compiler/GCC/4.9.2/OpenMPI/1.8.4', 'Compiler/GCC/4.9.2/hwloc/1.10.0', 'Compiler/GCC/4.9.2/libtool/2.4.2', 'Compiler/GCC/4.9.2/numactl/2.0.10', 'Compiler/GCC/4.9.3-2.25/Autoconf/2.69', 'Compiler/GCC/4.9.3-2.25/Automake/1.15', 'Compiler/GCC/4.9.3-2.25/Autotools/20150215', 'Compiler/GCC/4.9.3-2.25/CMake/3.5.2', 'Compiler/GCC/4.9.3-2.25/GMP/6.1.0', 'Compiler/GCC/4.9.3-2.25/ISL/0.16', 'Compiler/GCC/4.9.3-2.25/M4/1.4.17', 'Compiler/GCC/4.9.3-2.25/OpenBLAS/0.2.15-LAPACK-3.6.0', 'Compiler/GCC/4.9.3-2.25/OpenBLAS/nehalem0.2.15-LAPACK-3.6.0', 'Compiler/GCC/4.9.3-2.25/OpenMPI/1.10.2', 'Compiler/GCC/4.9.3-2.25/Tcl/8.6.4', 'Compiler/GCC/4.9.3-2.25/bzip2/1.0.6', 'Compiler/GCC/4.9.3-2.25/hwloc/1.11.2', 'Compiler/GCC/4.9.3-2.25/libtool/2.4.6', 'Compiler/GCC/4.9.3-2.25/libxml2/2.9.3', 'Compiler/GCC/4.9.3-2.25/numactl/2.0.11', 'Compiler/GCC/4.9.3-2.25/zlib/1.2.8', 'Compiler/GCC/4.9.3-binutils-2.25/Autoconf/2.69', 'Compiler/GCC/4.9.3-binutils-2.25/Automake/1.15', 'Compiler/GCC/4.9.3-binutils-2.25/Autotools/20150215', 'Compiler/GCC/4.9.3-binutils-2.25/Bison/3.0.4', 'Compiler/GCC/4.9.3-binutils-2.25/M4/1.4.17', 'Compiler/GCC/4.9.3-binutils-2.25/OpenBLAS/0.2.14-LAPACK-3.5.0', 'Compiler/GCC/4.9.3-binutils-2.25/OpenMPI/1.8.8', 'Compiler/GCC/4.9.3-binutils-2.25/binutils/2.25', 'Compiler/GCC/4.9.3-binutils-2.25/flex/2.5.39', 'Compiler/GCC/4.9.3-binutils-2.25/hwloc/1.11.0', 'Compiler/GCC/4.9.3-binutils-2.25/libtool/2.4.6', 'Compiler/GCC/4.9.3-binutils-2.25/numactl/2.0.10', 'Compiler/GCC/4.9.3-binutils-2.25/zlib/1.2.8', 'Compiler/GCC/5.4.0-2.26/ATLAS/3.10.2-LAPACK-3.6.1', 'Compiler/GCC/5.4.0-2.26/Autoconf/2.69', 'Compiler/GCC/5.4.0-2.26/Automake/1.15', 'Compiler/GCC/5.4.0-2.26/Autotools/20150215', 'Compiler/GCC/5.4.0-2.26/M4/1.4.17', 'Compiler/GCC/5.4.0-2.26/OpenBLAS/0.2.18-LAPACK-3.6.0', 'Compiler/GCC/5.4.0-2.26/OpenBLAS/0.2.18-LAPACK-3.6.1', 'Compiler/GCC/5.4.0-2.26/OpenMPI/1.10.3', 'Compiler/GCC/5.4.0-2.26/Singularity/2.4.5', 'Compiler/GCC/5.4.0-2.26/hwloc/1.11.3', 'Compiler/GCC/5.4.0-2.26/libevent/2.0.22', 'Compiler/GCC/5.4.0-2.26/libtool/2.4.6', 'Compiler/GCC/5.4.0-2.26/ncurses/6.0', 'Compiler/GCC/5.4.0-2.26/numactl/2.0.11', 'Compiler/GCC/5.4.0-2.26/tmux/2.3', 'Compiler/GCC/6.3.0-2.27/OpenBLAS/0.2.19-LAPACK-3.7.0', 'Compiler/GCC/6.3.0-2.27/OpenMPI/2.0.2', 'Compiler/GCC/6.3.0-2.27/Singularity/2.4.2', 'Compiler/GCC/6.3.0-2.27/hwloc/1.11.5', 'Compiler/GCC/6.3.0-2.27/numactl/2.0.11', 'Compiler/GCC/6.4.0-2.28/CUDA/9.1.85', 'Compiler/GCC/6.4.0-2.28/OpenBLAS/0.2.20', 'Compiler/GCC/6.4.0-2.28/OpenMPI/2.1.1', 'Compiler/GCC/6.4.0-2.28/OpenMPI/2.1.2', 'Compiler/GCC/7.3.0-2.30/CUDA/9.2.88', 'Compiler/GCC/7.3.0-2.30/GSL/2.5', 'Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1', 'Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1', 'Compiler/GCC/8.2.0-2.31.1/OpenBLAS/0.3.5', 'Compiler/GCC/8.2.0-2.31.1/OpenMPI/3.1.3', 'Compiler/GCCcore/4.9.3/Bison/3.0.4', 'Compiler/GCCcore/4.9.3/M4/1.4.17', 'Compiler/GCCcore/4.9.3/binutils/2.25', 'Compiler/GCCcore/4.9.3/flex/2.5.39', 'Compiler/GCCcore/4.9.3/libreadline/6.3', 'Compiler/GCCcore/4.9.3/ncurses/6.0', 'Compiler/GCCcore/4.9.3/zlib/1.2.8', 'Compiler/GCCcore/5.4.0/Bison/3.0.4', 'Compiler/GCCcore/5.4.0/M4/1.4.17', 'Compiler/GCCcore/5.4.0/binutils/2.26', 'Compiler/GCCcore/5.4.0/flex/2.6.0', 'Compiler/GCCcore/5.4.0/zlib/1.2.8', 'Compiler/GCCcore/6.3.0/Autoconf/2.69', 'Compiler/GCCcore/6.3.0/Automake/1.15', 'Compiler/GCCcore/6.3.0/Autotools/20150215', 'Compiler/GCCcore/6.3.0/Bison/3.0.4', 'Compiler/GCCcore/6.3.0/Bowtie/1.1.2', 'Compiler/GCCcore/6.3.0/CMake/3.9.1', 'Compiler/GCCcore/6.3.0/GMP/6.1.2', 'Compiler/GCCcore/6.3.0/M4/1.4.18', 'Compiler/GCCcore/6.3.0/NASM/2.13.01', 'Compiler/GCCcore/6.3.0/SQLite/3.17.0', 'Compiler/GCCcore/6.3.0/Tcl/8.6.6', 'Compiler/GCCcore/6.3.0/X11/20170314', 'Compiler/GCCcore/6.3.0/XZ/5.2.3', 'Compiler/GCCcore/6.3.0/binutils/2.27', 'Compiler/GCCcore/6.3.0/bzip2/1.0.6', 'Compiler/GCCcore/6.3.0/cURL/7.53.1', 'Compiler/GCCcore/6.3.0/expat/2.2.0', 'Compiler/GCCcore/6.3.0/flex/2.6.3', 'Compiler/GCCcore/6.3.0/fontconfig/2.12.1-libpng-1.6.29', 'Compiler/GCCcore/6.3.0/freetype/2.7.1-libpng-1.6.29', 'Compiler/GCCcore/6.3.0/gettext/0.19.8.1', 'Compiler/GCCcore/6.3.0/help2man/1.47.4', 'Compiler/GCCcore/6.3.0/libffi/3.2.1', 'Compiler/GCCcore/6.3.0/libjpeg-turbo/1.5.2', 'Compiler/GCCcore/6.3.0/libpng/1.6.29', 'Compiler/GCCcore/6.3.0/libreadline/7.0', 'Compiler/GCCcore/6.3.0/libtool/2.4.6', 'Compiler/GCCcore/6.3.0/libxml2/2.9.4', 'Compiler/GCCcore/6.3.0/ncurses/6.0', 'Compiler/GCCcore/6.3.0/numactl/2.0.11', 'Compiler/GCCcore/6.3.0/pixman/0.34.0', 'Compiler/GCCcore/6.3.0/pkg-config/0.29.1', 'Compiler/GCCcore/6.3.0/tbb/2017_U6', 'Compiler/GCCcore/6.3.0/zlib/1.2.11', 'Compiler/GCCcore/6.4.0/APR-util/1.6.1', 'Compiler/GCCcore/6.4.0/APR/1.6.3', 'Compiler/GCCcore/6.4.0/Autoconf/2.69', 'Compiler/GCCcore/6.4.0/Automake/1.15.1', 'Compiler/GCCcore/6.4.0/Autotools/20170619', 'Compiler/GCCcore/6.4.0/Bazel/0.10.0', 'Compiler/GCCcore/6.4.0/Bazel/0.11.0', 'Compiler/GCCcore/6.4.0/Bazel/0.11.1', 'Compiler/GCCcore/6.4.0/Bison/3.0.4', 'Compiler/GCCcore/6.4.0/CMake/3.10.2', 'Compiler/GCCcore/6.4.0/CMake/3.9.1', 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'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/InterProScan/5.27-66.0', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/LLVM/4.0.0', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/LibTIFF/4.0.7', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/LibTIFF/4.0.8', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/Libint/1.1.6', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/M4/1.4.17', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/Mako/1.0.6-Python-2.7.13', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/Mesa/17.0.2', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/Mono/5.10.0.160', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/NASM/2.12.02', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/NLopt/2.4.2', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/OpenEXR/2.2.0', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/OpenImageIO/1.7.17', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/PCRE/8.40', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/PLUMED/2.3.0', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/PROJ/4.9.3', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/Perl/5.24.1', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/Python/2.7.13', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/Python/3.6.1', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/Szip/2.1', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/Theano/0.9.0-Python-3.6.1', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/Tk/8.6.6', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/cairo/1.14.8', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/flex/2.6.0', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/h5py/2.7.0-Python-2.7.13', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/imkl/2017.1.132', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libGLU/9.0.0', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libdrm/2.4.76', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libffi/3.2.1', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libgd/2.2.4', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libgpuarray/0.6.0', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libgpuarray/0.6.5', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libidn/1.32', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libjpeg-turbo/1.5.1', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libmatheval/1.1.11', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libreadline/6.3', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libtasn1/4.7', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libtool/2.4.6', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libunistring/0.9.6', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libxc/2.2.3', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/libxsmm/1.6.4', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/lpsolve/5.5.2.5', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/ncurses/6.0', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/nettle/3.3', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/numpy/1.13.1-Python-3.6.1', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/p11-kit/0.23.2', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/pkg-config/0.29.1', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/pkg-config/0.29.2', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/pkgconfig/1.2.2-Python-2.7.13', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/scipy/1.0.0-Python-3.6.1', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/util-linux/2.29.2', 'MPI/intel/2017.1.132-GCC-6.3.0-2.27/impi/2017.1.132/zlib/1.2.8', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/ABINIT/8.8.4', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/CD-HIT/4.6.8', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/CP2K/6.1', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/FFTW/3.3.7', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/HDF5/1.10.1', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/HISAT2/2.1.0', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/Libint/1.1.6', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/MMseqs2/5-9375b', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/NGS/2.9.1-Java-1.8.0_162', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/PLUMED/2.4.0', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/PyYAML/3.12-Python-3.6.4', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/Python/3.6.4', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/TransDecoder/5.3.0-Perl-5.26.1', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/imkl/2018.1.163', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/libxc/3.0.1', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/libxc/4.2.3', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/libxsmm/1.8.3', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/ncbi-vdb/2.9.1-1', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/netCDF-Fortran/4.4.4', 'MPI/intel/2018.1.163-GCC-6.4.0-2.28/impi/2018.1.163/netCDF/4.6.0', 'MPI/intel/2018.3.222-GCC-7.3.0-2.30/impi/2018.3.222/imkl/2018.3.222', 'Mathematica/11.1.1', 'PGI/1110', 'PGI/1310', 'PGI/17.4-GCC-6.3.0-2.27', 'SeqAn-library/2.4.0', 'Stata/14', 'WEKA/3.8.0-Java-1.8.0_121', 'adf/201403', 'adf/2016.106', 'ant/1.10.1-Java-1.8.0_121', 'ant/1.10.5-Java-1.8', 'ant/1.9.7-Java-1.8.0_92', 'binutils/2.25', 'binutils/2.26', 'binutils/2.27', 'binutils/2.28', 'binutils/2.30', 'binutils/2.31.1', 'cdhit-cluster-consensus/2013-03-27', 'cfm/r16', 'cfm/r30', 'cpmd/3171', 'cuDNN/5.1-CUDA-8.0.44', 'cuDNN/6.0-CUDA-8.0.61', 'cuDNN/7.0.5-CUDA-9.1.85', 'dot', 'exaML/108', 'exabayes/141', 'fastx_toolkit/0.0.14', 'fftw2/215', 'flex/2.5.39', 'flex/2.6.0', 'flex/2.6.3', 'flex/2.6.4', 'fluent/172', 'foss/2015a', 'foss/2015b', 'foss/2016.06', 'foss/2016a', 'foss/2016b', 'foss/2017a', 'foss/2017b', 'foss/2018a', 'foss/2018b', 'fosscuda/2018b', 'fsl/507', 'gaussian/g09_1110_c01', 'gaussian/g09_1110_d01', 'gaussian/g16', 'gcccuda/2018b', 'gettext/0.19.8', 'gettext/0.19.8.1', 'git-lfs/2.0.2', 'gompi/1.4.10', 'gompi/2015a', 'gompi/2015b', 'gompi/2016.06', 'gompi/2016a', 'gompi/2016b', 'gompi/2017a', 'gompi/2017b', 'gompi/2018a', 'gompi/2018b', 'gompic/2018b', 'help2man/1.47.4', 'icc/2015.3.187-GNU-4.9.3-2.25', 'icc/2016.1.150-GCC-4.9.3-2.25', 'icc/2016.3.210-GCC-5.4.0-2.26', 'icc/2017.1.132-GCC-6.3.0-2.27', 'icc/2018.1.163-GCC-6.4.0-2.28', 'icc/2018.3.222-GCC-7.3.0-2.30', 'iccifort/2015.3.187-GNU-4.9.3-2.25', 'iccifort/2016.1.150-GCC-4.9.3-2.25', 'iccifort/2016.3.210-GCC-5.4.0-2.26', 'iccifort/2017.1.132-GCC-6.3.0-2.27', 'iccifort/2018.1.163-GCC-6.4.0-2.28', 'iccifort/2018.3.222-GCC-7.3.0-2.30', 'ifort/2015.3.187-GNU-4.9.3-2.25', 'ifort/2016.1.150-GCC-4.9.3-2.25', 'ifort/2016.3.210-GCC-5.4.0-2.26', 'ifort/2017.1.132-GCC-6.3.0-2.27', 'ifort/2018.1.163-GCC-6.4.0-2.28', 'ifort/2018.3.222-GCC-7.3.0-2.30', 'iimpi/2016b', 'iimpi/2017a', 'iimpi/2018a', 'iimpi/2018b', 'iimpi/8.1.5-GCC-4.9.3-2.25', 'imod/4.7.15', 'intel/2016a', 'intel/2016b', 'intel/2017a', 'intel/2018a', 'intel/2018b', 'iompi/2016.09-GCC-5.4.0-2.26', 'julia/0.5.1', 'julia/1.0.1', 'libpng/1.2.58', 'libreadline/6.3', 'lmod', 'matlab/2016a', 'matlab/2016b', 'matlab/2017b', 'matlab/2018b', 'metapiga/31', 'metapiga/31bigmem', 'module-git', 'module-info', 'modules', 'ncurses/6.0', 'null', 'nwchem/65', 'oma/105', 'openmpi/gcc/1100', 'openmpi/gcc/1102', 'openmpi/gcc/165', 'openmpi/gcc/184', 'openmpi/intel/1102', 'openmpi/intel/184', 'phyml/31', 'rdkit/2014_09_2', 'rdkit/2016_09_3', 'relion/14', 'settarg', 'spider/22.10', 'spring/0-84-1470', 'sratoolkit/2.4.5-2', 'sratoolkit/2.8.2', 'stata/13mp16', 'stata/14mp24', 'tracer/15', 'trinity/20131110', 'trinity/20140717', 'use.own', 'xcb-proto/1.11', 'xsd/330', 'zlib/1.2.11', 'zlib/1.2.8']
== 2019-06-03 11:59:23,590 modules.py:562 DEBUG Result for existence check of Compiler/GCCcore/7.3.0/LibTIFF/4.0.9 module: True
== 2019-06-03 11:59:23,590 modules.py:562 DEBUG Result for existence check of Compiler/GCCcore/7.3.0/zlib/1.2.11 module: True
== 2019-06-03 11:59:23,591 modules.py:562 DEBUG Result for existence check of MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15 module: True
== 2019-06-03 11:59:23,591 modules.py:562 DEBUG Result for existence check of MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1 module: True
== 2019-06-03 11:59:23,591 modules.py:562 DEBUG Result for existence check of MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7 module: True
== 2019-06-03 11:59:23,591 modules.py:562 DEBUG Result for existence check of Compiler/GCCcore/7.3.0/XZ/5.2.4 module: True
== 2019-06-03 11:59:23,591 modules.py:562 DEBUG Result for existence check of Core/Eigen/3.3.7 module: True
== 2019-06-03 11:59:23,591 modules.py:562 DEBUG Result for existence check of Compiler/GCCcore/7.3.0/XZ/5.2.4 module: True
== 2019-06-03 11:59:23,592 modules.py:562 DEBUG Result for existence check of Compiler/GCCcore/7.3.0/Autotools/20180311 module: True
== 2019-06-03 11:59:23,592 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core:/opt/ebmodules/all/Core
== 2019-06-03 11:59:23,592 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2019-06-03 11:59:23,592 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:23,592 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python show Core/foss/2018b' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:24,243 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python show Core/foss/2018b': stdout: os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1\;/opt/ebmodules/all/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core:/opt/ebmodules/all/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "b2R1bGVzL2FsbC9Db3JlIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9vcHQvbW9kdWxlZmlsZXMvTGludXg6L29wdC9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZTovb3B0L2VibW9kdWxlcy9hbGwvQ29yZSIsfQ==";
os.environ["_ModuleTable_Sz_"] = "2";
; stderr: --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
   /opt/ebmodules/all/Core/foss/2018b.lua:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
help([[
Description
===========
GNU Compiler Collection (GCC) based compiler toolchain, including
 OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.


More information
================
 - Homepage: (none)
]])
whatis("Description: GNU Compiler Collection (GCC) based compiler toolchain, including
 OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.")
whatis("Homepage: (none)")
conflict("foss")
load("GCC/7.3.0-2.30")
load("OpenMPI/3.1.1")
load("OpenBLAS/0.3.1")
load("FFTW/3.3.8")
load("ScaLAPACK/2.0.2-OpenBLAS-0.3.1")
setenv("EBROOTFOSS","/opt/ebsofts/Core/foss/2018b")
setenv("EBVERSIONFOSS","2018b")
setenv("EBDEVELFOSS","/opt/ebsofts/Core/foss/2018b/easybuild/Core-foss-2018b-easybuild-devel")


== 2019-06-03 11:59:24,244 modules.py:628 DEBUG Cached result for 'module show Core/foss/2018b' with key '('MODULEPATH=/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core:/opt/ebmodules/all/Core', 'lmod', 'Core/foss/2018b')': os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1\;/opt/ebmodules/all/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core:/opt/ebmodules/all/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "b2R1bGVzL2FsbC9Db3JlIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9vcHQvbW9kdWxlZmlsZXMvTGludXg6L29wdC9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZTovb3B0L2VibW9kdWxlcy9hbGwvQ29yZSIsfQ==";
os.environ["_ModuleTable_Sz_"] = "2";
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
   /opt/ebmodules/all/Core/foss/2018b.lua:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
help([[
Description
===========
GNU Compiler Collection (GCC) based compiler toolchain, including
 OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.


More information
================
 - Homepage: (none)
]])
whatis("Description: GNU Compiler Collection (GCC) based compiler toolchain, including
 OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.")
whatis("Homepage: (none)")
conflict("foss")
load("GCC/7.3.0-2.30")
load("OpenMPI/3.1.1")
load("OpenBLAS/0.3.1")
load("FFTW/3.3.8")
load("ScaLAPACK/2.0.2-OpenBLAS-0.3.1")
setenv("EBROOTFOSS","/opt/ebsofts/Core/foss/2018b")
setenv("EBVERSIONFOSS","2018b")
setenv("EBDEVELFOSS","/opt/ebsofts/Core/foss/2018b/easybuild/Core-foss-2018b-easybuild-devel")


== 2019-06-03 11:59:24,245 modules.py:562 DEBUG Result for existence check of Core/foss/2018b module: True
== 2019-06-03 11:59:24,245 toolchain.py:611 DEBUG Loading toolchain module and dependencies...
== 2019-06-03 11:59:24,245 config.py:506 DEBUG modules install path as specified by 'installpath_modules': /opt/ebmodules/
== 2019-06-03 11:59:24,245 filetools.py:1228 DEBUG Not creating existing path /opt/ebmodules/all/Core
== 2019-06-03 11:59:24,246 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core:/opt/ebmodules/all/Core
== 2019-06-03 11:59:24,246 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2019-06-03 11:59:24,246 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:24,246 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python use /opt/ebmodules/all/Core' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:24,921 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python use /opt/ebmodules/all/Core': stdout: os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all/Core:2\;/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "b2R1bGVmaWxlcy9Db3JlIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9vcHQvbW9kdWxlZmlsZXMvTGludXg6L29wdC9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZTovb3B0L2VibW9kdWxlcy9hbGwvQ29yZSIsfQ==";
os.environ["_ModuleTable_Sz_"] = "2";
; stderr: 
== 2019-06-03 11:59:24,921 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python use /opt/ebmodules/all/Core' ran fine
== 2019-06-03 11:59:24,921 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to []
== 2019-06-03 11:59:24,922 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to  (previous value: '')
== 2019-06-03 11:59:24,922 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:24,922 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:24,922 modules.py:332 DEBUG $MODULEPATH after set_mod_paths: /opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:24,922 toolchain.py:526 DEBUG Loading module for toolchain: foss/2018b
== 2019-06-03 11:59:24,923 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:24,923 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2019-06-03 11:59:24,923 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:24,923 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python --terse list' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:24,986 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python --terse list': stdout: os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all/Core:1\;/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "b2R1bGVmaWxlcy9Db3JlIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9vcHQvbW9kdWxlZmlsZXMvTGludXg6L29wdC9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZTovb3B0L2VibW9kdWxlcy9hbGwvQ29yZSIsfQ==";
os.environ["_ModuleTable_Sz_"] = "2";
; stderr: EasyBuild/3.9.0

== 2019-06-03 11:59:24,986 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python --terse list' ran fine
== 2019-06-03 11:59:24,987 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to []
== 2019-06-03 11:59:24,987 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to  (previous value: '')
== 2019-06-03 11:59:24,987 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:24,987 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:24,988 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:24,988 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2019-06-03 11:59:24,988 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:24,988 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python load foss/2018b' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:25,920 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python load foss/2018b': stdout: os.environ["__LMOD_REF_COUNT_CPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:1\;/opt/ebsofts/Core/GCCcore/7.3.0/include:1";
os.environ["CPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:/opt/ebsofts/Core/GCCcore/7.3.0/include";
os.environ["EBDEVELBINUTILS"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/easybuild/Compiler-GCCcore-7.3.0-binutils-2.30-easybuild-devel";
os.environ["EBDEVELFFTW"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/easybuild/MPI-GCC-7.3.0-2.30-OpenMPI-3.1.1-FFTW-3.3.8-easybuild-devel";
os.environ["EBDEVELFOSS"] = "/opt/ebsofts/Core/foss/2018b/easybuild/Core-foss-2018b-easybuild-devel";
os.environ["EBDEVELGCC"] = "/opt/ebsofts/Core/GCC/7.3.0-2.30/easybuild/Core-GCC-7.3.0-2.30-easybuild-devel";
os.environ["EBDEVELGCCCORE"] = "/opt/ebsofts/Core/GCCcore/7.3.0/easybuild/Core-GCCcore-7.3.0-easybuild-devel";
os.environ["EBDEVELHWLOC"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/easybuild/Compiler-GCCcore-7.3.0-hwloc-1.11.10-easybuild-devel";
os.environ["EBDEVELNUMACTL"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/easybuild/Compiler-GCCcore-7.3.0-numactl-2.0.11-easybuild-devel";
os.environ["EBDEVELOPENBLAS"] = "/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/easybuild/Compiler-GCC-7.3.0-2.30-OpenBLAS-0.3.1-easybuild-devel";
os.environ["EBDEVELOPENMPI"] = "/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/easybuild/Compiler-GCC-7.3.0-2.30-OpenMPI-3.1.1-easybuild-devel";
os.environ["EBDEVELSCALAPACK"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/easybuild/MPI-GCC-7.3.0-2.30-OpenMPI-3.1.1-ScaLAPACK-2.0.2-OpenBLAS-0.3.1-easybuild-devel";
os.environ["EBDEVELZLIB"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/easybuild/Compiler-GCCcore-7.3.0-zlib-1.2.11-easybuild-devel";
os.environ["EBROOTBINUTILS"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30";
os.environ["EBROOTFFTW"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8";
os.environ["EBROOTFOSS"] = "/opt/ebsofts/Core/foss/2018b";
os.environ["EBROOTGCC"] = "/opt/ebsofts/Core/GCCcore/7.3.0";
os.environ["EBROOTGCCCORE"] = "/opt/ebsofts/Core/GCCcore/7.3.0";
os.environ["EBROOTHWLOC"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10";
os.environ["EBROOTNUMACTL"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11";
os.environ["EBROOTOPENBLAS"] = "/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1";
os.environ["EBROOTOPENMPI"] = "/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1";
os.environ["EBROOTSCALAPACK"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1";
os.environ["EBROOTZLIB"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11";
os.environ["EBVERSIONBINUTILS"] = "2.30";
os.environ["EBVERSIONFFTW"] = "3.3.8";
os.environ["EBVERSIONFOSS"] = "2018b";
os.environ["EBVERSIONGCC"] = "7.3.0";
os.environ["EBVERSIONGCCCORE"] = "7.3.0";
os.environ["EBVERSIONHWLOC"] = "1.11.10";
os.environ["EBVERSIONNUMACTL"] = "2.0.11";
os.environ["EBVERSIONOPENBLAS"] = "0.3.1";
os.environ["EBVERSIONOPENMPI"] = "3.1.1";
os.environ["EBVERSIONSCALAPACK"] = "2.0.2";
os.environ["EBVERSIONZLIB"] = "1.2.11";
os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib64:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib:1";
os.environ["LD_LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib";
os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib64:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib:1";
os.environ["LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib";
os.environ["__LMOD_REF_COUNT_LOADEDMODULES"] = "EasyBuild/3.9.0:1\;GCCcore/7.3.0:1\;binutils/2.30:1\;GCC/7.3.0-2.30:1\;zlib/1.2.11:1\;numactl/2.0.11:1\;hwloc/1.11.10:1\;OpenMPI/3.1.1:1\;OpenBLAS/0.3.1:1\;FFTW/3.3.8:1\;ScaLAPACK/2.0.2-OpenBLAS-0.3.1:1\;foss/2018b:1";
os.environ["LOADEDMODULES"] = "EasyBuild/3.9.0:GCCcore/7.3.0:binutils/2.30:GCC/7.3.0-2.30:zlib/1.2.11:numactl/2.0.11:hwloc/1.11.10:OpenMPI/3.1.1:OpenBLAS/0.3.1:FFTW/3.3.8:ScaLAPACK/2.0.2-OpenBLAS-0.3.1:foss/2018b";
os.environ["__LMOD_REF_COUNT_MANPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/share/man:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/share/man:1\;/opt/ebsofts/Core/GCCcore/7.3.0/share/man:1\;/opt/lmod/lmod/share/man:1\;/opt/c3-4/man:1";
os.environ["MANPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/share/man:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/share/man:/opt/ebsofts/Core/GCCcore/7.3.0/share/man:/opt/lmod/lmod/share/man::/opt/c3-4/man";
os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0:1\;/opt/ebmodules/all/Core:1\;/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core";
os.environ["__LMOD_REF_COUNT_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/bin:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/bin:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/sbin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/bin:1\;/opt/ebsofts/Core/GCCcore/7.3.0/bin:1\;/opt/ebsofts/Core/EasyBuild/3.9.0/bin:1\;/usr/lib64/qt-3.3/bin:1\;/opt/cluster/admin:1\;/usr/local/bin:1\;/bin:1\;/usr/bin:1\;/usr/local/sbin:1\;/usr/sbin:1\;/sbin:1\;/opt/c3-4:1\;/opt/ibutils/bin:1\;/home/sagon/bin:1\;/opt/nodejs/bin:1";
os.environ["PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/bin:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/bin:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/sbin:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/bin:/opt/ebsofts/Core/GCCcore/7.3.0/bin:/opt/ebsofts/Core/EasyBuild/3.9.0/bin:/usr/lib64/qt-3.3/bin:/opt/cluster/admin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/c3-4:/opt/ibutils/bin:/home/sagon/bin:/opt/nodejs/bin";
os.environ["__LMOD_REF_COUNT_PKG_CONFIG_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib/pkgconfig:1";
os.environ["PKG_CONFIG_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib/pkgconfig:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib/pkgconfig:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib/pkgconfig:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib/pkgconfig:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib/pkgconfig";
os.environ["__LMOD_REF_COUNT__LMFILES_"] = "/opt/ebmodules/all/Core/EasyBuild/3.9.0.lua:1\;/opt/ebmodules/all/Core/GCCcore/7.3.0.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/binutils/2.30.lua:1\;/opt/ebmodules/all/Core/GCC/7.3.0-2.30.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/zlib/1.2.11.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/numactl/2.0.11.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/hwloc/1.11.10.lua:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1.lua:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1.lua:1\;/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8.lua:1\;/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1.lua:1\;/opt/ebmodules/all/Core/foss/2018b.lua:1";
os.environ["_LMFILES_"] = "/opt/ebmodules/all/Core/EasyBuild/3.9.0.lua:/opt/ebmodules/all/Core/GCCcore/7.3.0.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/binutils/2.30.lua:/opt/ebmodules/all/Core/GCC/7.3.0-2.30.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/zlib/1.2.11.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/numactl/2.0.11.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/hwloc/1.11.10.lua:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1.lua:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1.lua:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8.lua:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1.lua:/opt/ebmodules/all/Core/foss/2018b.lua";
os.environ["_ModuleTable001_"] = "X01vZHVsZVRhYmxlXz17WyJNVHZlcnNpb24iXT0zLFsiY19yZWJ1aWxkVGltZSJdPTg2NDAwLFsiY19zaG9ydFRpbWUiXT1mYWxzZSxkZXB0aFQ9e30sZmFtaWx5PXt9LG1UPXtFYXN5QnVpbGQ9e1siZm4iXT0iL29wdC9lYm1vZHVsZXMvYWxsL0NvcmUvRWFzeUJ1aWxkLzMuOS4wLmx1YSIsWyJmdWxsTmFtZSJdPSJFYXN5QnVpbGQvMy45LjAiLFsibG9hZE9yZGVyIl09MSxwcm9wVD17fSxbInN0YWNrRGVwdGgiXT0wLFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJFYXN5QnVpbGQiLH0sRkZUVz17WyJmbiJdPSIvb3B0L2VibW9kdWxlcy9hbGwvTVBJL0dDQy83LjMuMC0yLjMwL09wZW5NUEkvMy4xLjEvRkZUVy8zLjMuOC5sdWEiLFsiZnVsbE5hbWUiXT0iRkZU";
os.environ["_ModuleTable002_"] = "Vy8zLjMuOCIsWyJsb2FkT3JkZXIiXT0xMCxwcm9wVD17fSxbInN0YWNrRGVwdGgiXT0xLFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJGRlRXLzMuMy44Iix9LEdDQz17WyJmbiJdPSIvb3B0L2VibW9kdWxlcy9hbGwvQ29yZS9HQ0MvNy4zLjAtMi4zMC5sdWEiLFsiZnVsbE5hbWUiXT0iR0NDLzcuMy4wLTIuMzAiLFsibG9hZE9yZGVyIl09NCxwcm9wVD17fSxbInN0YWNrRGVwdGgiXT0xLFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJHQ0MvNy4zLjAtMi4zMCIsfSxHQ0Njb3JlPXtbImZuIl09Ii9vcHQvZWJtb2R1bGVzL2FsbC9Db3JlL0dDQ2NvcmUvNy4zLjAubHVhIixbImZ1bGxOYW1lIl09IkdDQ2NvcmUvNy4zLjAiLFsibG9hZE9yZGVyIl09";
os.environ["_ModuleTable003_"] = "Mixwcm9wVD17fSxbInN0YWNrRGVwdGgiXT0yLFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJHQ0Njb3JlLzcuMy4wIix9LE9wZW5CTEFTPXtbImZuIl09Ii9vcHQvZWJtb2R1bGVzL2FsbC9Db21waWxlci9HQ0MvNy4zLjAtMi4zMC9PcGVuQkxBUy8wLjMuMS5sdWEiLFsiZnVsbE5hbWUiXT0iT3BlbkJMQVMvMC4zLjEiLFsibG9hZE9yZGVyIl09OSxwcm9wVD17fSxbInN0YWNrRGVwdGgiXT0xLFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJPcGVuQkxBUy8wLjMuMSIsfSxPcGVuTVBJPXtbImZuIl09Ii9vcHQvZWJtb2R1bGVzL2FsbC9Db21waWxlci9HQ0MvNy4zLjAtMi4zMC9PcGVuTVBJLzMuMS4xLmx1YSIsWyJmdWxsTmFtZSJdPSJPcGVuTVBJ";
os.environ["_ModuleTable004_"] = "LzMuMS4xIixbImxvYWRPcmRlciJdPTgscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MSxbInN0YXR1cyJdPSJhY3RpdmUiLFsidXNlck5hbWUiXT0iT3Blbk1QSS8zLjEuMSIsfSxTY2FMQVBBQ0s9e1siZm4iXT0iL29wdC9lYm1vZHVsZXMvYWxsL01QSS9HQ0MvNy4zLjAtMi4zMC9PcGVuTVBJLzMuMS4xL1NjYUxBUEFDSy8yLjAuMi1PcGVuQkxBUy0wLjMuMS5sdWEiLFsiZnVsbE5hbWUiXT0iU2NhTEFQQUNLLzIuMC4yLU9wZW5CTEFTLTAuMy4xIixbImxvYWRPcmRlciJdPTExLHByb3BUPXt9LFsic3RhY2tEZXB0aCJdPTEsWyJzdGF0dXMiXT0iYWN0aXZlIixbInVzZXJOYW1lIl09IlNjYUxBUEFDSy8yLjAuMi1PcGVuQkxBUy0wLjMuMSIsfSxiaW51dGlscz17WyJmbiJdPSIv";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "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";
os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "b2R1bGVmaWxlcy9MaW51eCIsIi9vcHQvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL29wdC9tb2R1bGVmaWxlcy9MaW51eDovb3B0L2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9vcHQvZWJtb2R1bGVzL2FsbC9Db3JlIix9";
os.environ["_ModuleTable_Sz_"] = "8";
; stderr: 
== 2019-06-03 11:59:25,920 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python load foss/2018b' ran fine
== 2019-06-03 11:59:25,922 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib'] to ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:25,922 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib')
== 2019-06-03 11:59:25,922 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:25,923 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:25,923 toolchain.py:556 DEBUG Loading modules for dependencies: ['LibTIFF/4.0.9', 'zlib/1.2.11', 'Python/2.7.15', 'Mesa/18.1.1', 'Qt/4.8.7', 'XZ/5.2.4', 'Eigen/3.3.7', 'XZ/5.2.4', 'Autotools/20180311']
== 2019-06-03 11:59:25,923 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:25,923 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:25,924 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:25,924 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python --terse list' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:26,020 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python --terse list': stdout: os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0:1\;/opt/ebmodules/all/Core:1\;/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "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";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "bGwvQ29tcGlsZXIvR0NDY29yZS83LjMuMC9od2xvYy8xLjExLjEwLmx1YSIsWyJmdWxsTmFtZSJdPSJod2xvYy8xLjExLjEwIixbImxvYWRPcmRlciJdPTcscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MixbInN0YXR1cyJdPSJhY3RpdmUiLFsidXNlck5hbWUiXT0iaHdsb2MvMS4xMS4xMCIsfSxudW1hY3RsPXtbImZuIl09Ii9vcHQvZWJtb2R1bGVzL2FsbC9Db21waWxlci9HQ0Njb3JlLzcuMy4wL251bWFjdGwvMi4wLjExLmx1YSIsWyJmdWxsTmFtZSJdPSJudW1hY3RsLzIuMC4xMSIsWyJsb2FkT3JkZXIiXT02LHByb3BUPXt9LFsic3RhY2tEZXB0aCJdPTMsWyJzdGF0dXMiXT0iYWN0aXZlIixbInVzZXJOYW1lIl09Im51bWFjdGwvMi4wLjExIix9LHpsaWI9e1siZm4iXT0i";
os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "b2R1bGVmaWxlcy9MaW51eCIsIi9vcHQvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL29wdC9tb2R1bGVmaWxlcy9MaW51eDovb3B0L2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9vcHQvZWJtb2R1bGVzL2FsbC9Db3JlIix9";
os.environ["_ModuleTable_Sz_"] = "8";
; stderr: EasyBuild/3.9.0
GCCcore/7.3.0
binutils/2.30
GCC/7.3.0-2.30
zlib/1.2.11
numactl/2.0.11
hwloc/1.11.10
OpenMPI/3.1.1
OpenBLAS/0.3.1
FFTW/3.3.8
ScaLAPACK/2.0.2-OpenBLAS-0.3.1
foss/2018b

== 2019-06-03 11:59:26,021 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python --terse list' ran fine
== 2019-06-03 11:59:26,021 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib'] to ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:26,022 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib')
== 2019-06-03 11:59:26,022 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:26,022 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:26,022 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:26,023 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:26,023 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:26,023 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python load LibTIFF/4.0.9' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:26,762 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python load LibTIFF/4.0.9': stdout: os.environ["__LMOD_REF_COUNT_CPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:1\;/opt/ebsofts/Core/GCCcore/7.3.0/include:1";
os.environ["CPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:/opt/ebsofts/Core/GCCcore/7.3.0/include";
os.environ["EBDEVELLIBTIFF"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/easybuild/Compiler-GCCcore-7.3.0-LibTIFF-4.0.9-easybuild-devel";
os.environ["EBROOTLIBTIFF"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9";
os.environ["EBVERSIONLIBTIFF"] = "4.0.9";
os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:1";
os.environ["LD_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib";
os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib64:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib:1";
os.environ["LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib";
os.environ["__LMOD_REF_COUNT_LOADEDMODULES"] = "EasyBuild/3.9.0:1\;GCCcore/7.3.0:1\;binutils/2.30:1\;GCC/7.3.0-2.30:1\;zlib/1.2.11:1\;numactl/2.0.11:1\;hwloc/1.11.10:1\;OpenMPI/3.1.1:1\;OpenBLAS/0.3.1:1\;FFTW/3.3.8:1\;ScaLAPACK/2.0.2-OpenBLAS-0.3.1:1\;foss/2018b:1\;LibTIFF/4.0.9:1";
os.environ["LOADEDMODULES"] = "EasyBuild/3.9.0:GCCcore/7.3.0:binutils/2.30:GCC/7.3.0-2.30:zlib/1.2.11:numactl/2.0.11:hwloc/1.11.10:OpenMPI/3.1.1:OpenBLAS/0.3.1:FFTW/3.3.8:ScaLAPACK/2.0.2-OpenBLAS-0.3.1:foss/2018b:LibTIFF/4.0.9";
os.environ["__LMOD_REF_COUNT_MANPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/share/man:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/share/man:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/share/man:1\;/opt/ebsofts/Core/GCCcore/7.3.0/share/man:1\;/opt/lmod/lmod/share/man:1\;/opt/c3-4/man:1";
os.environ["MANPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/share/man:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/share/man:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/share/man:/opt/ebsofts/Core/GCCcore/7.3.0/share/man:/opt/lmod/lmod/share/man::/opt/c3-4/man";
os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0:1\;/opt/ebmodules/all/Core:1\;/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core";
os.environ["__LMOD_REF_COUNT_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/bin:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/bin:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/bin:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/sbin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/bin:1\;/opt/ebsofts/Core/GCCcore/7.3.0/bin:1\;/opt/ebsofts/Core/EasyBuild/3.9.0/bin:1\;/usr/lib64/qt-3.3/bin:1\;/opt/cluster/admin:1\;/usr/local/bin:1\;/bin:1\;/usr/bin:1\;/usr/local/sbin:1\;/usr/sbin:1\;/sbin:1\;/opt/c3-4:1\;/opt/ibutils/bin:1\;/home/sagon/bin:1\;/opt/nodejs/bin:1";
os.environ["PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/bin:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/bin:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/bin:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/sbin:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/bin:/opt/ebsofts/Core/GCCcore/7.3.0/bin:/opt/ebsofts/Core/EasyBuild/3.9.0/bin:/usr/lib64/qt-3.3/bin:/opt/cluster/admin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/c3-4:/opt/ibutils/bin:/home/sagon/bin:/opt/nodejs/bin";
os.environ["__LMOD_REF_COUNT_PKG_CONFIG_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib/pkgconfig:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib/pkgconfig:1";
os.environ["PKG_CONFIG_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib/pkgconfig:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib/pkgconfig:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib/pkgconfig:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib/pkgconfig:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib/pkgconfig:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib/pkgconfig";
os.environ["__LMOD_REF_COUNT__LMFILES_"] = "/opt/ebmodules/all/Core/EasyBuild/3.9.0.lua:1\;/opt/ebmodules/all/Core/GCCcore/7.3.0.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/binutils/2.30.lua:1\;/opt/ebmodules/all/Core/GCC/7.3.0-2.30.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/zlib/1.2.11.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/numactl/2.0.11.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/hwloc/1.11.10.lua:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1.lua:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1.lua:1\;/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8.lua:1\;/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1.lua:1\;/opt/ebmodules/all/Core/foss/2018b.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9.lua:1";
os.environ["_LMFILES_"] = "/opt/ebmodules/all/Core/EasyBuild/3.9.0.lua:/opt/ebmodules/all/Core/GCCcore/7.3.0.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/binutils/2.30.lua:/opt/ebmodules/all/Core/GCC/7.3.0-2.30.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/zlib/1.2.11.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/numactl/2.0.11.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/hwloc/1.11.10.lua:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1.lua:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1.lua:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8.lua:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1.lua:/opt/ebmodules/all/Core/foss/2018b.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9.lua";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "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";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "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";
os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "aEE9eyIvb3B0L2VibW9kdWxlcy9hbGwvTVBJL0dDQy83LjMuMC0yLjMwL09wZW5NUEkvMy4xLjEiLCIvb3B0L2VibW9kdWxlcy9hbGwvQ29tcGlsZXIvR0NDLzcuMy4wLTIuMzAiLCIvb3B0L2VibW9kdWxlcy9hbGwvQ29tcGlsZXIvR0NDY29yZS83LjMuMCIsIi9vcHQvZWJtb2R1bGVzL2FsbC9Db3JlIiwiL29wdC9lYm1vZHVsZXMvYWxsIiwiL29wdC9tb2R1bGVmaWxlcy9MaW51eCIsIi9vcHQvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL29wdC9tb2R1bGVmaWxlcy9MaW51eDovb3B0L2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9vcHQvZWJtb2R1bGVzL2FsbC9Db3JlIix9";
os.environ["_ModuleTable_Sz_"] = "8";
; stderr: 
== 2019-06-03 11:59:26,762 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python load LibTIFF/4.0.9' ran fine
== 2019-06-03 11:59:26,763 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib'] to ['/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:26,764 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib')
== 2019-06-03 11:59:26,764 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:26,764 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:26,764 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:26,765 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:26,765 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:26,765 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python load zlib/1.2.11' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:27,488 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python load zlib/1.2.11': stdout: os.environ["__LMOD_REF_COUNT_CPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:1\;/opt/ebsofts/Core/GCCcore/7.3.0/include:1";
os.environ["CPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:/opt/ebsofts/Core/GCCcore/7.3.0/include";
os.environ["EBDEVELZLIB"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/easybuild/Compiler-GCCcore-7.3.0-zlib-1.2.11-easybuild-devel";
os.environ["EBROOTZLIB"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11";
os.environ["EBVERSIONZLIB"] = "1.2.11";
os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:1";
os.environ["LD_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib";
os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib64:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib:1";
os.environ["LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib";
os.environ["__LMOD_REF_COUNT_LOADEDMODULES"] = "EasyBuild/3.9.0:1\;GCCcore/7.3.0:1\;binutils/2.30:1\;GCC/7.3.0-2.30:1\;numactl/2.0.11:1\;hwloc/1.11.10:1\;OpenMPI/3.1.1:1\;OpenBLAS/0.3.1:1\;FFTW/3.3.8:1\;ScaLAPACK/2.0.2-OpenBLAS-0.3.1:1\;foss/2018b:1\;LibTIFF/4.0.9:1\;zlib/1.2.11:1";
os.environ["LOADEDMODULES"] = "EasyBuild/3.9.0:GCCcore/7.3.0:binutils/2.30:GCC/7.3.0-2.30:numactl/2.0.11:hwloc/1.11.10:OpenMPI/3.1.1:OpenBLAS/0.3.1:FFTW/3.3.8:ScaLAPACK/2.0.2-OpenBLAS-0.3.1:foss/2018b:LibTIFF/4.0.9:zlib/1.2.11";
os.environ["__LMOD_REF_COUNT_MANPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/share/man:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/share/man:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/share/man:1\;/opt/ebsofts/Core/GCCcore/7.3.0/share/man:1\;/opt/lmod/lmod/share/man:1\;/opt/c3-4/man:1";
os.environ["MANPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/share/man:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/share/man:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/share/man:/opt/ebsofts/Core/GCCcore/7.3.0/share/man:/opt/lmod/lmod/share/man::/opt/c3-4/man";
os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0:1\;/opt/ebmodules/all/Core:1\;/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core";
os.environ["__LMOD_REF_COUNT_PKG_CONFIG_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib/pkgconfig:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib/pkgconfig:1";
os.environ["PKG_CONFIG_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib/pkgconfig:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib/pkgconfig:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib/pkgconfig:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib/pkgconfig:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib/pkgconfig:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib/pkgconfig";
os.environ["__LMOD_REF_COUNT__LMFILES_"] = "/opt/ebmodules/all/Core/EasyBuild/3.9.0.lua:1\;/opt/ebmodules/all/Core/GCCcore/7.3.0.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/binutils/2.30.lua:1\;/opt/ebmodules/all/Core/GCC/7.3.0-2.30.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/numactl/2.0.11.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/hwloc/1.11.10.lua:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1.lua:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1.lua:1\;/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8.lua:1\;/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1.lua:1\;/opt/ebmodules/all/Core/foss/2018b.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9.lua:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0/zlib/1.2.11.lua:1";
os.environ["_LMFILES_"] = "/opt/ebmodules/all/Core/EasyBuild/3.9.0.lua:/opt/ebmodules/all/Core/GCCcore/7.3.0.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/binutils/2.30.lua:/opt/ebmodules/all/Core/GCC/7.3.0-2.30.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/numactl/2.0.11.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/hwloc/1.11.10.lua:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1.lua:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1.lua:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8.lua:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1.lua:/opt/ebmodules/all/Core/foss/2018b.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9.lua:/opt/ebmodules/all/Compiler/GCCcore/7.3.0/zlib/1.2.11.lua";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "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";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "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";
os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "aEE9eyIvb3B0L2VibW9kdWxlcy9hbGwvTVBJL0dDQy83LjMuMC0yLjMwL09wZW5NUEkvMy4xLjEiLCIvb3B0L2VibW9kdWxlcy9hbGwvQ29tcGlsZXIvR0NDLzcuMy4wLTIuMzAiLCIvb3B0L2VibW9kdWxlcy9hbGwvQ29tcGlsZXIvR0NDY29yZS83LjMuMCIsIi9vcHQvZWJtb2R1bGVzL2FsbC9Db3JlIiwiL29wdC9lYm1vZHVsZXMvYWxsIiwiL29wdC9tb2R1bGVmaWxlcy9MaW51eCIsIi9vcHQvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL29wdC9tb2R1bGVmaWxlcy9MaW51eDovb3B0L2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9vcHQvZWJtb2R1bGVzL2FsbC9Db3JlIix9";
os.environ["_ModuleTable_Sz_"] = "8";
; stderr: 
== 2019-06-03 11:59:27,488 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python load zlib/1.2.11' ran fine
== 2019-06-03 11:59:27,489 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib'] to ['/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:27,495 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib')
== 2019-06-03 11:59:27,495 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:27,495 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:27,495 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:27,496 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:27,496 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:27,496 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python load Python/2.7.15' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:28,441 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python load Python/2.7.15': stdout: os.environ["__LMOD_REF_COUNT_CPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:1\;/opt/ebsofts/Core/GCCcore/7.3.0/include:1";
os.environ["CPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:/opt/ebsofts/Core/GCCcore/7.3.0/include";
os.environ["EBDEVELBZIP2"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/easybuild/Compiler-GCCcore-7.3.0-bzip2-1.0.6-easybuild-devel";
os.environ["EBDEVELGMP"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/easybuild/Compiler-GCCcore-7.3.0-GMP-6.1.2-easybuild-devel";
os.environ["EBDEVELLIBFFI"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/easybuild/Compiler-GCCcore-7.3.0-libffi-3.2.1-easybuild-devel";
os.environ["EBDEVELLIBREADLINE"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/easybuild/Compiler-GCCcore-7.3.0-libreadline-7.0-easybuild-devel";
os.environ["EBDEVELNCURSES"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/easybuild/Compiler-GCCcore-7.3.0-ncurses-6.1-easybuild-devel";
os.environ["EBDEVELPYTHON"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/easybuild/MPI-GCC-7.3.0-2.30-OpenMPI-3.1.1-Python-2.7.15-easybuild-devel";
os.environ["EBDEVELSQLITE"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/easybuild/Compiler-GCCcore-7.3.0-SQLite-3.24.0-easybuild-devel";
os.environ["EBDEVELTCL"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/easybuild/Compiler-GCCcore-7.3.0-Tcl-8.6.8-easybuild-devel";
os.environ["EBEXTSLISTPYTHON"] = "setuptools-39.2.0,pip-10.0.1,nose-1.3.7,numpy-1.14.5,scipy-1.1.0,blist-1.3.6,mpi4py-3.0.0,paycheck-1.0.2,pbr-4.0.4,Cython-0.28.3,six-1.11.0,python-dateutil-2.7.3,deap-1.2.2,decorator-4.3.0,liac-arff-2.2.2,pycrypto-2.6.1,ecdsa-0.13,enum34-1.1.6,ipaddress-1.0.22,asn1crypto-0.24.0,idna-2.7,cryptography-2.2.2,pyasn1-0.4.3,PyNaCl-1.2.1,bcrypt-3.1.4,paramiko-2.4.1,pyparsing-2.2.0,netifaces-0.10.7,netaddr-0.7.19,funcsigs-1.0.2,mock-2.0.0,pytz-2018.4,bitstring-3.1.5,virtualenv-16.0.0,docopt-0.6.2,joblib-0.11,chardet-3.0.4,certifi-2018.4.16,urllib3-1.23,requests-2.19.1,xlrd-1.1.0,py_expression_eval-0.3.4";
os.environ["EBROOTBZIP2"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6";
os.environ["EBROOTGMP"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2";
os.environ["EBROOTLIBFFI"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1";
os.environ["EBROOTLIBREADLINE"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0";
os.environ["EBROOTNCURSES"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1";
os.environ["EBROOTPYTHON"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15";
os.environ["EBROOTSQLITE"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0";
os.environ["EBROOTTCL"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8";
os.environ["EBVERSIONBZIP2"] = "1.0.6";
os.environ["EBVERSIONGMP"] = "6.1.2";
os.environ["EBVERSIONLIBFFI"] = "3.2.1";
os.environ["EBVERSIONLIBREADLINE"] = "7.0";
os.environ["EBVERSIONNCURSES"] = "6.1";
os.environ["EBVERSIONPYTHON"] = "2.7.15";
os.environ["EBVERSIONSQLITE"] = "3.24.0";
os.environ["EBVERSIONTCL"] = "8.6.8";
os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:1";
os.environ["LD_LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib";
os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib64:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib:1";
os.environ["LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib";
os.environ["__LMOD_REF_COUNT_LOADEDMODULES"] = "EasyBuild/3.9.0:1\;GCCcore/7.3.0:1\;binutils/2.30:1\;GCC/7.3.0-2.30:1\;numactl/2.0.11:1\;hwloc/1.11.10:1\;OpenMPI/3.1.1:1\;OpenBLAS/0.3.1:1\;FFTW/3.3.8:1\;ScaLAPACK/2.0.2-OpenBLAS-0.3.1:1\;foss/2018b:1\;LibTIFF/4.0.9:1\;zlib/1.2.11:1\;bzip2/1.0.6:1\;ncurses/6.1:1\;libreadline/7.0:1\;Tcl/8.6.8:1\;SQLite/3.24.0:1\;GMP/6.1.2:1\;libffi/3.2.1:1\;Python/2.7.15:1";
os.environ["LOADEDMODULES"] = "EasyBuild/3.9.0:GCCcore/7.3.0:binutils/2.30:GCC/7.3.0-2.30:numactl/2.0.11:hwloc/1.11.10:OpenMPI/3.1.1:OpenBLAS/0.3.1:FFTW/3.3.8:ScaLAPACK/2.0.2-OpenBLAS-0.3.1:foss/2018b:LibTIFF/4.0.9:zlib/1.2.11:bzip2/1.0.6:ncurses/6.1:libreadline/7.0:Tcl/8.6.8:SQLite/3.24.0:GMP/6.1.2:libffi/3.2.1:Python/2.7.15";
os.environ["__LMOD_REF_COUNT_MANPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/share/man:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/share/man:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/share/man:1\;/opt/ebsofts/Core/GCCcore/7.3.0/share/man:1\;/opt/lmod/lmod/share/man:1\;/opt/c3-4/man:1";
os.environ["MANPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/share/man:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/share/man:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/share/man:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/share/man:/opt/ebsofts/Core/GCCcore/7.3.0/share/man:/opt/lmod/lmod/share/man::/opt/c3-4/man";
os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0:1\;/opt/ebmodules/all/Core:1\;/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core";
os.environ["__LMOD_REF_COUNT_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/bin:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/bin:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/bin:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/sbin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/bin:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/bin:1\;/opt/ebsofts/Core/GCCcore/7.3.0/bin:1\;/opt/ebsofts/Core/EasyBuild/3.9.0/bin:1\;/usr/lib64/qt-3.3/bin:1\;/opt/cluster/admin:1\;/usr/local/bin:1\;/bin:1\;/usr/bin:1\;/usr/local/sbin:1\;/usr/sbin:1\;/sbin:1\;/opt/c3-4:1\;/opt/ibutils/bin:1\;/home/sagon/bin:1\;/opt/nodejs/bin:1";
os.environ["PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/bin:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/bin:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/bin:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/sbin:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/bin:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/bin:/opt/ebsofts/Core/GCCcore/7.3.0/bin:/opt/ebsofts/Core/EasyBuild/3.9.0/bin:/usr/lib64/qt-3.3/bin:/opt/cluster/admin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/c3-4:/opt/ibutils/bin:/home/sagon/bin:/opt/nodejs/bin";
os.environ["__LMOD_REF_COUNT_PKG_CONFIG_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib/pkgconfig:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib/pkgconfig:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib/pkgconfig:1";
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os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "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";
os.environ["_ModuleTable009_"] = "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";
os.environ["_ModuleTable010_"] = "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";
os.environ["_ModuleTable011_"] = "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";
os.environ["_ModuleTable012_"] = "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";
os.environ["_ModuleTable013_"] = "cy9hbGwvQ29yZSIsfQ==";
os.environ["_ModuleTable_Sz_"] = "13";
; stderr: 
== 2019-06-03 11:59:28,442 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python load Python/2.7.15' ran fine
== 2019-06-03 11:59:28,443 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib'] to ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:28,444 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib')
== 2019-06-03 11:59:28,444 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:28,444 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:28,444 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:28,445 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:28,445 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:28,445 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python load Mesa/18.1.1' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:29,983 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python load Mesa/18.1.1': stdout: os.environ["__LMOD_REF_COUNT_ACLOCAL_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/share/aclocal:1";
os.environ["ACLOCAL_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/share/aclocal";
os.environ["__LMOD_REF_COUNT_CPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:1\;/opt/ebsofts/Core/GCCcore/7.3.0/include:1";
os.environ["CPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:/opt/ebsofts/Core/GCCcore/7.3.0/include";
os.environ["EBDEVELEXPAT"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/easybuild/Compiler-GCCcore-7.3.0-expat-2.2.5-easybuild-devel";
os.environ["EBDEVELFONTCONFIG"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/easybuild/Compiler-GCCcore-7.3.0-fontconfig-2.13.0-easybuild-devel";
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os.environ["_ModuleTable008_"] = "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";
os.environ["_ModuleTable009_"] = "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";
os.environ["_ModuleTable010_"] = "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";
os.environ["_ModuleTable011_"] = "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";
os.environ["_ModuleTable012_"] = "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";
os.environ["_ModuleTable013_"] = "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";
os.environ["_ModuleTable014_"] = "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";
os.environ["_ModuleTable015_"] = "T3JkZXIiXT0xNSxwcm9wVD17fSxbInN0YWNrRGVwdGgiXT0yLFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJuY3Vyc2VzLzYuMSIsfSxuZXR0bGU9e1siZm4iXT0iL29wdC9lYm1vZHVsZXMvYWxsL01QSS9HQ0MvNy4zLjAtMi4zMC9PcGVuTVBJLzMuMS4xL25ldHRsZS8zLjQubHVhIixbImZ1bGxOYW1lIl09Im5ldHRsZS8zLjQiLFsibG9hZE9yZGVyIl09MjIscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MSxbInN0YXR1cyJdPSJhY3RpdmUiLFsidXNlck5hbWUiXT0ibmV0dGxlLzMuNCIsfSxudW1hY3RsPXtbImZuIl09Ii9vcHQvZWJtb2R1bGVzL2FsbC9Db21waWxlci9HQ0Njb3JlLzcuMy4wL251bWFjdGwvMi4wLjExLmx1YSIsWyJmdWxsTmFtZSJdPSJudW1h";
os.environ["_ModuleTable016_"] = "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";
os.environ["_ModuleTable017_"] = "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";
os.environ["_ModuleTable018_"] = "ZXMvTGludXgiLCIvb3B0L2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9vcHQvbW9kdWxlZmlsZXMvTGludXg6L29wdC9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZTovb3B0L2VibW9kdWxlcy9hbGwvQ29yZSIsfQ==";
os.environ["_ModuleTable_Sz_"] = "18";
; stderr: 
== 2019-06-03 11:59:29,983 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python load Mesa/18.1.1' ran fine
== 2019-06-03 11:59:29,985 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64'] to ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:29,986 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64')
== 2019-06-03 11:59:29,986 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:29,986 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:29,986 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:29,987 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:29,987 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:29,987 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python load Qt/4.8.7' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:31,048 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python load Qt/4.8.7': stdout: os.environ["__LMOD_REF_COUNT_ACLOCAL_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/share/aclocal:1";
os.environ["ACLOCAL_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/share/aclocal";
os.environ["__LMOD_REF_COUNT_CPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include/libxml2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:1\;/opt/ebsofts/Core/GCCcore/7.3.0/include:1";
os.environ["CPATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include/libxml2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:/opt/ebsofts/Core/GCCcore/7.3.0/include";
os.environ["EBDEVELGETTEXT"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/easybuild/Compiler-GCCcore-7.3.0-gettext-0.19.8.1-easybuild-devel";
os.environ["EBDEVELGLIB"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/easybuild/Compiler-GCCcore-7.3.0-GLib-2.54.3-easybuild-devel";
os.environ["EBDEVELLIBGLU"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/easybuild/MPI-GCC-7.3.0-2.30-OpenMPI-3.1.1-libGLU-9.0.0-easybuild-devel";
os.environ["EBDEVELLIBJPEGMINTURBO"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/easybuild/Compiler-GCCcore-7.3.0-libjpeg-turbo-2.0.0-easybuild-devel";
os.environ["EBDEVELLIBXML2"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/easybuild/Compiler-GCCcore-7.3.0-libxml2-2.9.8-easybuild-devel";
os.environ["EBDEVELNASM"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/NASM/2.13.03/easybuild/Compiler-GCCcore-7.3.0-NASM-2.13.03-easybuild-devel";
os.environ["EBDEVELPCRE"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/easybuild/Compiler-GCCcore-7.3.0-PCRE-8.41-easybuild-devel";
os.environ["EBDEVELQT"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/easybuild/MPI-GCC-7.3.0-2.30-OpenMPI-3.1.1-Qt-4.8.7-easybuild-devel";
os.environ["EBDEVELXZ"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/easybuild/Compiler-GCCcore-7.3.0-XZ-5.2.4-easybuild-devel";
os.environ["EBROOTGETTEXT"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1";
os.environ["EBROOTGLIB"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3";
os.environ["EBROOTLIBGLU"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0";
os.environ["EBROOTLIBJPEGMINTURBO"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0";
os.environ["EBROOTLIBXML2"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8";
os.environ["EBROOTNASM"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/NASM/2.13.03";
os.environ["EBROOTPCRE"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41";
os.environ["EBROOTQT"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7";
os.environ["EBROOTXZ"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4";
os.environ["EBVERSIONGETTEXT"] = "0.19.8.1";
os.environ["EBVERSIONGLIB"] = "2.54.3";
os.environ["EBVERSIONLIBGLU"] = "9.0.0";
os.environ["EBVERSIONLIBJPEGMINTURBO"] = "2.0.0";
os.environ["EBVERSIONLIBXML2"] = "2.9.8";
os.environ["EBVERSIONNASM"] = "2.13.03";
os.environ["EBVERSIONPCRE"] = "8.41";
os.environ["EBVERSIONQT"] = "4.8.7";
os.environ["EBVERSIONXZ"] = "5.2.4";
os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:1";
os.environ["LD_LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib";
os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib64:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib:1";
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os.environ["_ModuleTable020_"] = "LzcuMy4wLTIuMzAvT3Blbk1QSS8zLjEuMS9uZXR0bGUvMy40Lmx1YSIsWyJmdWxsTmFtZSJdPSJuZXR0bGUvMy40IixbImxvYWRPcmRlciJdPTIyLHByb3BUPXt9LFsic3RhY2tEZXB0aCJdPTEsWyJzdGF0dXMiXT0iYWN0aXZlIixbInVzZXJOYW1lIl09Im5ldHRsZS8zLjQiLH0sbnVtYWN0bD17WyJmbiJdPSIvb3B0L2VibW9kdWxlcy9hbGwvQ29tcGlsZXIvR0NDY29yZS83LjMuMC9udW1hY3RsLzIuMC4xMS5sdWEiLFsiZnVsbE5hbWUiXT0ibnVtYWN0bC8yLjAuMTEiLFsibG9hZE9yZGVyIl09NSxwcm9wVD17fSxbInN0YWNrRGVwdGgiXT0zLFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJudW1hY3RsLzIuMC4xMSIsfSxbInV0aWwtbGludXgiXT17WyJmbiJd";
os.environ["_ModuleTable021_"] = "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";
os.environ["_ModuleTable022_"] = "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";
os.environ["_ModuleTable023_"] = "Ym1vZHVsZXMvYWxsL0NvcmUiLH0=";
os.environ["_ModuleTable_Sz_"] = "23";
; stderr: 
== 2019-06-03 11:59:31,049 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python load Qt/4.8.7' ran fine
== 2019-06-03 11:59:31,051 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib'] to ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:31,051 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib')
== 2019-06-03 11:59:31,051 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:31,051 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:31,052 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:31,052 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:31,052 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:31,052 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python load XZ/5.2.4' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:31,903 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python load XZ/5.2.4': stdout: os.environ["__LMOD_REF_COUNT_CPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include/libxml2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:1\;/opt/ebsofts/Core/GCCcore/7.3.0/include:1";
os.environ["CPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include/libxml2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:/opt/ebsofts/Core/GCCcore/7.3.0/include";
os.environ["EBDEVELXZ"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/easybuild/Compiler-GCCcore-7.3.0-XZ-5.2.4-easybuild-devel";
os.environ["EBROOTXZ"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4";
os.environ["EBVERSIONXZ"] = "5.2.4";
os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:1";
os.environ["LD_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib";
os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib64:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib:1";
os.environ["LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib";
os.environ["__LMOD_REF_COUNT_LOADEDMODULES"] = "EasyBuild/3.9.0:1\;GCCcore/7.3.0:1\;binutils/2.30:1\;GCC/7.3.0-2.30:1\;numactl/2.0.11:1\;hwloc/1.11.10:1\;OpenMPI/3.1.1:1\;OpenBLAS/0.3.1:1\;FFTW/3.3.8:1\;ScaLAPACK/2.0.2-OpenBLAS-0.3.1:1\;foss/2018b:1\;LibTIFF/4.0.9:1\;zlib/1.2.11:1\;bzip2/1.0.6:1\;ncurses/6.1:1\;libreadline/7.0:1\;Tcl/8.6.8:1\;SQLite/3.24.0:1\;GMP/6.1.2:1\;libffi/3.2.1:1\;Python/2.7.15:1\;nettle/3.4:1\;expat/2.2.5:1\;libpng/1.6.34:1\;freetype/2.9.1:1\;util-linux/2.32:1\;fontconfig/2.13.0:1\;X11/20180604:1\;libdrm/2.4.92:1\;LLVM/6.0.0:1\;Mesa/18.1.1:1\;libxml2/2.9.8:1\;gettext/0.19.8.1:1\;PCRE/8.41:1\;GLib/2.54.3:1\;libGLU/9.0.0:1\;NASM/2.13.03:1\;libjpeg-turbo/2.0.0:1\;Qt/4.8.7:1\;XZ/5.2.4:1";
os.environ["LOADEDMODULES"] = "EasyBuild/3.9.0:GCCcore/7.3.0:binutils/2.30:GCC/7.3.0-2.30:numactl/2.0.11:hwloc/1.11.10:OpenMPI/3.1.1:OpenBLAS/0.3.1:FFTW/3.3.8:ScaLAPACK/2.0.2-OpenBLAS-0.3.1:foss/2018b:LibTIFF/4.0.9:zlib/1.2.11:bzip2/1.0.6:ncurses/6.1:libreadline/7.0:Tcl/8.6.8:SQLite/3.24.0:GMP/6.1.2:libffi/3.2.1:Python/2.7.15:nettle/3.4:expat/2.2.5:libpng/1.6.34:freetype/2.9.1:util-linux/2.32:fontconfig/2.13.0:X11/20180604:libdrm/2.4.92:LLVM/6.0.0:Mesa/18.1.1:libxml2/2.9.8:gettext/0.19.8.1:PCRE/8.41:GLib/2.54.3:libGLU/9.0.0:NASM/2.13.03:libjpeg-turbo/2.0.0:Qt/4.8.7:XZ/5.2.4";
os.environ["__LMOD_REF_COUNT_MANPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/NASM/2.13.03/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/share/man:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/share/man:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/share/man:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/share/man:1\;/opt/ebsofts/Core/GCCcore/7.3.0/share/man:1\;/opt/lmod/lmod/share/man:1\;/opt/c3-4/man:1";
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os.environ["_ModuleTable013_"] = "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";
os.environ["_ModuleTable014_"] = "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";
os.environ["_ModuleTable015_"] = "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";
os.environ["_ModuleTable016_"] = "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";
os.environ["_ModuleTable017_"] = "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";
os.environ["_ModuleTable018_"] = "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";
os.environ["_ModuleTable019_"] = "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";
os.environ["_ModuleTable020_"] = "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";
os.environ["_ModuleTable021_"] = "PSIvb3B0L2VibW9kdWxlcy9hbGwvQ29tcGlsZXIvR0NDY29yZS83LjMuMC91dGlsLWxpbnV4LzIuMzIubHVhIixbImZ1bGxOYW1lIl09InV0aWwtbGludXgvMi4zMiIsWyJsb2FkT3JkZXIiXT0yNixwcm9wVD17fSxbInN0YWNrRGVwdGgiXT00LFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJ1dGlsLWxpbnV4LzIuMzIiLH0semxpYj17WyJmbiJdPSIvb3B0L2VibW9kdWxlcy9hbGwvQ29tcGlsZXIvR0NDY29yZS83LjMuMC96bGliLzEuMi4xMS5sdWEiLFsiZnVsbE5hbWUiXT0iemxpYi8xLjIuMTEiLFsibG9hZE9yZGVyIl09MTMscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MCxbInN0YXR1cyJdPSJhY3RpdmUiLFsidXNlck5hbWUiXT0iemxpYi8xLjIuMTEiLH0s";
os.environ["_ModuleTable022_"] = "fSxtcGF0aEE9eyIvb3B0L2VibW9kdWxlcy9hbGwvQ29tcGlsZXIvTExWTS82LjAuMCIsIi9vcHQvZWJtb2R1bGVzL2FsbC9NUEkvR0NDLzcuMy4wLTIuMzAvT3Blbk1QSS8zLjEuMSIsIi9vcHQvZWJtb2R1bGVzL2FsbC9Db21waWxlci9HQ0MvNy4zLjAtMi4zMCIsIi9vcHQvZWJtb2R1bGVzL2FsbC9Db21waWxlci9HQ0Njb3JlLzcuMy4wIiwiL29wdC9lYm1vZHVsZXMvYWxsL0NvcmUiLCIvb3B0L2VibW9kdWxlcy9hbGwiLCIvb3B0L21vZHVsZWZpbGVzL0xpbnV4IiwiL29wdC9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvb3B0L21vZHVsZWZpbGVzL0xpbnV4Oi9vcHQvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmU6L29wdC9l";
os.environ["_ModuleTable023_"] = "Ym1vZHVsZXMvYWxsL0NvcmUiLH0=";
os.environ["_ModuleTable_Sz_"] = "23";
; stderr: 
== 2019-06-03 11:59:31,904 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python load XZ/5.2.4' ran fine
== 2019-06-03 11:59:31,906 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib'] to ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:31,906 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib')
== 2019-06-03 11:59:31,906 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:31,907 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:31,907 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:31,907 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:31,908 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:31,908 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python load Eigen/3.3.7' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:32,807 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python load Eigen/3.3.7': stdout: os.environ["__LMOD_REF_COUNT_CPATH"] = "/opt/ebsofts/Core/Eigen/3.3.7/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include/libxml2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:1\;/opt/ebsofts/Core/GCCcore/7.3.0/include:1";
os.environ["CPATH"] = "/opt/ebsofts/Core/Eigen/3.3.7/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include/libxml2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:/opt/ebsofts/Core/GCCcore/7.3.0/include";
os.environ["__LMOD_REF_COUNT_CPLUS_INCLUDE_PATH"] = "/opt/ebsofts/Core/Eigen/3.3.7/include:1";
os.environ["CPLUS_INCLUDE_PATH"] = "/opt/ebsofts/Core/Eigen/3.3.7/include";
os.environ["EBDEVELEIGEN"] = "/opt/ebsofts/Core/Eigen/3.3.7/easybuild/Core-Eigen-3.3.7-easybuild-devel";
os.environ["EBROOTEIGEN"] = "/opt/ebsofts/Core/Eigen/3.3.7";
os.environ["EBVERSIONEIGEN"] = "3.3.7";
os.environ["__LMOD_REF_COUNT_LOADEDMODULES"] = "EasyBuild/3.9.0:1\;GCCcore/7.3.0:1\;binutils/2.30:1\;GCC/7.3.0-2.30:1\;numactl/2.0.11:1\;hwloc/1.11.10:1\;OpenMPI/3.1.1:1\;OpenBLAS/0.3.1:1\;FFTW/3.3.8:1\;ScaLAPACK/2.0.2-OpenBLAS-0.3.1:1\;foss/2018b:1\;LibTIFF/4.0.9:1\;zlib/1.2.11:1\;bzip2/1.0.6:1\;ncurses/6.1:1\;libreadline/7.0:1\;Tcl/8.6.8:1\;SQLite/3.24.0:1\;GMP/6.1.2:1\;libffi/3.2.1:1\;Python/2.7.15:1\;nettle/3.4:1\;expat/2.2.5:1\;libpng/1.6.34:1\;freetype/2.9.1:1\;util-linux/2.32:1\;fontconfig/2.13.0:1\;X11/20180604:1\;libdrm/2.4.92:1\;LLVM/6.0.0:1\;Mesa/18.1.1:1\;libxml2/2.9.8:1\;gettext/0.19.8.1:1\;PCRE/8.41:1\;GLib/2.54.3:1\;libGLU/9.0.0:1\;NASM/2.13.03:1\;libjpeg-turbo/2.0.0:1\;Qt/4.8.7:1\;XZ/5.2.4:1\;Eigen/3.3.7:1";
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os.environ["_ModuleTable023_"] = "L2FsbC9Db3JlIiwiL29wdC9lYm1vZHVsZXMvYWxsIiwiL29wdC9tb2R1bGVmaWxlcy9MaW51eCIsIi9vcHQvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL29wdC9tb2R1bGVmaWxlcy9MaW51eDovb3B0L2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9vcHQvZWJtb2R1bGVzL2FsbC9Db3JlIix9";
os.environ["_ModuleTable_Sz_"] = "23";
; stderr: 
== 2019-06-03 11:59:32,807 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python load Eigen/3.3.7' ran fine
== 2019-06-03 11:59:32,808 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib'] to ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:32,809 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib')
== 2019-06-03 11:59:32,809 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:32,809 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:32,809 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:32,810 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:32,810 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:32,810 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python load XZ/5.2.4' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:33,708 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python load XZ/5.2.4': stdout: os.environ["__LMOD_REF_COUNT_CPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include:1\;/opt/ebsofts/Core/Eigen/3.3.7/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include/libxml2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:1\;/opt/ebsofts/Core/GCCcore/7.3.0/include:1";
os.environ["CPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include:/opt/ebsofts/Core/Eigen/3.3.7/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include/libxml2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:/opt/ebsofts/Core/GCCcore/7.3.0/include";
os.environ["EBDEVELXZ"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/easybuild/Compiler-GCCcore-7.3.0-XZ-5.2.4-easybuild-devel";
os.environ["EBROOTXZ"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4";
os.environ["EBVERSIONXZ"] = "5.2.4";
os.environ["LD_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib";
os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib64:1\;/opt/ebsofts/Core/GCCcore/7.3.0/lib:1";
os.environ["LIBRARY_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib";
os.environ["__LMOD_REF_COUNT_LOADEDMODULES"] = "EasyBuild/3.9.0:1\;GCCcore/7.3.0:1\;binutils/2.30:1\;GCC/7.3.0-2.30:1\;numactl/2.0.11:1\;hwloc/1.11.10:1\;OpenMPI/3.1.1:1\;OpenBLAS/0.3.1:1\;FFTW/3.3.8:1\;ScaLAPACK/2.0.2-OpenBLAS-0.3.1:1\;foss/2018b:1\;LibTIFF/4.0.9:1\;zlib/1.2.11:1\;bzip2/1.0.6:1\;ncurses/6.1:1\;libreadline/7.0:1\;Tcl/8.6.8:1\;SQLite/3.24.0:1\;GMP/6.1.2:1\;libffi/3.2.1:1\;Python/2.7.15:1\;nettle/3.4:1\;expat/2.2.5:1\;libpng/1.6.34:1\;freetype/2.9.1:1\;util-linux/2.32:1\;fontconfig/2.13.0:1\;X11/20180604:1\;libdrm/2.4.92:1\;LLVM/6.0.0:1\;Mesa/18.1.1:1\;libxml2/2.9.8:1\;gettext/0.19.8.1:1\;PCRE/8.41:1\;GLib/2.54.3:1\;libGLU/9.0.0:1\;NASM/2.13.03:1\;libjpeg-turbo/2.0.0:1\;Qt/4.8.7:1\;Eigen/3.3.7:1\;XZ/5.2.4:1";
os.environ["LOADEDMODULES"] = "EasyBuild/3.9.0:GCCcore/7.3.0:binutils/2.30:GCC/7.3.0-2.30:numactl/2.0.11:hwloc/1.11.10:OpenMPI/3.1.1:OpenBLAS/0.3.1:FFTW/3.3.8:ScaLAPACK/2.0.2-OpenBLAS-0.3.1:foss/2018b:LibTIFF/4.0.9:zlib/1.2.11:bzip2/1.0.6:ncurses/6.1:libreadline/7.0:Tcl/8.6.8:SQLite/3.24.0:GMP/6.1.2:libffi/3.2.1:Python/2.7.15:nettle/3.4:expat/2.2.5:libpng/1.6.34:freetype/2.9.1:util-linux/2.32:fontconfig/2.13.0:X11/20180604:libdrm/2.4.92:LLVM/6.0.0:Mesa/18.1.1:libxml2/2.9.8:gettext/0.19.8.1:PCRE/8.41:GLib/2.54.3:libGLU/9.0.0:NASM/2.13.03:libjpeg-turbo/2.0.0:Qt/4.8.7:Eigen/3.3.7:XZ/5.2.4";
os.environ["__LMOD_REF_COUNT_MANPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/NASM/2.13.03/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/share/man:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/share/man:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/share/man:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/share/man:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/share/man:1\;/opt/ebsofts/Core/GCCcore/7.3.0/share/man:1\;/opt/lmod/lmod/share/man:1\;/opt/c3-4/man:1";
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os.environ["_ModuleTable010_"] = "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";
os.environ["_ModuleTable011_"] = "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";
os.environ["_ModuleTable012_"] = "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";
os.environ["_ModuleTable013_"] = "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";
os.environ["_ModuleTable014_"] = "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";
os.environ["_ModuleTable015_"] = "MSIsfSxnZXR0ZXh0PXtbImZuIl09Ii9vcHQvZWJtb2R1bGVzL2FsbC9Db21waWxlci9HQ0Njb3JlLzcuMy4wL2dldHRleHQvMC4xOS44LjEubHVhIixbImZ1bGxOYW1lIl09ImdldHRleHQvMC4xOS44LjEiLFsibG9hZE9yZGVyIl09MzMscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MixbInN0YXR1cyJdPSJhY3RpdmUiLFsidXNlck5hbWUiXT0iZ2V0dGV4dC8wLjE5LjguMSIsfSxod2xvYz17WyJmbiJdPSIvb3B0L2VibW9kdWxlcy9hbGwvQ29tcGlsZXIvR0NDY29yZS83LjMuMC9od2xvYy8xLjExLjEwLmx1YSIsWyJmdWxsTmFtZSJdPSJod2xvYy8xLjExLjEwIixbImxvYWRPcmRlciJdPTYscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MixbInN0YXR1cyJdPSJhY3RpdmUiLFsi";
os.environ["_ModuleTable016_"] = "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";
os.environ["_ModuleTable017_"] = "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";
os.environ["_ModuleTable018_"] = "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";
os.environ["_ModuleTable019_"] = "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";
os.environ["_ModuleTable020_"] = "cnNlcy82LjEubHVhIixbImZ1bGxOYW1lIl09Im5jdXJzZXMvNi4xIixbImxvYWRPcmRlciJdPTE1LHByb3BUPXt9LFsic3RhY2tEZXB0aCJdPTIsWyJzdGF0dXMiXT0iYWN0aXZlIixbInVzZXJOYW1lIl09Im5jdXJzZXMvNi4xIix9LG5ldHRsZT17WyJmbiJdPSIvb3B0L2VibW9kdWxlcy9hbGwvTVBJL0dDQy83LjMuMC0yLjMwL09wZW5NUEkvMy4xLjEvbmV0dGxlLzMuNC5sdWEiLFsiZnVsbE5hbWUiXT0ibmV0dGxlLzMuNCIsWyJsb2FkT3JkZXIiXT0yMixwcm9wVD17fSxbInN0YWNrRGVwdGgiXT0xLFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJuZXR0bGUvMy40Iix9LG51bWFjdGw9e1siZm4iXT0iL29wdC9lYm1vZHVsZXMvYWxsL0NvbXBpbGVyL0dDQ2Nv";
os.environ["_ModuleTable021_"] = "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";
os.environ["_ModuleTable022_"] = "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";
os.environ["_ModuleTable023_"] = "L2FsbC9Db3JlIiwiL29wdC9lYm1vZHVsZXMvYWxsIiwiL29wdC9tb2R1bGVmaWxlcy9MaW51eCIsIi9vcHQvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL29wdC9tb2R1bGVmaWxlcy9MaW51eDovb3B0L2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9vcHQvZWJtb2R1bGVzL2FsbC9Db3JlIix9";
os.environ["_ModuleTable_Sz_"] = "23";
; stderr: 
== 2019-06-03 11:59:33,709 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python load XZ/5.2.4' ran fine
== 2019-06-03 11:59:33,710 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib'] to ['/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:33,710 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib')
== 2019-06-03 11:59:33,710 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:33,711 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:33,711 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:33,711 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:33,711 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:33,711 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python load Autotools/20180311' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:34,730 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python load Autotools/20180311': stdout: os.environ["__LMOD_REF_COUNT_ACLOCAL_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libtool/2.4.6/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Automake/1.16.1/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/share/aclocal:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/share/aclocal:1";
os.environ["ACLOCAL_PATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libtool/2.4.6/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/Automake/1.16.1/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/share/aclocal:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/share/aclocal";
os.environ["__LMOD_REF_COUNT_CPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libtool/2.4.6/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include:1\;/opt/ebsofts/Core/Eigen/3.3.7/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include/libxml2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:1\;/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:1\;/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:1\;/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:1\;/opt/ebsofts/Core/GCCcore/7.3.0/include:1";
os.environ["CPATH"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libtool/2.4.6/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include:/opt/ebsofts/Core/Eigen/3.3.7/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include/libxml2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/include/freetype2:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/include:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/include:/opt/ebsofts/Core/GCCcore/7.3.0/include";
os.environ["EBDEVELAUTOCONF"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/Autoconf/2.69/easybuild/Compiler-GCCcore-7.3.0-Autoconf-2.69-easybuild-devel";
os.environ["EBDEVELAUTOMAKE"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/Automake/1.16.1/easybuild/Compiler-GCCcore-7.3.0-Automake-1.16.1-easybuild-devel";
os.environ["EBDEVELAUTOTOOLS"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/Autotools/20180311/easybuild/Compiler-GCCcore-7.3.0-Autotools-20180311-easybuild-devel";
os.environ["EBDEVELLIBTOOL"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/libtool/2.4.6/easybuild/Compiler-GCCcore-7.3.0-libtool-2.4.6-easybuild-devel";
os.environ["EBDEVELM4"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/M4/1.4.18/easybuild/Compiler-GCCcore-7.3.0-M4-1.4.18-easybuild-devel";
os.environ["EBROOTAUTOCONF"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/Autoconf/2.69";
os.environ["EBROOTAUTOMAKE"] = "/opt/ebsofts/Compiler/GCCcore/7.3.0/Automake/1.16.1";
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os.environ["_ModuleTable023_"] = "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";
os.environ["_ModuleTable024_"] = "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";
os.environ["_ModuleTable025_"] = "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";
os.environ["_ModuleTable026_"] = "cHQvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmU6L29wdC9lYm1vZHVsZXMvYWxsL0NvcmUiLH0=";
os.environ["_ModuleTable_Sz_"] = "26";
; stderr: 
== 2019-06-03 11:59:34,731 modules.py:1204 DEBUG Output found in stdout, seems like '/opt/lmod/lmod/libexec/lmod python load Autotools/20180311' ran fine
== 2019-06-03 11:59:34,732 modules.py:769 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/opt/ebsofts/Compiler/GCCcore/7.3.0/libtool/2.4.6/lib'] to ['/opt/ebsofts/Compiler/GCCcore/7.3.0/libtool/2.4.6/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib', '/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib', '/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib', '/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib', '/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0', '/opt/ebsofts/Core/GCCcore/7.3.0/lib64', '/opt/ebsofts/Core/GCCcore/7.3.0/lib']
== 2019-06-03 11:59:34,733 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /opt/ebsofts/Compiler/GCCcore/7.3.0/libtool/2.4.6/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib (previous value: '/opt/ebsofts/Compiler/GCCcore/7.3.0/libtool/2.4.6/lib')
== 2019-06-03 11:59:34,733 modules.py:769 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2019-06-03 11:59:34,733 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2019-06-03 11:59:34,734 modules.py:715 DEBUG Current MODULEPATH: /opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core
== 2019-06-03 11:59:34,734 modules.py:722 DEBUG Changing LD_LIBRARY_PATH from '/opt/ebsofts/Compiler/GCCcore/7.3.0/libtool/2.4.6/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libjpeg-turbo/2.0.0/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/libGLU/9.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GLib/2.54.3/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/PCRE/8.41/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/gettext/0.19.8.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libxml2/2.9.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LLVM/6.0.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libdrm/2.4.92/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/X11/20180604/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/fontconfig/2.13.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/util-linux/2.32/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/freetype/2.9.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libpng/1.6.34/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/expat/2.2.5/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/nettle/3.4/lib64:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib/python2.7/site-packages/numpy-1.14.5-py2.7-linux-x86_64.egg/numpy/core/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib64:/opt/ebsofts/Compiler/GCCcore/7.3.0/libffi/3.2.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/GMP/6.1.2/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/SQLite/3.24.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/Tcl/8.6.8/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/libreadline/7.0/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/ncurses/6.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/bzip2/1.0.6/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib:/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib:/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/hwloc/1.11.10/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/numactl/2.0.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib:/opt/ebsofts/Compiler/GCCcore/7.3.0/binutils/2.30/lib:/opt/ebsofts/Core/GCCcore/7.3.0/lib/gcc/x86_64-pc-linux-gnu/7.3.0:/opt/ebsofts/Core/GCCcore/7.3.0/lib64:/opt/ebsofts/Core/GCCcore/7.3.0/lib' to '' in environment for module command
== 2019-06-03 11:59:34,734 modules.py:722 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2019-06-03 11:59:34,735 modules.py:726 DEBUG Running module command '/opt/lmod/lmod/libexec/lmod python show foss/2018b' from /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15
== 2019-06-03 11:59:35,673 modules.py:732 DEBUG Output of module command '/opt/lmod/lmod/libexec/lmod python show foss/2018b': stdout: os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all/Compiler/LLVM/6.0.0:1\;/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0:1\;/opt/ebmodules/all/Core:1\;/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core";
os.environ["_ModuleTable001_"] = "X01vZHVsZVRhYmxlXz17WyJNVHZlcnNpb24iXT0zLFsiY19yZWJ1aWxkVGltZSJdPTg2NDAwLFsiY19zaG9ydFRpbWUiXT1mYWxzZSxkZXB0aFQ9e30sZmFtaWx5PXt9LG1UPXtBdXRvY29uZj17WyJmbiJdPSIvb3B0L2VibW9kdWxlcy9hbGwvQ29tcGlsZXIvR0NDY29yZS83LjMuMC9BdXRvY29uZi8yLjY5Lmx1YSIsWyJmdWxsTmFtZSJdPSJBdXRvY29uZi8yLjY5IixbImxvYWRPcmRlciJdPTQzLHByb3BUPXt9LFsic3RhY2tEZXB0aCJdPTEsWyJzdGF0dXMiXT0iYWN0aXZlIixbInVzZXJOYW1lIl09IkF1dG9jb25mLzIuNjkiLH0sQXV0b21ha2U9e1siZm4iXT0iL29wdC9lYm1vZHVsZXMvYWxsL0NvbXBpbGVyL0dDQ2NvcmUvNy4zLjAvQXV0b21ha2UvMS4xNi4xLmx1YSIs";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "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";
os.environ["_ModuleTable005_"] = "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";
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os.environ["_ModuleTable024_"] = "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";
os.environ["_ModuleTable025_"] = "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";
os.environ["_ModuleTable026_"] = "cHQvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmU6L29wdC9lYm1vZHVsZXMvYWxsL0NvcmUiLH0=";
os.environ["_ModuleTable_Sz_"] = "26";
; stderr: --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
   /opt/ebmodules/all/Core/foss/2018b.lua:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
help([[
Description
===========
GNU Compiler Collection (GCC) based compiler toolchain, including
 OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.


More information
================
 - Homepage: (none)
]])
whatis("Description: GNU Compiler Collection (GCC) based compiler toolchain, including
 OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.")
whatis("Homepage: (none)")
conflict("foss")
setenv("EBROOTFOSS","/opt/ebsofts/Core/foss/2018b")
setenv("EBVERSIONFOSS","2018b")
setenv("EBDEVELFOSS","/opt/ebsofts/Core/foss/2018b/easybuild/Core-foss-2018b-easybuild-devel")


== 2019-06-03 11:59:35,674 modules.py:628 DEBUG Cached result for 'module show foss/2018b' with key '('MODULEPATH=/opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core', 'lmod', 'foss/2018b')': os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all/Compiler/LLVM/6.0.0:1\;/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0:1\;/opt/ebmodules/all/Core:1\;/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "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";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "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";
os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "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";
os.environ["_ModuleTable009_"] = "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";
os.environ["_ModuleTable010_"] = "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";
os.environ["_ModuleTable011_"] = "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";
os.environ["_ModuleTable012_"] = "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";
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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
   /opt/ebmodules/all/Core/foss/2018b.lua:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
help([[
Description
===========
GNU Compiler Collection (GCC) based compiler toolchain, including
 OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.


More information
================
 - Homepage: (none)
]])
whatis("Description: GNU Compiler Collection (GCC) based compiler toolchain, including
 OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.")
whatis("Homepage: (none)")
conflict("foss")
setenv("EBROOTFOSS","/opt/ebsofts/Core/foss/2018b")
setenv("EBVERSIONFOSS","2018b")
setenv("EBDEVELFOSS","/opt/ebsofts/Core/foss/2018b/easybuild/Core-foss-2018b-easybuild-devel")


== 2019-06-03 11:59:35,675 modules.py:562 DEBUG Result for existence check of foss/2018b module: True
== 2019-06-03 11:59:35,675 modules.py:624 DEBUG Found cached result for 'module show foss/2018b' with key '('MODULEPATH=/opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core', 'lmod', 'foss/2018b')': os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/opt/ebmodules/all/Compiler/LLVM/6.0.0:1\;/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:1\;/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:1\;/opt/ebmodules/all/Compiler/GCCcore/7.3.0:1\;/opt/ebmodules/all/Core:1\;/opt/ebmodules/all:1\;/opt/modulefiles/Linux:1\;/opt/lmod/lmod/modulefiles/Core:1";
os.environ["MODULEPATH"] = "/opt/ebmodules/all/Compiler/LLVM/6.0.0:/opt/ebmodules/all/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1:/opt/ebmodules/all/Compiler/GCC/7.3.0-2.30:/opt/ebmodules/all/Compiler/GCCcore/7.3.0:/opt/ebmodules/all/Core:/opt/ebmodules/all:/opt/modulefiles/Linux:/opt/lmod/lmod/modulefiles/Core";
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--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
   /opt/ebmodules/all/Core/foss/2018b.lua:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
help([[
Description
===========
GNU Compiler Collection (GCC) based compiler toolchain, including
 OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.


More information
================
 - Homepage: (none)
]])
whatis("Description: GNU Compiler Collection (GCC) based compiler toolchain, including
 OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.")
whatis("Homepage: (none)")
conflict("foss")
setenv("EBROOTFOSS","/opt/ebsofts/Core/foss/2018b")
setenv("EBVERSIONFOSS","2018b")
setenv("EBDEVELFOSS","/opt/ebsofts/Core/foss/2018b/easybuild/Core-foss-2018b-easybuild-devel")


== 2019-06-03 11:59:35,676 toolchain.py:631 DEBUG List of toolchain dependencies from toolchain module: ['GCC/7.3.0-2.30', 'OpenMPI/3.1.1', 'OpenBLAS/0.3.1', 'FFTW/3.3.8', 'ScaLAPACK/2.0.2-OpenBLAS-0.3.1']
== 2019-06-03 11:59:35,677 toolchain.py:449 DEBUG Toolchain definition for {'dummy': True, 'versionsuffix': '', 'version': '2018b', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'foss', 'full_mod_name': 'Core/foss/2018b', 'hidden': False, 'parsed': True, 'short_mod_name': 'foss/2018b'}: {'LAPACK': ['OpenBLAS'], 'SCALAPACK': ['ScaLAPACK'], 'BLAS': ['OpenBLAS'], 'FFT': ['FFTW'], 'BLACS': ['BLACS'], 'MPI': ['OpenMPI'], 'COMPILER': ['GCC']}
== 2019-06-03 11:59:35,677 toolchain.py:307 DEBUG get_software_version software version 2.0.2 for ScaLAPACK was found in environment
== 2019-06-03 11:59:35,678 mns.py:164 DEBUG Checking whether 'GCC/7.3.0-2.30' is a module name for software with name 'BLACS' via regex ^BLACS(/\S+)?$: False
== 2019-06-03 11:59:35,678 mns.py:164 DEBUG Checking whether 'OpenMPI/3.1.1' is a module name for software with name 'BLACS' via regex ^BLACS(/\S+)?$: False
== 2019-06-03 11:59:35,678 mns.py:164 DEBUG Checking whether 'OpenBLAS/0.3.1' is a module name for software with name 'BLACS' via regex ^BLACS(/\S+)?$: False
== 2019-06-03 11:59:35,678 mns.py:164 DEBUG Checking whether 'FFTW/3.3.8' is a module name for software with name 'BLACS' via regex ^BLACS(/\S+)?$: False
== 2019-06-03 11:59:35,678 mns.py:164 DEBUG Checking whether 'ScaLAPACK/2.0.2-OpenBLAS-0.3.1' is a module name for software with name 'BLACS' via regex ^BLACS(/\S+)?$: False
== 2019-06-03 11:59:35,678 toolchain.py:641 DEBUG Removing BLACS from list of optional toolchain elements.
== 2019-06-03 11:59:35,679 toolchain.py:644 DEBUG List of toolchain elements from toolchain definition: set(['GCC', 'FFTW', 'OpenMPI', 'ScaLAPACK', 'OpenBLAS'])
== 2019-06-03 11:59:35,679 mns.py:164 DEBUG Checking whether 'GCC/7.3.0-2.30' is a module name for software with name 'GCC' via regex ^GCC(/\S+)?$: True
== 2019-06-03 11:59:35,679 mns.py:164 DEBUG Checking whether 'OpenMPI/3.1.1' is a module name for software with name 'GCC' via regex ^GCC(/\S+)?$: False
== 2019-06-03 11:59:35,679 mns.py:164 DEBUG Checking whether 'OpenBLAS/0.3.1' is a module name for software with name 'GCC' via regex ^GCC(/\S+)?$: False
== 2019-06-03 11:59:35,679 mns.py:164 DEBUG Checking whether 'FFTW/3.3.8' is a module name for software with name 'GCC' via regex ^GCC(/\S+)?$: False
== 2019-06-03 11:59:35,680 mns.py:164 DEBUG Checking whether 'ScaLAPACK/2.0.2-OpenBLAS-0.3.1' is a module name for software with name 'GCC' via regex ^GCC(/\S+)?$: False
== 2019-06-03 11:59:35,680 mns.py:164 DEBUG Checking whether 'GCC/7.3.0-2.30' is a module name for software with name 'FFTW' via regex ^FFTW(/\S+)?$: False
== 2019-06-03 11:59:35,680 mns.py:164 DEBUG Checking whether 'OpenMPI/3.1.1' is a module name for software with name 'FFTW' via regex ^FFTW(/\S+)?$: False
== 2019-06-03 11:59:35,680 mns.py:164 DEBUG Checking whether 'OpenBLAS/0.3.1' is a module name for software with name 'FFTW' via regex ^FFTW(/\S+)?$: False
== 2019-06-03 11:59:35,680 mns.py:164 DEBUG Checking whether 'FFTW/3.3.8' is a module name for software with name 'FFTW' via regex ^FFTW(/\S+)?$: True
== 2019-06-03 11:59:35,681 mns.py:164 DEBUG Checking whether 'ScaLAPACK/2.0.2-OpenBLAS-0.3.1' is a module name for software with name 'FFTW' via regex ^FFTW(/\S+)?$: False
== 2019-06-03 11:59:35,681 mns.py:164 DEBUG Checking whether 'GCC/7.3.0-2.30' is a module name for software with name 'OpenMPI' via regex ^OpenMPI(/\S+)?$: False
== 2019-06-03 11:59:35,681 mns.py:164 DEBUG Checking whether 'OpenMPI/3.1.1' is a module name for software with name 'OpenMPI' via regex ^OpenMPI(/\S+)?$: True
== 2019-06-03 11:59:35,681 mns.py:164 DEBUG Checking whether 'OpenBLAS/0.3.1' is a module name for software with name 'OpenMPI' via regex ^OpenMPI(/\S+)?$: False
== 2019-06-03 11:59:35,681 mns.py:164 DEBUG Checking whether 'FFTW/3.3.8' is a module name for software with name 'OpenMPI' via regex ^OpenMPI(/\S+)?$: False
== 2019-06-03 11:59:35,682 mns.py:164 DEBUG Checking whether 'ScaLAPACK/2.0.2-OpenBLAS-0.3.1' is a module name for software with name 'OpenMPI' via regex ^OpenMPI(/\S+)?$: False
== 2019-06-03 11:59:35,682 mns.py:164 DEBUG Checking whether 'GCC/7.3.0-2.30' is a module name for software with name 'ScaLAPACK' via regex ^ScaLAPACK(/\S+)?$: False
== 2019-06-03 11:59:35,682 mns.py:164 DEBUG Checking whether 'OpenMPI/3.1.1' is a module name for software with name 'ScaLAPACK' via regex ^ScaLAPACK(/\S+)?$: False
== 2019-06-03 11:59:35,682 mns.py:164 DEBUG Checking whether 'OpenBLAS/0.3.1' is a module name for software with name 'ScaLAPACK' via regex ^ScaLAPACK(/\S+)?$: False
== 2019-06-03 11:59:35,682 mns.py:164 DEBUG Checking whether 'FFTW/3.3.8' is a module name for software with name 'ScaLAPACK' via regex ^ScaLAPACK(/\S+)?$: False
== 2019-06-03 11:59:35,683 mns.py:164 DEBUG Checking whether 'ScaLAPACK/2.0.2-OpenBLAS-0.3.1' is a module name for software with name 'ScaLAPACK' via regex ^ScaLAPACK(/\S+)?$: True
== 2019-06-03 11:59:35,683 mns.py:164 DEBUG Checking whether 'GCC/7.3.0-2.30' is a module name for software with name 'OpenBLAS' via regex ^OpenBLAS(/\S+)?$: False
== 2019-06-03 11:59:35,683 mns.py:164 DEBUG Checking whether 'OpenMPI/3.1.1' is a module name for software with name 'OpenBLAS' via regex ^OpenBLAS(/\S+)?$: False
== 2019-06-03 11:59:35,683 mns.py:164 DEBUG Checking whether 'OpenBLAS/0.3.1' is a module name for software with name 'OpenBLAS' via regex ^OpenBLAS(/\S+)?$: True
== 2019-06-03 11:59:35,683 mns.py:164 DEBUG Checking whether 'FFTW/3.3.8' is a module name for software with name 'OpenBLAS' via regex ^OpenBLAS(/\S+)?$: False
== 2019-06-03 11:59:35,684 mns.py:164 DEBUG Checking whether 'ScaLAPACK/2.0.2-OpenBLAS-0.3.1' is a module name for software with name 'OpenBLAS' via regex ^OpenBLAS(/\S+)?$: False
== 2019-06-03 11:59:35,684 toolchain.py:647 INFO List of toolchain dependency modules and toolchain definition match!
== 2019-06-03 11:59:35,685 options.py:90 WARNING option: option with name _opt_CC returns None
== 2019-06-03 11:59:35,686 options.py:90 WARNING option: option with name _opt_CXX returns None
== 2019-06-03 11:59:35,686 options.py:90 WARNING option: option with name _opt_F77 returns None
== 2019-06-03 11:59:35,686 options.py:90 WARNING option: option with name _opt_F90 returns None
== 2019-06-03 11:59:35,686 options.py:90 WARNING option: option with name _opt_FC returns None
== 2019-06-03 11:59:35,687 compiler.py:346 INFO _set_optimal_architecture: using march=core2 as optarch for x86_64.
== 2019-06-03 11:59:35,691 toolchain.py:307 DEBUG get_software_version software version 3.1.1 for OpenMPI was found in environment
== 2019-06-03 11:59:35,693 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1 for OpenMPI was found in environment
== 2019-06-03 11:59:35,723 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1 for OpenBLAS was found in environment
== 2019-06-03 11:59:35,724 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1 for OpenBLAS was found in environment
== 2019-06-03 11:59:35,724 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib64 was not found
== 2019-06-03 11:59:35,730 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1 for OpenBLAS was found in environment
== 2019-06-03 11:59:35,731 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib64 was not found
== 2019-06-03 11:59:35,731 toolchain.py:307 DEBUG get_software_version software version 2.0.2 for ScaLAPACK was found in environment
== 2019-06-03 11:59:35,736 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1 for ScaLAPACK was found in environment
== 2019-06-03 11:59:35,752 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1 for ScaLAPACK was found in environment
== 2019-06-03 11:59:35,753 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib64 was not found
== 2019-06-03 11:59:35,753 toolchain.py:307 DEBUG get_software_version software version 3.3.8 for FFTW was found in environment
== 2019-06-03 11:59:35,754 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8 for FFTW was found in environment
== 2019-06-03 11:59:35,763 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8 for FFTW was found in environment
== 2019-06-03 11:59:35,764 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib64 was not found
== 2019-06-03 11:59:35,765 toolchain.py:743 DEBUG prepare: set additional variables onlymod=False
== 2019-06-03 11:59:35,766 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9 for LibTIFF was found in environment
== 2019-06-03 11:59:35,766 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11 for zlib was found in environment
== 2019-06-03 11:59:35,766 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15 for Python was found in environment
== 2019-06-03 11:59:35,766 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1 for Mesa was found in environment
== 2019-06-03 11:59:35,766 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7 for Qt was found in environment
== 2019-06-03 11:59:35,767 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4 for XZ was found in environment
== 2019-06-03 11:59:35,767 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/Core/Eigen/3.3.7 for Eigen was found in environment
== 2019-06-03 11:59:35,767 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4 for XZ was found in environment
== 2019-06-03 11:59:35,767 toolchain.py:298 DEBUG get_software_root software root /opt/ebsofts/Compiler/GCCcore/7.3.0/Autotools/20180311 for Autotools was found in environment
== 2019-06-03 11:59:35,768 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib64 was not found
== 2019-06-03 11:59:35,768 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib64 was not found
== 2019-06-03 11:59:35,769 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib64 was not found
== 2019-06-03 11:59:35,780 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib64 was not found
== 2019-06-03 11:59:35,781 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib64 was not found
== 2019-06-03 11:59:35,787 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib64 was not found
== 2019-06-03 11:59:35,804 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Core/Eigen/3.3.7/lib64 was not found
== 2019-06-03 11:59:35,804 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Core/Eigen/3.3.7/lib was not found
== 2019-06-03 11:59:35,805 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib64 was not found
== 2019-06-03 11:59:35,809 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Compiler/GCCcore/7.3.0/Autotools/20180311/include was not found
== 2019-06-03 11:59:35,810 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Compiler/GCCcore/7.3.0/Autotools/20180311/lib64 was not found
== 2019-06-03 11:59:35,810 variables.py:201 WARNING flags_for_subdirs: directory /opt/ebsofts/Compiler/GCCcore/7.3.0/Autotools/20180311/lib was not found
== 2019-06-03 11:59:35,816 toolchain.py:962 DEBUG _setenv_variables: setting environment variable BLAS_INC_DIR to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include
== 2019-06-03 11:59:35,816 environment.py:97 INFO Environment variable BLAS_INC_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include (previously undefined)
== 2019-06-03 11:59:35,816 environment.py:97 INFO Environment variable EBVARBLAS_INC_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include (previously undefined)
== 2019-06-03 11:59:35,817 toolchain.py:962 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_INC_DIR to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include
== 2019-06-03 11:59:35,817 environment.py:97 INFO Environment variable BLAS_LAPACK_INC_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include (previously undefined)
== 2019-06-03 11:59:35,817 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_INC_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include (previously undefined)
== 2019-06-03 11:59:35,817 toolchain.py:962 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_LIB_DIR to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib
== 2019-06-03 11:59:35,817 environment.py:97 INFO Environment variable BLAS_LAPACK_LIB_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib (previously undefined)
== 2019-06-03 11:59:35,818 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_LIB_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib (previously undefined)
== 2019-06-03 11:59:35,818 toolchain.py:962 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_MT_STATIC_LIBS to libopenblas.a,libgfortran.a
== 2019-06-03 11:59:35,818 environment.py:97 INFO Environment variable BLAS_LAPACK_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,818 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,818 toolchain.py:962 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_STATIC_LIBS to libopenblas.a,libgfortran.a
== 2019-06-03 11:59:35,818 environment.py:97 INFO Environment variable BLAS_LAPACK_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,819 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,819 toolchain.py:962 DEBUG _setenv_variables: setting environment variable BLAS_LIB_DIR to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib
== 2019-06-03 11:59:35,819 environment.py:97 INFO Environment variable BLAS_LIB_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib (previously undefined)
== 2019-06-03 11:59:35,819 environment.py:97 INFO Environment variable EBVARBLAS_LIB_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib (previously undefined)
== 2019-06-03 11:59:35,819 toolchain.py:962 DEBUG _setenv_variables: setting environment variable BLAS_MT_STATIC_LIBS to libopenblas.a,libgfortran.a
== 2019-06-03 11:59:35,820 environment.py:97 INFO Environment variable BLAS_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,820 environment.py:97 INFO Environment variable EBVARBLAS_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,820 toolchain.py:962 DEBUG _setenv_variables: setting environment variable BLAS_STATIC_LIBS to libopenblas.a,libgfortran.a
== 2019-06-03 11:59:35,820 environment.py:97 INFO Environment variable BLAS_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,820 environment.py:97 INFO Environment variable EBVARBLAS_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,820 toolchain.py:962 DEBUG _setenv_variables: setting environment variable CC to gcc
== 2019-06-03 11:59:35,821 environment.py:97 INFO Environment variable CC set to gcc (previously undefined)
== 2019-06-03 11:59:35,821 environment.py:97 INFO Environment variable EBVARCC set to gcc (previously undefined)
== 2019-06-03 11:59:35,821 toolchain.py:962 DEBUG _setenv_variables: setting environment variable CFLAGS to -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11
== 2019-06-03 11:59:35,821 environment.py:97 INFO Environment variable CFLAGS set to -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 (previously undefined)
== 2019-06-03 11:59:35,821 environment.py:97 INFO Environment variable EBVARCFLAGS set to -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 (previously undefined)
== 2019-06-03 11:59:35,822 toolchain.py:962 DEBUG _setenv_variables: setting environment variable CPPFLAGS to -I/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -I/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -I/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -I/opt/ebsofts/Core/Eigen/3.3.7/include -I/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include
== 2019-06-03 11:59:35,822 environment.py:97 INFO Environment variable CPPFLAGS set to -I/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -I/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -I/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -I/opt/ebsofts/Core/Eigen/3.3.7/include -I/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include (previously undefined)
== 2019-06-03 11:59:35,822 environment.py:97 INFO Environment variable EBVARCPPFLAGS set to -I/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -I/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -I/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/include -I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -I/opt/ebsofts/Core/Eigen/3.3.7/include -I/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/include (previously undefined)
== 2019-06-03 11:59:35,822 toolchain.py:962 DEBUG _setenv_variables: setting environment variable CXX to g++
== 2019-06-03 11:59:35,822 environment.py:97 INFO Environment variable CXX set to g++ (previously undefined)
== 2019-06-03 11:59:35,823 environment.py:97 INFO Environment variable EBVARCXX set to g++ (previously undefined)
== 2019-06-03 11:59:35,823 toolchain.py:962 DEBUG _setenv_variables: setting environment variable CXXFLAGS to -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11
== 2019-06-03 11:59:35,823 environment.py:97 INFO Environment variable CXXFLAGS set to -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 (previously undefined)
== 2019-06-03 11:59:35,823 environment.py:97 INFO Environment variable EBVARCXXFLAGS set to -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 (previously undefined)
== 2019-06-03 11:59:35,823 toolchain.py:962 DEBUG _setenv_variables: setting environment variable F77 to gfortran
== 2019-06-03 11:59:35,824 environment.py:97 INFO Environment variable F77 set to gfortran (previously undefined)
== 2019-06-03 11:59:35,824 environment.py:97 INFO Environment variable EBVARF77 set to gfortran (previously undefined)
== 2019-06-03 11:59:35,824 toolchain.py:962 DEBUG _setenv_variables: setting environment variable F90 to gfortran
== 2019-06-03 11:59:35,824 environment.py:97 INFO Environment variable F90 set to gfortran (previously undefined)
== 2019-06-03 11:59:35,824 environment.py:97 INFO Environment variable EBVARF90 set to gfortran (previously undefined)
== 2019-06-03 11:59:35,824 toolchain.py:962 DEBUG _setenv_variables: setting environment variable F90FLAGS to -O2 -ftree-vectorize -march=core2 -fno-math-errno
== 2019-06-03 11:59:35,825 environment.py:97 INFO Environment variable F90FLAGS set to -O2 -ftree-vectorize -march=core2 -fno-math-errno (previously undefined)
== 2019-06-03 11:59:35,825 environment.py:97 INFO Environment variable EBVARF90FLAGS set to -O2 -ftree-vectorize -march=core2 -fno-math-errno (previously undefined)
== 2019-06-03 11:59:35,825 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FC to gfortran
== 2019-06-03 11:59:35,825 environment.py:97 INFO Environment variable FC set to gfortran (previously undefined)
== 2019-06-03 11:59:35,825 environment.py:97 INFO Environment variable EBVARFC set to gfortran (previously undefined)
== 2019-06-03 11:59:35,825 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FCFLAGS to -O2 -ftree-vectorize -march=core2 -fno-math-errno
== 2019-06-03 11:59:35,826 environment.py:97 INFO Environment variable FCFLAGS set to -O2 -ftree-vectorize -march=core2 -fno-math-errno (previously undefined)
== 2019-06-03 11:59:35,826 environment.py:97 INFO Environment variable EBVARFCFLAGS set to -O2 -ftree-vectorize -march=core2 -fno-math-errno (previously undefined)
== 2019-06-03 11:59:35,826 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FFLAGS to -O2 -ftree-vectorize -march=core2 -fno-math-errno
== 2019-06-03 11:59:35,826 environment.py:97 INFO Environment variable FFLAGS set to -O2 -ftree-vectorize -march=core2 -fno-math-errno (previously undefined)
== 2019-06-03 11:59:35,826 environment.py:97 INFO Environment variable EBVARFFLAGS set to -O2 -ftree-vectorize -march=core2 -fno-math-errno (previously undefined)
== 2019-06-03 11:59:35,826 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FFTW_INC_DIR to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include
== 2019-06-03 11:59:35,827 environment.py:97 INFO Environment variable FFTW_INC_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include (previously undefined)
== 2019-06-03 11:59:35,827 environment.py:97 INFO Environment variable EBVARFFTW_INC_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include (previously undefined)
== 2019-06-03 11:59:35,827 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FFTW_LIB_DIR to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib
== 2019-06-03 11:59:35,827 environment.py:97 INFO Environment variable FFTW_LIB_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib (previously undefined)
== 2019-06-03 11:59:35,827 environment.py:97 INFO Environment variable EBVARFFTW_LIB_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib (previously undefined)
== 2019-06-03 11:59:35,828 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FFTW_STATIC_LIBS to libfftw3.a
== 2019-06-03 11:59:35,828 environment.py:97 INFO Environment variable FFTW_STATIC_LIBS set to libfftw3.a (previously undefined)
== 2019-06-03 11:59:35,828 environment.py:97 INFO Environment variable EBVARFFTW_STATIC_LIBS set to libfftw3.a (previously undefined)
== 2019-06-03 11:59:35,828 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FFTW_STATIC_LIBS_MT to libfftw3.a,libpthread.a
== 2019-06-03 11:59:35,828 environment.py:97 INFO Environment variable FFTW_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previously undefined)
== 2019-06-03 11:59:35,828 environment.py:97 INFO Environment variable EBVARFFTW_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previously undefined)
== 2019-06-03 11:59:35,829 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FFT_INC_DIR to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include
== 2019-06-03 11:59:35,829 environment.py:97 INFO Environment variable FFT_INC_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include (previously undefined)
== 2019-06-03 11:59:35,829 environment.py:97 INFO Environment variable EBVARFFT_INC_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include (previously undefined)
== 2019-06-03 11:59:35,829 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FFT_LIB_DIR to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib
== 2019-06-03 11:59:35,829 environment.py:97 INFO Environment variable FFT_LIB_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib (previously undefined)
== 2019-06-03 11:59:35,829 environment.py:97 INFO Environment variable EBVARFFT_LIB_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib (previously undefined)
== 2019-06-03 11:59:35,830 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FFT_STATIC_LIBS to libfftw3.a
== 2019-06-03 11:59:35,830 environment.py:97 INFO Environment variable FFT_STATIC_LIBS set to libfftw3.a (previously undefined)
== 2019-06-03 11:59:35,830 environment.py:97 INFO Environment variable EBVARFFT_STATIC_LIBS set to libfftw3.a (previously undefined)
== 2019-06-03 11:59:35,830 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FFT_STATIC_LIBS_MT to libfftw3.a,libpthread.a
== 2019-06-03 11:59:35,830 environment.py:97 INFO Environment variable FFT_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previously undefined)
== 2019-06-03 11:59:35,831 environment.py:97 INFO Environment variable EBVARFFT_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previously undefined)
== 2019-06-03 11:59:35,831 toolchain.py:962 DEBUG _setenv_variables: setting environment variable FLIBS to -lgfortran
== 2019-06-03 11:59:35,831 environment.py:97 INFO Environment variable FLIBS set to -lgfortran (previously undefined)
== 2019-06-03 11:59:35,831 environment.py:97 INFO Environment variable EBVARFLIBS set to -lgfortran (previously undefined)
== 2019-06-03 11:59:35,831 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LAPACK_INC_DIR to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include
== 2019-06-03 11:59:35,832 environment.py:97 INFO Environment variable LAPACK_INC_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include (previously undefined)
== 2019-06-03 11:59:35,832 environment.py:97 INFO Environment variable EBVARLAPACK_INC_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/include (previously undefined)
== 2019-06-03 11:59:35,832 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LAPACK_LIB_DIR to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib
== 2019-06-03 11:59:35,832 environment.py:97 INFO Environment variable LAPACK_LIB_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib (previously undefined)
== 2019-06-03 11:59:35,832 environment.py:97 INFO Environment variable EBVARLAPACK_LIB_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib (previously undefined)
== 2019-06-03 11:59:35,833 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LAPACK_MT_STATIC_LIBS to libopenblas.a,libgfortran.a
== 2019-06-03 11:59:35,833 environment.py:97 INFO Environment variable LAPACK_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,833 environment.py:97 INFO Environment variable EBVARLAPACK_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,833 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LAPACK_STATIC_LIBS to libopenblas.a,libgfortran.a
== 2019-06-03 11:59:35,833 environment.py:97 INFO Environment variable LAPACK_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,833 environment.py:97 INFO Environment variable EBVARLAPACK_STATIC_LIBS set to libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,834 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LDFLAGS to -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib
== 2019-06-03 11:59:35,834 environment.py:97 INFO Environment variable LDFLAGS set to -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib (previously undefined)
== 2019-06-03 11:59:35,834 environment.py:97 INFO Environment variable EBVARLDFLAGS set to -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib (previously undefined)
== 2019-06-03 11:59:35,834 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBBLAS to -lopenblas -lgfortran
== 2019-06-03 11:59:35,834 environment.py:97 INFO Environment variable LIBBLAS set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,835 environment.py:97 INFO Environment variable EBVARLIBBLAS set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,835 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBBLAS_MT to -lopenblas -lgfortran
== 2019-06-03 11:59:35,835 environment.py:97 INFO Environment variable LIBBLAS_MT set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,835 environment.py:97 INFO Environment variable EBVARLIBBLAS_MT set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,835 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBFFT to -lfftw3
== 2019-06-03 11:59:35,835 environment.py:97 INFO Environment variable LIBFFT set to -lfftw3 (previously undefined)
== 2019-06-03 11:59:35,836 environment.py:97 INFO Environment variable EBVARLIBFFT set to -lfftw3 (previously undefined)
== 2019-06-03 11:59:35,836 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBFFT_MT to -lfftw3 -lpthread
== 2019-06-03 11:59:35,836 environment.py:97 INFO Environment variable LIBFFT_MT set to -lfftw3 -lpthread (previously undefined)
== 2019-06-03 11:59:35,836 environment.py:97 INFO Environment variable EBVARLIBFFT_MT set to -lfftw3 -lpthread (previously undefined)
== 2019-06-03 11:59:35,836 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBLAPACK to -lopenblas -lgfortran
== 2019-06-03 11:59:35,836 environment.py:97 INFO Environment variable LIBLAPACK set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,837 environment.py:97 INFO Environment variable EBVARLIBLAPACK set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,837 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBLAPACK_MT to -lopenblas -lgfortran
== 2019-06-03 11:59:35,837 environment.py:97 INFO Environment variable LIBLAPACK_MT set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,837 environment.py:97 INFO Environment variable EBVARLIBLAPACK_MT set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,837 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBLAPACK_MT_ONLY to -lopenblas -lgfortran
== 2019-06-03 11:59:35,838 environment.py:97 INFO Environment variable LIBLAPACK_MT_ONLY set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,838 environment.py:97 INFO Environment variable EBVARLIBLAPACK_MT_ONLY set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,838 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBLAPACK_ONLY to -lopenblas -lgfortran
== 2019-06-03 11:59:35,838 environment.py:97 INFO Environment variable LIBLAPACK_ONLY set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,838 environment.py:97 INFO Environment variable EBVARLIBLAPACK_ONLY set to -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,839 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBS to -lm -lpthread
== 2019-06-03 11:59:35,839 environment.py:97 INFO Environment variable LIBS set to -lm -lpthread (previously undefined)
== 2019-06-03 11:59:35,839 environment.py:97 INFO Environment variable EBVARLIBS set to -lm -lpthread (previously undefined)
== 2019-06-03 11:59:35,839 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK to -lscalapack -lopenblas -lgfortran
== 2019-06-03 11:59:35,839 environment.py:97 INFO Environment variable LIBSCALAPACK set to -lscalapack -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,839 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK set to -lscalapack -lopenblas -lgfortran (previously undefined)
== 2019-06-03 11:59:35,840 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_MT to -lscalapack -lopenblas -lpthread -lgfortran
== 2019-06-03 11:59:35,840 environment.py:97 INFO Environment variable LIBSCALAPACK_MT set to -lscalapack -lopenblas -lpthread -lgfortran (previously undefined)
== 2019-06-03 11:59:35,840 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK_MT set to -lscalapack -lopenblas -lpthread -lgfortran (previously undefined)
== 2019-06-03 11:59:35,840 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_MT_ONLY to -lscalapack -lgfortran
== 2019-06-03 11:59:35,840 environment.py:97 INFO Environment variable LIBSCALAPACK_MT_ONLY set to -lscalapack -lgfortran (previously undefined)
== 2019-06-03 11:59:35,840 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK_MT_ONLY set to -lscalapack -lgfortran (previously undefined)
== 2019-06-03 11:59:35,841 toolchain.py:962 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_ONLY to -lscalapack -lgfortran
== 2019-06-03 11:59:35,841 environment.py:97 INFO Environment variable LIBSCALAPACK_ONLY set to -lscalapack -lgfortran (previously undefined)
== 2019-06-03 11:59:35,841 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK_ONLY set to -lscalapack -lgfortran (previously undefined)
== 2019-06-03 11:59:35,841 toolchain.py:962 DEBUG _setenv_variables: setting environment variable MPICC to mpicc
== 2019-06-03 11:59:35,841 environment.py:97 INFO Environment variable MPICC set to mpicc (previously undefined)
== 2019-06-03 11:59:35,842 environment.py:97 INFO Environment variable EBVARMPICC set to mpicc (previously undefined)
== 2019-06-03 11:59:35,842 toolchain.py:962 DEBUG _setenv_variables: setting environment variable MPICXX to mpicxx
== 2019-06-03 11:59:35,842 environment.py:97 INFO Environment variable MPICXX set to mpicxx (previously undefined)
== 2019-06-03 11:59:35,842 environment.py:97 INFO Environment variable EBVARMPICXX set to mpicxx (previously undefined)
== 2019-06-03 11:59:35,842 toolchain.py:962 DEBUG _setenv_variables: setting environment variable MPIF77 to mpifort
== 2019-06-03 11:59:35,842 environment.py:97 INFO Environment variable MPIF77 set to mpifort (previously undefined)
== 2019-06-03 11:59:35,843 environment.py:97 INFO Environment variable EBVARMPIF77 set to mpifort (previously undefined)
== 2019-06-03 11:59:35,843 toolchain.py:962 DEBUG _setenv_variables: setting environment variable MPIF90 to mpifort
== 2019-06-03 11:59:35,843 environment.py:97 INFO Environment variable MPIF90 set to mpifort (previously undefined)
== 2019-06-03 11:59:35,843 environment.py:97 INFO Environment variable EBVARMPIF90 set to mpifort (previously undefined)
== 2019-06-03 11:59:35,843 toolchain.py:962 DEBUG _setenv_variables: setting environment variable MPIFC to mpifort
== 2019-06-03 11:59:35,843 environment.py:97 INFO Environment variable MPIFC set to mpifort (previously undefined)
== 2019-06-03 11:59:35,844 environment.py:97 INFO Environment variable EBVARMPIFC set to mpifort (previously undefined)
== 2019-06-03 11:59:35,844 toolchain.py:962 DEBUG _setenv_variables: setting environment variable MPI_INC_DIR to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include
== 2019-06-03 11:59:35,844 environment.py:97 INFO Environment variable MPI_INC_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include (previously undefined)
== 2019-06-03 11:59:35,844 environment.py:97 INFO Environment variable EBVARMPI_INC_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/include (previously undefined)
== 2019-06-03 11:59:35,844 toolchain.py:962 DEBUG _setenv_variables: setting environment variable MPI_LIB_DIR to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib
== 2019-06-03 11:59:35,845 environment.py:97 INFO Environment variable MPI_LIB_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib (previously undefined)
== 2019-06-03 11:59:35,845 environment.py:97 INFO Environment variable EBVARMPI_LIB_DIR set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib (previously undefined)
== 2019-06-03 11:59:35,845 toolchain.py:962 DEBUG _setenv_variables: setting environment variable MPI_LIB_SHARED to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib/libmpi.so
== 2019-06-03 11:59:35,845 environment.py:97 INFO Environment variable MPI_LIB_SHARED set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib/libmpi.so (previously undefined)
== 2019-06-03 11:59:35,845 environment.py:97 INFO Environment variable EBVARMPI_LIB_SHARED set to /opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenMPI/3.1.1/lib/libmpi.so (previously undefined)
== 2019-06-03 11:59:35,845 toolchain.py:962 DEBUG _setenv_variables: setting environment variable MPI_LIB_STATIC to 
== 2019-06-03 11:59:35,846 environment.py:97 INFO Environment variable MPI_LIB_STATIC set to  (previously undefined)
== 2019-06-03 11:59:35,846 environment.py:97 INFO Environment variable EBVARMPI_LIB_STATIC set to  (previously undefined)
== 2019-06-03 11:59:35,846 toolchain.py:962 DEBUG _setenv_variables: setting environment variable OMPI_CC to gcc
== 2019-06-03 11:59:35,846 environment.py:97 INFO Environment variable OMPI_CC set to gcc (previously undefined)
== 2019-06-03 11:59:35,846 environment.py:97 INFO Environment variable EBVAROMPI_CC set to gcc (previously undefined)
== 2019-06-03 11:59:35,847 toolchain.py:962 DEBUG _setenv_variables: setting environment variable OMPI_CXX to g++
== 2019-06-03 11:59:35,847 environment.py:97 INFO Environment variable OMPI_CXX set to g++ (previously undefined)
== 2019-06-03 11:59:35,847 environment.py:97 INFO Environment variable EBVAROMPI_CXX set to g++ (previously undefined)
== 2019-06-03 11:59:35,847 toolchain.py:962 DEBUG _setenv_variables: setting environment variable OMPI_F77 to gfortran
== 2019-06-03 11:59:35,847 environment.py:97 INFO Environment variable OMPI_F77 set to gfortran (previously undefined)
== 2019-06-03 11:59:35,848 environment.py:97 INFO Environment variable EBVAROMPI_F77 set to gfortran (previously undefined)
== 2019-06-03 11:59:35,848 toolchain.py:962 DEBUG _setenv_variables: setting environment variable OMPI_F90 to gfortran
== 2019-06-03 11:59:35,848 environment.py:97 INFO Environment variable OMPI_F90 set to gfortran (previously undefined)
== 2019-06-03 11:59:35,848 environment.py:97 INFO Environment variable EBVAROMPI_F90 set to gfortran (previously undefined)
== 2019-06-03 11:59:35,848 toolchain.py:962 DEBUG _setenv_variables: setting environment variable OMPI_FC to gfortran
== 2019-06-03 11:59:35,849 environment.py:97 INFO Environment variable OMPI_FC set to gfortran (previously undefined)
== 2019-06-03 11:59:35,849 environment.py:97 INFO Environment variable EBVAROMPI_FC set to gfortran (previously undefined)
== 2019-06-03 11:59:35,849 toolchain.py:962 DEBUG _setenv_variables: setting environment variable OPTFLAGS to -O2 -ftree-vectorize -march=core2
== 2019-06-03 11:59:35,849 environment.py:97 INFO Environment variable OPTFLAGS set to -O2 -ftree-vectorize -march=core2 (previously undefined)
== 2019-06-03 11:59:35,849 environment.py:97 INFO Environment variable EBVAROPTFLAGS set to -O2 -ftree-vectorize -march=core2 (previously undefined)
== 2019-06-03 11:59:35,849 toolchain.py:962 DEBUG _setenv_variables: setting environment variable PRECFLAGS to -fno-math-errno
== 2019-06-03 11:59:35,850 environment.py:97 INFO Environment variable PRECFLAGS set to -fno-math-errno (previously undefined)
== 2019-06-03 11:59:35,850 environment.py:97 INFO Environment variable EBVARPRECFLAGS set to -fno-math-errno (previously undefined)
== 2019-06-03 11:59:35,850 toolchain.py:962 DEBUG _setenv_variables: setting environment variable SCALAPACK_INC_DIR to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include
== 2019-06-03 11:59:35,850 environment.py:97 INFO Environment variable SCALAPACK_INC_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include (previously undefined)
== 2019-06-03 11:59:35,850 environment.py:97 INFO Environment variable EBVARSCALAPACK_INC_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/include (previously undefined)
== 2019-06-03 11:59:35,850 toolchain.py:962 DEBUG _setenv_variables: setting environment variable SCALAPACK_LIB_DIR to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib
== 2019-06-03 11:59:35,851 environment.py:97 INFO Environment variable SCALAPACK_LIB_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib (previously undefined)
== 2019-06-03 11:59:35,851 environment.py:97 INFO Environment variable EBVARSCALAPACK_LIB_DIR set to /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib (previously undefined)
== 2019-06-03 11:59:35,851 toolchain.py:962 DEBUG _setenv_variables: setting environment variable SCALAPACK_MT_STATIC_LIBS to libscalapack.a,libopenblas.a,libgfortran.a,libpthread.a
== 2019-06-03 11:59:35,851 environment.py:97 INFO Environment variable SCALAPACK_MT_STATIC_LIBS set to libscalapack.a,libopenblas.a,libgfortran.a,libpthread.a (previously undefined)
== 2019-06-03 11:59:35,851 environment.py:97 INFO Environment variable EBVARSCALAPACK_MT_STATIC_LIBS set to libscalapack.a,libopenblas.a,libgfortran.a,libpthread.a (previously undefined)
== 2019-06-03 11:59:35,852 toolchain.py:962 DEBUG _setenv_variables: setting environment variable SCALAPACK_STATIC_LIBS to libscalapack.a,libopenblas.a,libgfortran.a
== 2019-06-03 11:59:35,852 environment.py:97 INFO Environment variable SCALAPACK_STATIC_LIBS set to libscalapack.a,libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,852 environment.py:97 INFO Environment variable EBVARSCALAPACK_STATIC_LIBS set to libscalapack.a,libopenblas.a,libgfortran.a (previously undefined)
== 2019-06-03 11:59:35,852 toolchain.py:307 DEBUG get_software_version software version 3.1.1 for OpenMPI was found in environment
== 2019-06-03 11:59:35,853 easyblock.py:1515 INFO Using /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15/ as start dir
== 2019-06-03 11:59:35,853 easyblock.py:1518 DEBUG Changed to real build directory /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15/ (start_dir)
== 2019-06-03 11:59:35,853 easyblock.py:2752 DEBUG Not skipping configure step (skippable: True, skip: None, skipsteps: [], module_only: False, force: True
== 2019-06-03 11:59:35,853 build_log.py:252 INFO configuring...
== 2019-06-03 11:59:35,853 easyblock.py:2760 INFO Starting configure step
== 2019-06-03 11:59:35,854 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:35,854 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:35,854 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:35,854 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:35,854 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:35,855 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:35,855 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:35,855 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:35,855 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:35,855 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:35,856 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:35,856 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:35,856 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:35,856 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:35,856 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:35,857 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:35,857 easyblock.py:2766 INFO Running method configure_step part of step configure
== 2019-06-03 11:59:35,857 environment.py:97 INFO Environment variable QMAKE_CXX set to g++ (previously undefined)
== 2019-06-03 11:59:35,857 run.py:173 DEBUG run_cmd: running cmd python configure -verbose (in /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15)
== 2019-06-03 11:59:35,858 run.py:192 INFO running cmd: python configure -verbose 
== 2019-06-03 11:59:50,965 run.py:506 INFO cmd "python configure -verbose" exited with exit code 0 and output:

MRtrix build type requested: release version

Detecting OS: linux
Looking for compiler [g++]: EXEC <<
CMD: g++ --version
EXIT: 0
STDOUT:
g++ (GCC) 7.3.0
Copyright (C) 2017 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
>>

g++ (GCC) 7.3.0
Checking for C++11 compliance: 
COMPILE /tmp/eb-suH7ol/tmpZbwM3O.cpp:
---

#include <cstddef>
struct Base {
    Base (int);
};
struct Derived : Base {
    using Base::Base;
};

int main() {
  Derived D (int); // check for contructor inheritance
  return 0;
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 /tmp/eb-suH7ol/tmpZbwM3O.cpp -o /tmp/eb-suH7ol/tmpZbwM3O.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmpZbwM3O.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
>>

ok
Checking shared library generation: EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 /tmp/eb-suH7ol/tmpxfvdgr.cpp -o /tmp/eb-suH7ol/tmpxfvdgr.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmpxfvdgr.o -shared -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -o libtest.so
EXIT: 0
>>

ok
Detecting pointer size: 
COMPILE /tmp/eb-suH7ol/tmp0menW1.cpp:
---

#include <iostream>
int main() {
  std::cout << sizeof(void*);
  return (0);
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 /tmp/eb-suH7ol/tmp0menW1.cpp -o /tmp/eb-suH7ol/tmp0menW1.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmp0menW1.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
STDOUT:
8
>>

64 bit
Detecting byte order: little-endian
Checking for variable-length array support: 
COMPILE /tmp/eb-suH7ol/tmpVEjETc.cpp:
---

int main(int argc, char* argv[]) {
  int x[argc];
  return 0;
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 /tmp/eb-suH7ol/tmpVEjETc.cpp -o /tmp/eb-suH7ol/tmpVEjETc.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmpVEjETc.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
>>

ok
Checking for non-POD variable-length array support: 
COMPILE /tmp/eb-suH7ol/tmp47j42S.cpp:
---

#include <string>

class X {
  int x;
  double y;
  std::string s;
};

int main(int argc, char* argv[]) {
  X x[argc];
  return 0;
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 /tmp/eb-suH7ol/tmp47j42S.cpp -o /tmp/eb-suH7ol/tmp47j42S.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmp47j42S.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
>>

ok
Checking for ::max_align_t: 
COMPILE /tmp/eb-suH7ol/tmpIOGtVb.cpp:
---

#include <iostream>
#include <cstddef>
using ::max_align_t;
int main() {
  std::cout << alignof (max_align_t) << " bytes\n";
  return 0;
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 /tmp/eb-suH7ol/tmpIOGtVb.cpp -o /tmp/eb-suH7ol/tmpIOGtVb.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmpIOGtVb.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
STDOUT:
16 bytes
>>

16 bytes
Checking for std::max_align_t: 
COMPILE /tmp/eb-suH7ol/tmpzj37ok.cpp:
---

#include <iostream>
#include <cstddef>
using std::max_align_t;
int main() {
  std::cout << alignof (max_align_t) << " bytes\n";
  return 0;
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 /tmp/eb-suH7ol/tmpzj37ok.cpp -o /tmp/eb-suH7ol/tmpzj37ok.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmpzj37ok.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
STDOUT:
16 bytes
>>

16 bytes
EXEC <<
CMD: pkg-config --cflags eigen3
EXIT: 0
STDOUT:
-I/opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include
>>

Checking for Eigen3 library: 
COMPILE /tmp/eb-suH7ol/tmprzp3a8.cpp:
---

#include <cstddef>
#include <Eigen/Core>
#include <iostream>

int main (int argc, char* argv[]) {
  std::cout << EIGEN_WORLD_VERSION << "." << EIGEN_MAJOR_VERSION << "." << EIGEN_MINOR_VERSION << "\n";
  return 0;
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include /tmp/eb-suH7ol/tmprzp3a8.cpp -o /tmp/eb-suH7ol/tmprzp3a8.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmprzp3a8.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
STDOUT:
3.3.7
>>

3.3.7
EXEC <<
CMD: pkg-config --cflags zlib
EXIT: 0
STDOUT:
-I/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include
>>

EXEC <<
CMD: pkg-config --libs zlib
EXIT: 0
STDOUT:
-L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -lz
>>

Checking for zlib compression library: 
COMPILE /tmp/eb-suH7ol/tmpP93xrf.cpp:
---

#include <iostream>
#include <zlib.h>

int main() {
  std::cout << zlibVersion();
  return (0);
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include /tmp/eb-suH7ol/tmpP93xrf.cpp -o /tmp/eb-suH7ol/tmpP93xrf.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmpP93xrf.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -lz -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
STDOUT:
1.2.11
>>

1.2.11
Checking for "JSON for Modern C++" requirements: 
COMPILE /tmp/eb-suH7ol/tmp8i3sx9.cpp:
---

#include "file/json.h"
int main (int argc, char* argv[])
{
  nlohmann::json json;
  json["key"] = "value";
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -I/dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15/core /tmp/eb-suH7ol/tmp8i3sx9.cpp -o /tmp/eb-suH7ol/tmp8i3sx9.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmp8i3sx9.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -lz -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
>>

ok
EXEC <<
CMD: pkg-config --cflags libtiff-4
EXIT: 0
STDOUT:
-I/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include
>>

EXEC <<
CMD: pkg-config --libs libtiff-4
EXIT: 0
STDOUT:
-L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -ltiff
>>

Checking for TIFF library: 
COMPILE /tmp/eb-suH7ol/tmp9AFJyd.cpp:
---

#include <iostream>
#include <tiffio.h>

int main() {
  std::cout << TIFFGetVersion();
  return (0);
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include /tmp/eb-suH7ol/tmp9AFJyd.cpp -o /tmp/eb-suH7ol/tmp9AFJyd.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmp9AFJyd.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -lz -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -ltiff -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
STDOUT:
LIBTIFF, Version 4.0.9
Copyright (c) 1988-1996 Sam Leffler
Copyright (c) 1991-1996 Silicon Graphics, Inc.
>>

LIBTIFF, Version 4.0.9
EXEC <<
CMD: pkg-config --cflags fftw3
EXIT: 0
STDOUT:
-I/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include
>>

EXEC <<
CMD: pkg-config --libs fftw3
EXIT: 0
STDOUT:
-L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -lfftw3
>>

Checking for FFTW library: 
COMPILE /tmp/eb-suH7ol/tmpOFZQlR.cpp:
---

#include <iostream>
#include <fftw3.h>

int main() {
  std::cout << fftw_version << "\n";
  return (0);
}

---
EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include /tmp/eb-suH7ol/tmpOFZQlR.cpp -o /tmp/eb-suH7ol/tmpOFZQlR.o
EXIT: 0
>>

EXEC <<
CMD: g++ /tmp/eb-suH7ol/tmpOFZQlR.o -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -lz -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -ltiff -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -lfftw3 -o a.out
EXIT: 0
>>

EXEC <<
CMD: ./a.out
EXIT: 0
STDOUT:
fftw-3.3.8-sse2-avx
>>

fftw-3.3.8-sse2-avx
Checking for Qt moc: EXEC <<
CMD: moc -v
EXIT: 1
STDERR:
Qt Meta Object Compiler version 63 (Qt 4.8.7)
>>

moc (version 4.8.7)
Checking for Qt qmake: EXEC <<
CMD: qmake -v
EXIT: 0
STDOUT:
QMake version 2.01a
Using Qt version 4.8.7 in /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib
>>

qmake (version 4.8.7)
Checking for Qt rcc: EXEC <<
CMD: rcc -v
EXIT: 1
STDERR:
Qt Resource Compiler version 4.8.7
>>

rcc (version 4.8.7)
Checking for Qt: 
source file "qt.h":
---
#include <QObject>

class Foo: public QObject {
  Q_OBJECT;
  public:
    Foo();
    ~Foo();
  public slots:
    void setValue(int value);
  signals:
    void valueChanged (int newValue);
  private:
    int value_;
};
---

source file "qt.cpp":
---
#include <iostream>
#include "qt.h"

Foo::Foo() : value_ (42) { connect (this, SIGNAL(valueChanged(int)), this, SLOT(setValue(int))); }

Foo::~Foo() { std::cout << qVersion() << "\n"; }

void Foo::setValue (int value) { value_ = value; }

int main() { Foo f; }
---

project file "qt.pro":
---
CONFIG += c++11
QT += core gui opengl svg
HEADERS += qt.h
SOURCES += qt.cpp
---
EXEC <<
CMD: qmake
EXIT: 0
>>

EXEC <<
CMD: moc qt.h -o qt_moc.cpp
EXIT: 0
>>

EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include qt.cpp -o qt.o
EXIT: 0
>>

EXEC <<
CMD: g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include qt_moc.cpp -o qt_moc.o
EXIT: 0
>>

EXEC <<
CMD: g++ -Wl,--sort-common,--as-needed -pthread -L/opt/ebsofts/Core/GCCcore/7.3.0/lib64 -L/opt/ebsofts/Core/GCCcore/7.3.0/lib -L/opt/ebsofts/Compiler/GCC/7.3.0-2.30/OpenBLAS/0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/ScaLAPACK/2.0.2-OpenBLAS-0.3.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Python/2.7.15/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Mesa/18.1.1/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/XZ/5.2.4/lib -L/opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/lib -lz -L/opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/lib -ltiff -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/lib -lfftw3 qt_moc.o qt.o -o qt -m64 -Wl,-O1 -Wl,-rpath,/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/usr/X11R6/lib64 -lQtSvg -L/opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/lib -L/usr/X11R6/lib64 -lQtOpenGL -lQtGui -lQtCore -lGL -lpthread
EXIT: 0
>>

EXEC <<
CMD: /tmp/eb-suH7ol/tmpO9KUvh/qt
EXIT: 0
STDOUT:
4.8.7
>>

4.8.7

writing configuration to file 'config': ok


== 2019-06-03 11:59:50,966 run.py:542 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w)
== 2019-06-03 11:59:50,969 easyblock.py:2752 DEBUG Not skipping build step (skippable: True, skip: None, skipsteps: [], module_only: False, force: True
== 2019-06-03 11:59:50,969 build_log.py:252 INFO building...
== 2019-06-03 11:59:50,969 easyblock.py:2760 INFO Starting build step
== 2019-06-03 11:59:50,970 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:50,970 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:50,970 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:50,970 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:50,971 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:50,971 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:50,971 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:50,971 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:50,971 templates.py:157 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2feeb90>
== 2019-06-03 11:59:50,971 templates.py:184 DEBUG version found in easyconfig is 3.0_RC3
== 2019-06-03 11:59:50,972 templates.py:236 DEBUG name: bitbucket_account, config: %(namelower)s
== 2019-06-03 11:59:50,972 templates.py:236 DEBUG name: github_account, config: MRtrix3
== 2019-06-03 11:59:50,972 templates.py:236 DEBUG name: name, config: MRtrix
== 2019-06-03 11:59:50,972 templates.py:236 DEBUG name: version, config: 3.0_RC3
== 2019-06-03 11:59:50,972 templates.py:236 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2019-06-03 11:59:50,973 templates.py:236 DEBUG name: versionprefix, config: 
== 2019-06-03 11:59:50,973 easyblock.py:2766 INFO Running method build_step part of step build
== 2019-06-03 11:59:50,973 run.py:173 DEBUG run_cmd: running cmd python build -verbose (in /dev/shm/ebbuild/MRtrix/3.0_RC3/foss-2018b-Python-2.7.15)
== 2019-06-03 11:59:50,973 run.py:192 INFO running cmd: python build -verbose 
== 2019-06-03 12:04:36,865 run.py:506 INFO cmd "python build -verbose" exited with exit code 0 and output:
active config is default

reading configuration from "config"...

getting git version in folder "."... not found

getting git version in folder "."... not found
version file "./core/version.cpp" is out of date - updating

getting git version in folder "."... not found
version file "./src/exec_version.cpp" is out of date - updating

compiling TODO list...
building targets: bin/warpinvert bin/warpinit bin/warpcorrect bin/warpconvert bin/warp2metric bin/voxel2mesh bin/voxel2fixel bin/vectorstats bin/tsfvalidate bin/tsfthreshold bin/tsfsmooth bin/tsfmult bin/tsfinfo bin/tsfdivide bin/transformconvert bin/transformcompose bin/transformcalc bin/tensor2metric bin/tcktransform bin/tckstats bin/tcksift2 bin/tcksift bin/tcksample bin/tckresample bin/tckmap bin/tckinfo bin/tckglobal bin/tckgen bin/tckedit bin/tckdfc bin/tckconvert bin/tck2fixel bin/tck2connectome bin/shview bin/shconv bin/shbasis bin/sh2response bin/sh2power bin/sh2peaks bin/sh2amp bin/peaks2amp bin/mtnormalise bin/mrview bin/mrtransform bin/mrthreshold bin/mrstats bin/mrresize bin/mrregister bin/mrpad bin/mrmetric bin/mrmath bin/mrinfo bin/mrhistogram bin/mrhistmatch bin/mrfilter bin/mredit bin/mrdump bin/mrdegibbs bin/mrcrop bin/mrconvert bin/mrclusterstats bin/mrcheckerboardmask bin/mrcat bin/mrcalc bin/mraverageheader bin/meshfilter bin/meshconvert bin/mesh2voxel bin/maskfilter bin/maskdump bin/labelconvert bin/label2mesh bin/label2colour bin/fod2fixel bin/fod2dec bin/fixelreorient bin/fixelcrop bin/fixelcorrespondence bin/fixelconvert bin/fixelcfestats bin/fixel2voxel bin/fixel2tsf bin/fixel2sh bin/dwinormalise bin/dwiextract bin/dwidenoise bin/dwi2tensor bin/dwi2mask bin/dwi2fod bin/dwi2adc bin/dirstat bin/dirsplit bin/dirorder bin/dirmerge bin/dirgen bin/dirflip bin/dcminfo bin/dcmedit bin/connectomestats bin/connectome2tck bin/amp2sh bin/amp2response bin/afdconnectivity bin/5ttedit bin/5ttcheck bin/5tt2vis bin/5tt2gmwmi
TODO list contains 505 items



  launching 40 threads

  g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/labelconvert.cpp -o tmp/cmd/labelconvert.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/directions/file.cpp -o tmp/src/dwi/directions/file.o
moc src/gui/opengl/lighting.h -o tmp/src/gui/opengl/lighting_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/tracking/method.cpp -o tmp/src/dwi/tractography/tracking/method.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrcalc.cpp -o tmp/cmd/mrcalc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/version.cpp -o tmp/core/version.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/projection.cpp -o tmp/src/gui/projection.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrdump.cpp -o tmp/cmd/mrdump.o
moc src/gui/shview/render_window.h -o tmp/src/gui/shview/render_window_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/registration/transform/rigid.cpp -o tmp/src/registration/transform/rigid.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/dicom/tree.cpp -o tmp/core/file/dicom/tree.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dirstat.cpp -o tmp/cmd/dirstat.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/shapes/cylinder.cpp -o tmp/src/gui/shapes/cylinder.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrconvert.cpp -o tmp/cmd/mrconvert.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/dicom/dict.cpp -o tmp/core/file/dicom/dict.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/mapper.cpp -o tmp/src/dwi/tractography/mapping/mapper.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dwiextract.cpp -o tmp/cmd/dwiextract.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/directions/set.cpp -o tmp/src/dwi/directions/set.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/app.cpp -o tmp/core/app.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/upsampler.cpp -o tmp/src/dwi/tractography/resampling/upsampler.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include cmd/shview.cpp -o tmp/cmd/shview.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/twi_stats.cpp -o tmp/src/dwi/tractography/mapping/twi_stats.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tsfmult.cpp -o tmp/cmd/tsfmult.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/xds.cpp -o tmp/core/formats/xds.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/warpinvert.cpp -o tmp/cmd/warpinvert.o
moc src/gui/mrview/tool/odf/preview.h -o tmp/src/gui/mrview/tool/odf/preview_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/mode/volume.cpp -o tmp/src/gui/mrview/mode/volume.o
moc src/gui/mrview/tool/screen_capture.h -o tmp/src/gui/mrview/tool/screen_capture_moc.cpp
moc src/gui/mrview/tool/connectome/node_list.h -o tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp
moc src/gui/mrview/tool/view.h -o tmp/src/gui/mrview/tool/view_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/odf/item.cpp -o tmp/src/gui/mrview/tool/odf/item.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/gui.cpp -o tmp/src/gui/gui.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrcheckerboardmask.cpp -o tmp/cmd/mrcheckerboardmask.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/base.cpp -o tmp/src/gui/mrview/tool/base.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/connectome/lut.cpp -o tmp/src/connectome/lut.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/surface/freesurfer.cpp -o tmp/src/surface/freesurfer.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/phase_encoding.cpp -o tmp/core/phase_encoding.o
moc src/gui/mrview/tool/tractography/tractography.h -o tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/surface/mesh_multi.cpp -o tmp/src/surface/mesh_multi.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrthreshold.cpp -o tmp/cmd/mrthreshold.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/image_io/ram.cpp -o tmp/core/image_io/ram.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/fixel/base_fixel.cpp -o tmp/src/gui/mrview/tool/fixel/base_fixel.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tckmap.cpp -o tmp/cmd/tckmap.o
moc src/gui/dialog/image_properties.h -o tmp/src/gui/dialog/image_properties_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/registration/transform/initialiser.cpp -o tmp/src/registration/transform/initialiser.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/math/SH.cpp -o tmp/core/math/SH.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/adjust_button.cpp -o tmp/src/gui/mrview/adjust_button.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/node.cpp -o tmp/src/gui/mrview/tool/connectome/node.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/color_button.cpp -o tmp/src/gui/color_button.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/5ttedit.cpp -o tmp/cmd/5ttedit.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/roi.cpp -o tmp/src/dwi/tractography/roi.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dirgen.cpp -o tmp/cmd/dirgen.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/matrix_list.cpp -o tmp/src/gui/mrview/tool/connectome/matrix_list.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tcksample.cpp -o tmp/cmd/tcksample.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/tractography/tractography.cpp -o tmp/src/gui/mrview/tool/tractography/tractography.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrclusterstats.cpp -o tmp/cmd/mrclusterstats.o
moc src/gui/mrview/tool/tractography/tractogram.h -o tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/fmls.cpp -o tmp/src/dwi/fmls.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/surface/filter/vertex_transform.cpp -o tmp/src/surface/filter/vertex_transform.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/nifti2_gz.cpp -o tmp/core/formats/nifti2_gz.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/stats/tfce.cpp -o tmp/src/stats/tfce.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrhistogram.cpp -o tmp/cmd/mrhistogram.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include cmd/mrview.cpp -o tmp/cmd/mrview.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/sh2amp.cpp -o tmp/cmd/sh2amp.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/nifti1_utils.cpp -o tmp/core/file/nifti1_utils.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/fixed_num_points.cpp -o tmp/src/dwi/tractography/resampling/fixed_num_points.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/warpconvert.cpp -o tmp/cmd/warpconvert.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/dicom.cpp -o tmp/core/formats/dicom.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/maskdump.cpp -o tmp/cmd/maskdump.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/meshfilter.cpp -o tmp/cmd/meshfilter.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/dialog/report_exception.cpp -o tmp/src/gui/dialog/report_exception.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/editing/editing.cpp -o tmp/src/dwi/tractography/editing/editing.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/5ttcheck.cpp -o tmp/cmd/5ttcheck.o
rcc icons/shview.qrc -o tmp/src/gui/shview/icons.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/particlegrid.cpp -o tmp/src/dwi/tractography/GT/particlegrid.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/dialog/dialog.cpp -o tmp/src/gui/dialog/dialog.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/endpoints.cpp -o tmp/src/dwi/tractography/resampling/endpoints.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrdegibbs.cpp -o tmp/cmd/mrdegibbs.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/surface/filter/smooth.cpp -o tmp/src/surface/filter/smooth.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/tckfactor.cpp -o tmp/src/dwi/tractography/SIFT2/tckfactor.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/rng.cpp -o tmp/src/dwi/tractography/rng.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/screen_capture_moc.cpp -o tmp/src/gui/mrview/tool/screen_capture_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/displayable.cpp -o tmp/src/gui/mrview/displayable.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/shview/render_window_moc.cpp -o tmp/src/gui/shview/render_window_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/connectome/matrix.cpp -o tmp/src/dwi/tractography/connectome/matrix.o
moc src/gui/mrview/mode/lightbox.h -o tmp/src/gui/mrview/mode/lightbox_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/connectome/extract.cpp -o tmp/src/dwi/tractography/connectome/extract.o
(  1/505) [CC] tmp/cmd/labelconvert.o
(  3/505) [CC] tmp/src/dwi/directions/file.o
(  4/505) [MOC] tmp/src/gui/opengl/lighting_moc.cpp
(  2/505) [CC] tmp/src/dwi/tractography/tracking/method.o
(  5/505) [CC] tmp/cmd/mrcalc.o
(  6/505) [CC] tmp/core/version.o
(  7/505) [CC] tmp/src/gui/projection.o
(  8/505) [CC] tmp/cmd/mrdump.o
( 10/505) [CC] tmp/src/registration/transform/rigid.o
(  9/505) [CC] tmp/core/file/dicom/tree.o
( 11/505) [MOC] tmp/src/gui/shview/render_window_moc.cpp
( 13/505) [CC] tmp/cmd/dirstat.o
( 14/505) [CC] tmp/src/gui/shapes/cylinder.o
( 15/505) [CC] tmp/cmd/mrconvert.o
( 12/505) [CC] tmp/src/dwi/tractography/resampling/upsampler.o
( 16/505) [CC] tmp/src/dwi/tractography/mapping/mapper.o
( 17/505) [CC] tmp/cmd/dwiextract.o
( 18/505) [CC] tmp/src/dwi/directions/set.o
( 20/505) [CC] tmp/core/app.o
( 19/505) [CC] tmp/core/file/dicom/dict.o
( 21/505) [CC] tmp/src/dwi/tractography/mapping/twi_stats.o
( 22/505) [CC] tmp/cmd/tsfmult.o
( 24/504) [CC] tmp/core/formats/xds.o
( 23/504) [CC] tmp/cmd/warpinvert.o
( 25/504) [MOC] tmp/src/gui/mrview/tool/odf/preview_moc.cpp
( 28/504) [CC] tmp/cmd/shview.o
( 29/505) [CC] tmp/src/gui/mrview/mode/volume.o
( 27/504) [MOC] tmp/src/gui/mrview/tool/screen_capture_moc.cpp
( 30/503) [MOC] tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp
( 31/503) [MOC] tmp/src/gui/mrview/tool/view_moc.cpp
( 32/503) [CC] tmp/src/gui/mrview/tool/odf/item.o
( 33/503) [CC] tmp/src/gui/gui.o
( 34/503) [CC] tmp/cmd/mrcheckerboardmask.o
( 35/503) [CC] tmp/src/gui/mrview/tool/base.o
( 26/504) [CC] tmp/src/connectome/lut.o
( 36/503) [CC] tmp/src/surface/freesurfer.o
( 37/503) [CC] tmp/core/phase_encoding.o
( 38/503) [MOC] tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp
( 39/503) [CC] tmp/src/surface/mesh_multi.o
( 40/503) [CC] tmp/cmd/mrthreshold.o
( 41/503) [CC] tmp/core/image_io/ram.o
( 42/503) [CC] tmp/src/gui/mrview/tool/fixel/base_fixel.o
( 43/503) [CC] tmp/cmd/tckmap.o
( 44/503) [MOC] tmp/src/gui/dialog/image_properties_moc.cpp
( 45/503) [CC] tmp/src/registration/transform/initialiser.o
( 46/503) [CC] tmp/core/math/SH.o
( 47/503) [CC] tmp/src/gui/mrview/adjust_button.o
( 48/505) [CC] tmp/src/gui/mrview/tool/connectome/node.o
( 49/505) [CC] tmp/src/gui/color_button.o
( 50/505) [CC] tmp/cmd/5ttedit.o
( 51/505) [CC] tmp/src/dwi/tractography/roi.o
( 52/503) [CC] tmp/cmd/dirgen.o
( 53/504) [CC] tmp/src/gui/mrview/tool/connectome/matrix_list.o
( 54/503) [CC] tmp/cmd/tcksample.o
( 55/503) [CC] tmp/src/gui/mrview/tool/tractography/tractography.o
( 56/504) [CC] tmp/cmd/mrclusterstats.o
( 57/504) [MOC] tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp
( 58/505) [CC] tmp/src/dwi/fmls.o
( 59/504) [CC] tmp/src/surface/filter/vertex_transform.o
( 60/505) [CC] tmp/core/formats/nifti2_gz.o
( 61/503) [CC] tmp/src/stats/tfce.o
( 62/505) [CC] tmp/cmd/mrhistogram.o
( 63/505) [CC] tmp/cmd/mrview.o
( 64/503) [CC] tmp/cmd/sh2amp.o
( 65/505) [CC] tmp/core/file/nifti1_utils.o
( 66/505) [CC] tmp/src/dwi/tractography/resampling/fixed_num_points.o
( 67/505) [CC] tmp/cmd/warpconvert.o
( 68/503) [CC] tmp/core/formats/dicom.o
( 69/504) [CC] tmp/cmd/maskdump.o
( 70/504) [CC] tmp/cmd/meshfilter.o
( 71/503) [CC] tmp/src/gui/dialog/report_exception.o
( 72/505) [CC] tmp/src/dwi/tractography/editing/editing.o
( 73/503) [CC] tmp/cmd/5ttcheck.o
( 74/505) [RCC] tmp/src/gui/shview/icons.cpp
( 75/505) [CC] tmp/src/dwi/tractography/GT/particlegrid.o
( 76/504) [CC] tmp/src/gui/dialog/dialog.o
( 77/505) [CC] tmp/src/dwi/tractography/resampling/endpoints.o
( 78/505) [CC] tmp/cmd/mrdegibbs.o
( 79/503) [CC] tmp/src/surface/filter/smooth.o
( 81/505) [CC] tmp/src/dwi/tractography/SIFT2/tckfactor.o
( 80/505) [CC] tmp/src/dwi/tractography/rng.o
( 82/504) [CC] tmp/src/gui/mrview/tool/screen_capture_moc.o
( 83/505) [CC] tmp/src/gui/mrview/displayable.o
( 84/505) [CC] tmp/src/gui/shview/render_window_moc.o
( 85/505) [CC] tmp/src/dwi/tractography/connectome/matrix.o
( 86/505) [MOC] tmp/src/gui/mrview/mode/lightbox_moc.cpp
( 87/504) [CC] tmp/src/dwi/tractography/connectome/extract.o
( 88/505) [CC] tmp/src/gui/mrview/colourmap_buttg++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/colourmap_button.cpp -o tmp/src/gui/mrview/colourmap_button.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/odf/odf.cpp -o tmp/src/gui/mrview/tool/odf/odf.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/directions/predefined.cpp -o tmp/src/dwi/directions/predefined.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrstats.cpp -o tmp/cmd/mrstats.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/fixel_td_map.cpp -o tmp/src/dwi/tractography/mapping/fixel_td_map.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/editing/receiver.cpp -o tmp/src/dwi/tractography/editing/receiver.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/seeding/basic.cpp -o tmp/src/dwi/tractography/seeding/basic.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/opengl/lighting_moc.cpp -o tmp/src/gui/opengl/lighting_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tckinfo.cpp -o tmp/cmd/tckinfo.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/stats/permstack.cpp -o tmp/src/stats/permstack.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dirsplit.cpp -o tmp/cmd/dirsplit.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/odf/model.cpp -o tmp/src/gui/mrview/tool/odf/model.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/dicom/series.cpp -o tmp/core/file/dicom/series.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tckglobal.cpp -o tmp/cmd/tckglobal.o
moc src/gui/mrview/combo_box_error.h -o tmp/src/gui/mrview/combo_box_error_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/nifti1.cpp -o tmp/core/formats/nifti1.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/node_overlay.cpp -o tmp/src/gui/mrview/tool/connectome/node_overlay.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/shapes/sphere.cpp -o tmp/src/gui/shapes/sphere.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/mri.cpp -o tmp/core/formats/mri.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dwi2adc.cpp -o tmp/cmd/dwi2adc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/gaussian/mapper.cpp -o tmp/src/dwi/tractography/mapping/gaussian/mapper.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/math/average_space.cpp -o tmp/core/math/average_space.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/gradient.cpp -o tmp/src/dwi/gradient.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrfilter.cpp -o tmp/cmd/mrfilter.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/ACT/act.cpp -o tmp/src/dwi/tractography/ACT/act.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/dicom/element.cpp -o tmp/core/file/dicom/element.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/editing/worker.cpp -o tmp/src/dwi/tractography/editing/worker.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tsfthreshold.cpp -o tmp/cmd/tsfthreshold.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/combo_box_error.cpp -o tmp/src/gui/mrview/combo_box_error.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/meshconvert.cpp -o tmp/cmd/meshconvert.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/fixel/legacy.cpp -o tmp/src/gui/mrview/tool/fixel/legacy.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/registration/nonlinear.cpp -o tmp/src/registration/nonlinear.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/amp2response.cpp -o tmp/cmd/amp2response.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/name_parser.cpp -o tmp/core/file/name_parser.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tck2connectome.cpp -o tmp/cmd/tck2connectome.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/tracking/write_kernel.cpp -o tmp/src/dwi/tractography/tracking/write_kernel.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/seeding/list.cpp -o tmp/src/dwi/tractography/seeding/list.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/maskfilter.cpp -o tmp/cmd/maskfilter.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/stats.cpp -o tmp/core/stats.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/gui_image.cpp -o tmp/src/gui/mrview/gui_image.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/mapping.cpp -o tmp/src/dwi/tractography/mapping/mapping.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/window.cpp -o tmp/src/gui/mrview/window.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrresize.cpp -o tmp/cmd/mrresize.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tsfvalidate.cpp -o tmp/cmd/tsfvalidate.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/volume.cpp -o tmp/src/gui/mrview/volume.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/shaders.cpp -o tmp/src/gui/mrview/tool/connectome/shaders.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/cursor.cpp -o tmp/src/gui/cursor.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/file_data_vector.cpp -o tmp/src/gui/mrview/tool/connectome/file_data_vector.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/tracking/tractography.cpp -o tmp/src/dwi/tractography/tracking/tractography.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/sifter.cpp -o tmp/src/dwi/tractography/SIFT/sifter.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/mode/slice.cpp -o tmp/src/gui/mrview/mode/slice.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/dicom/patient.cpp -o tmp/core/file/dicom/patient.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/connectome.cpp -o tmp/src/gui/mrview/tool/connectome/connectome.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/mrtrix.cpp -o tmp/core/formats/mrtrix.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tckdfc.cpp -o tmp/cmd/tckdfc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/5tt2gmwmi.cpp -o tmp/cmd/5tt2gmwmi.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/warpinit.cpp -o tmp/cmd/warpinit.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/dialog/image_properties.cpp -o tmp/src/gui/dialog/image_properties.o
moc src/gui/mrview/tool/roi_editor/roi.h -o tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tckresample.cpp -o tmp/cmd/tckresample.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/externalenergy.cpp -o tmp/src/dwi/tractography/GT/externalenergy.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/surface/algo/mesh2image.cpp -o tmp/src/surface/algo/mesh2image.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/tractography/track_scalar_file.cpp -o tmp/src/gui/mrview/tool/tractography/track_scalar_file.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/dicom/select_cmdline.cpp -o tmp/core/file/dicom/select_cmdline.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tcksift.cpp -o tmp/cmd/tcksift.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/shview/render_window.cpp -o tmp/src/gui/shview/render_window.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mesh2voxel.cpp -o tmp/cmd/mesh2voxel.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/connectome/enhance.cpp -o tmp/src/connectome/enhance.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/surface/scalar.cpp -o tmp/src/surface/scalar.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/dialog/progress.cpp -o tmp/src/gui/dialog/progress.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/nifti2_utils.cpp -o tmp/core/file/nifti2_utils.o
moc src/gui/lighting_dock.h -o tmp/src/gui/lighting_dock_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrhistmatch.cpp -o tmp/cmd/mrhistmatch.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/sh2response.cpp -o tmp/cmd/sh2response.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/5tt2vis.cpp -o tmp/cmd/5tt2vis.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/node_list.cpp -o tmp/src/gui/mrview/tool/connectome/node_list.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/fixelconvert.cpp -o tmp/cmd/fixelconvert.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrcrop.cpp -o tmp/cmd/mrcrop.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/bitset.cpp -o tmp/core/bitset.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/connectomestats.cpp -o tmp/cmd/connectomestats.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tsfdivide.cpp -o tmp/cmd/tsfdivide.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/signal_handler.cpp -o tmp/core/signal_handler.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/overlay.cpp -o tmp/src/gui/mrview/tool/overlay.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/shells.cpp -o tmp/src/dwi/shells.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/ACT/gmwmi.cpp -o tmp/src/dwi/tractography/ACT/gmwmi.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/shview/icons.cpp -o tmp/src/gui/shview/icons.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/stats/permtest.cpp -o tmp/src/stats/permtest.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dirflip.cpp -o tmp/cmd/dirflip.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrregister.cpp -o tmp/cmd/mrregister.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tsfsmooth.cpp -o tmp/cmd/tsfsmooth.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/gt.cpp -o tmp/src/dwi/tractography/GT/gt.o
on.o
( 89/505) [CC] tmp/src/gui/mrview/tool/odf/odf.o
( 90/503) [CC] tmp/src/dwi/directions/predefined.o
( 91/505) [CC] tmp/cmd/mrstats.o
( 92/505) [CC] tmp/src/dwi/tractography/mapping/fixel_td_map.o
( 93/503) [CC] tmp/src/dwi/tractography/editing/receiver.o
( 94/505) [CC] tmp/src/dwi/tractography/seeding/basic.o
( 95/505) [CC] tmp/src/gui/opengl/lighting_moc.o
( 96/505) [CC] tmp/cmd/tckinfo.o
( 97/504) [CC] tmp/src/stats/permstack.o
( 98/503) [CC] tmp/cmd/dirsplit.o
( 99/505) [CC] tmp/src/gui/mrview/tool/odf/model.o
(100/505) [CC] tmp/core/file/dicom/series.o
(101/503) [CC] tmp/cmd/tckglobal.o
(102/504) [MOC] tmp/src/gui/mrview/combo_box_error_moc.cpp
(103/504) [CC] tmp/core/formats/nifti1.o
(104/504) [CC] tmp/src/gui/mrview/tool/connectome/node_overlay.o
(105/505) [CC] tmp/src/gui/shapes/sphere.o
(106/503) [CC] tmp/core/formats/mri.o
(107/505) [CC] tmp/cmd/dwi2adc.o
(108/504) [CC] tmp/src/dwi/tractography/mapping/gaussian/mapper.o
(109/503) [CC] tmp/core/math/average_space.o
(110/505) [CC] tmp/src/dwi/gradient.o
(111/505) [CC] tmp/cmd/mrfilter.o
(112/505) [CC] tmp/src/dwi/tractography/ACT/act.o
(113/505) [CC] tmp/core/file/dicom/element.o
(114/504) [CC] tmp/src/dwi/tractography/editing/worker.o
(115/505) [CC] tmp/cmd/tsfthreshold.o
(116/505) [CC] tmp/src/gui/mrview/combo_box_error.o
(117/503) [CC] tmp/cmd/meshconvert.o
(119/503) [CC] tmp/src/gui/mrview/tool/fixel/legacy.o
(118/503) [CC] tmp/src/registration/nonlinear.o
(120/504) [CC] tmp/cmd/amp2response.o
(121/503) [CC] tmp/core/file/name_parser.o
(122/505) [CC] tmp/cmd/tck2connectome.o
(123/504) [CC] tmp/src/dwi/tractography/tracking/write_kernel.o
(124/505) [CC] tmp/src/dwi/tractography/seeding/list.o
(125/505) [CC] tmp/cmd/maskfilter.o
(126/504) [CC] tmp/core/stats.o
(127/503) [CC] tmp/src/gui/mrview/gui_image.o
(128/503) [CC] tmp/src/dwi/tractography/mapping/mapping.o
(129/505) [CC] tmp/src/gui/mrview/window.o
(130/505) [CC] tmp/cmd/mrresize.o
(131/505) [CC] tmp/cmd/tsfvalidate.o
(132/505) [CC] tmp/src/gui/mrview/volume.o
(133/503) [CC] tmp/src/gui/mrview/tool/connectome/shaders.o
(134/504) [CC] tmp/src/gui/cursor.o
(135/505) [CC] tmp/src/gui/mrview/tool/connectome/file_data_vector.o
(136/505) [CC] tmp/src/dwi/tractography/tracking/tractography.o
(137/505) [CC] tmp/src/dwi/tractography/SIFT/sifter.o
(138/505) [CC] tmp/src/gui/mrview/mode/slice.o
(139/503) [CC] tmp/core/file/dicom/patient.o
(140/503) [CC] tmp/src/gui/mrview/tool/connectome/connectome.o
(141/505) [CC] tmp/core/formats/mrtrix.o
(142/504) [CC] tmp/cmd/tckdfc.o
(143/505) [CC] tmp/cmd/5tt2gmwmi.o
(144/504) [CC] tmp/cmd/warpinit.o
(145/504) [CC] tmp/src/gui/dialog/image_properties.o
(146/503) [MOC] tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp
(147/503) [CC] tmp/cmd/tckresample.o
(148/504) [CC] tmp/src/dwi/tractography/GT/externalenergy.o
(149/505) [CC] tmp/src/surface/algo/mesh2image.o
(150/505) [CC] tmp/src/gui/mrview/tool/tractography/track_scalar_file.o
(151/504) [CC] tmp/core/file/dicom/select_cmdline.o
(152/503) [CC] tmp/cmd/tcksift.o
(153/505) [CC] tmp/src/gui/shview/render_window.o
(154/505) [CC] tmp/cmd/mesh2voxel.o
(155/505) [CC] tmp/src/connectome/enhance.o
(156/505) [CC] tmp/src/surface/scalar.o
(157/503) [CC] tmp/src/gui/dialog/progress.o
(158/504) [CC] tmp/core/file/nifti2_utils.o
(159/505) [MOC] tmp/src/gui/lighting_dock_moc.cpp
(160/505) [CC] tmp/cmd/mrhistmatch.o
(161/503) [CC] tmp/cmd/sh2response.o
(162/505) [CC] tmp/cmd/5tt2vis.o
(163/505) [CC] tmp/src/gui/mrview/tool/connectome/node_list.o
(164/505) [CC] tmp/cmd/fixelconvert.o
(165/503) [CC] tmp/cmd/mrcrop.o
(166/503) [CC] tmp/core/bitset.o
(167/503) [CC] tmp/cmd/connectomestats.o
(168/505) [CC] tmp/cmd/tsfdivide.o
(169/503) [CC] tmp/core/signal_handler.o
(170/503) [CC] tmp/src/gui/mrview/tool/overlay.o
(171/504) [CC] tmp/src/dwi/shells.o
(172/505) [CC] tmp/src/dwi/tractography/ACT/gmwmi.o
(173/505) [CC] tmp/src/gui/shview/icons.o
(174/505) [CC] tmp/src/stats/permtest.o
(175/503) [CC] tmp/cmd/dirflip.o
(176/505) [CC] tmp/cmd/mrregister.o
(177/505) [CC] tmp/cmd/tsfsmooth.o
(178/505) [CC] tmp/src/dwi/tractography/GT/gt.o
(179/503) [CCg++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/line_search.cpp -o tmp/src/dwi/tractography/SIFT2/line_search.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/registration/transform/initialiser_helpers.cpp -o tmp/src/registration/transform/initialiser_helpers.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tcksift2.cpp -o tmp/cmd/tcksift2.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tcktransform.cpp -o tmp/cmd/tcktransform.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/screen_capture.cpp -o tmp/src/gui/mrview/tool/screen_capture.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/tracking/early_exit.cpp -o tmp/src/dwi/tractography/tracking/early_exit.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/gradient_sort.cpp -o tmp/src/dwi/tractography/SIFT/gradient_sort.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/writer.cpp -o tmp/src/dwi/tractography/mapping/writer.o
moc src/gui/mrview/tool/odf/odf.h -o tmp/src/gui/mrview/tool/odf/odf_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mtnormalise.cpp -o tmp/cmd/mtnormalise.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/config.cpp -o tmp/core/file/config.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/particle.cpp -o tmp/src/dwi/tractography/GT/particle.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/weights.cpp -o tmp/src/dwi/tractography/weights.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/fixel/fixel.cpp -o tmp/src/gui/mrview/tool/fixel/fixel.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/list.cpp -o tmp/core/formats/list.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/file_base.cpp -o tmp/src/dwi/tractography/file_base.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/sh2power.cpp -o tmp/cmd/sh2power.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/exception.cpp -o tmp/core/exception.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/mgz.cpp -o tmp/core/formats/mgz.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tckstats.cpp -o tmp/cmd/tckstats.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/mapper_plugins.cpp -o tmp/src/dwi/tractography/mapping/mapper_plugins.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/roi_editor/undoentry.cpp -o tmp/src/gui/mrview/tool/roi_editor/undoentry.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/tracking/shared.cpp -o tmp/src/dwi/tractography/tracking/shared.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrmetric.cpp -o tmp/cmd/mrmetric.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/image_io/pipe.cpp -o tmp/core/image_io/pipe.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/image_io/tiff.cpp -o tmp/core/image_io/tiff.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/seeding/gmwmi.cpp -o tmp/src/dwi/tractography/seeding/gmwmi.o
moc src/gui/mrview/mode/ortho.h -o tmp/src/gui/mrview/mode/ortho_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/math/stats/glm.cpp -o tmp/core/math/stats/glm.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp -o tmp/src/gui/mrview/tool/tractography/tractography_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/sift.cpp -o tmp/src/dwi/tractography/SIFT/sift.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/shconv.cpp -o tmp/cmd/shconv.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/registration/transform/convergence_check.cpp -o tmp/src/registration/transform/convergence_check.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/dwi/renderer.cpp -o tmp/src/gui/dwi/renderer.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/opengl/shader.cpp -o tmp/src/gui/opengl/shader.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/image_io/mosaic.cpp -o tmp/core/image_io/mosaic.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/opengl/lighting.cpp -o tmp/src/gui/opengl/lighting.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/adapter/reslice.cpp -o tmp/core/adapter/reslice.o
moc src/gui/mrview/tool/connectome/connectome.h -o tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/connectome/exemplar.cpp -o tmp/src/dwi/tractography/connectome/exemplar.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/mrtrix_sparse_legacy.cpp -o tmp/core/formats/mrtrix_sparse_legacy.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/lighting_dock_moc.cpp -o tmp/src/gui/lighting_dock_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/json_utils.cpp -o tmp/core/file/json_utils.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/mmap.cpp -o tmp/core/file/mmap.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tckconvert.cpp -o tmp/cmd/tckconvert.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/registration/linear.cpp -o tmp/src/registration/linear.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/transformcalc.cpp -o tmp/cmd/transformcalc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/fixelcrop.cpp -o tmp/cmd/fixelcrop.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/mhsampler.cpp -o tmp/src/dwi/tractography/GT/mhsampler.o
moc src/gui/mrview/tool/overlay.h -o tmp/src/gui/mrview/tool/overlay_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/overlay_moc.cpp -o tmp/src/gui/mrview/tool/overlay_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/opengl/gl.cpp -o tmp/src/gui/opengl/gl.o
rcc icons/mrview.qrc -o tmp/src/gui/mrview/icons.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/mrtrix.cpp -o tmp/core/mrtrix.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/fixed_step_size.cpp -o tmp/src/dwi/tractography/resampling/fixed_step_size.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dcminfo.cpp -o tmp/cmd/dcminfo.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/roi_editor/roi.cpp -o tmp/src/gui/mrview/tool/roi_editor/roi.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrmath.cpp -o tmp/cmd/mrmath.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/shapes/cube.cpp -o tmp/src/gui/shapes/cube.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/surface/mesh.cpp -o tmp/src/surface/mesh.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/dialog/dicom.cpp -o tmp/src/gui/dialog/dicom.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/ofstream.cpp -o tmp/core/file/ofstream.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/exec_version.cpp -o tmp/src/exec_version.o
moc src/gui/mrview/tool/fixel/fixel.h -o tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp -o tmp/src/gui/mrview/tool/fixel/fixel_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/dialog/list.cpp -o tmp/src/gui/dialog/list.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/roi_editor/item.cpp -o tmp/src/gui/mrview/tool/roi_editor/item.o
moc src/gui/dwi/render_frame.h -o tmp/src/gui/dwi/render_frame_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/dwi/render_frame_moc.cpp -o tmp/src/gui/dwi/render_frame_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/warpcorrect.cpp -o tmp/cmd/warpcorrect.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/image_io/scratch.cpp -o tmp/core/image_io/scratch.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dcmedit.cpp -o tmp/cmd/dcmedit.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/dicom/mapper.cpp -o tmp/core/file/dicom/mapper.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/mgh.cpp -o tmp/core/formats/mgh.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/mode/ortho_moc.cpp -o tmp/src/gui/mrview/mode/ortho_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/fixelreorient.cpp -o tmp/cmd/fixelreorient.o
moc src/gui/mrview/colourmap_button.h -o tmp/src/gui/mrview/colourmap_button_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/directions/mask.cpp -o tmp/src/dwi/directions/mask.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tckgen.cpp -o tmp/cmd/tckgen.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/axes.cpp -o tmp/core/axes.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/downsampler.cpp -o tmp/src/dwi/tractography/resampling/downsampler.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/tiff.cpp -o tmp/core/file/tiff.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/datatype.cpp -o tmp/core/datatype.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/header.cpp -o tmp/core/header.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/algorithms/iFOD2.cpp -o tmp/src/dwi/tractography/algorithms/iFOD2.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/shapes/halfsphere.cpp -o tmp/src/gui/shapes/halfsphere.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/label2colour.cpp -o tmp/cmd/label2colour.o
] tmp/src/dwi/tractography/SIFT2/line_search.o
(180/505) [CC] tmp/src/registration/transform/initialiser_helpers.o
(181/505) [CC] tmp/cmd/tcksift2.o
(182/505) [CC] tmp/cmd/tcktransform.o
(183/505) [CC] tmp/src/gui/mrview/tool/screen_capture.o
(184/504) [CC] tmp/src/dwi/tractography/tracking/early_exit.o
(185/505) [CC] tmp/src/dwi/tractography/SIFT/gradient_sort.o
(186/505) [CC] tmp/src/dwi/tractography/mapping/writer.o
(187/503) [MOC] tmp/src/gui/mrview/tool/odf/odf_moc.cpp
(188/503) [CC] tmp/cmd/mtnormalise.o
(189/505) [CC] tmp/core/file/config.o
(190/505) [CC] tmp/src/dwi/tractography/GT/particle.o
(191/505) [CC] tmp/src/dwi/tractography/weights.o
(192/505) [CC] tmp/src/gui/mrview/tool/fixel/fixel.o
(193/504) [CC] tmp/core/formats/list.o
(194/504) [CC] tmp/src/dwi/tractography/file_base.o
(195/505) [CC] tmp/cmd/sh2power.o
(196/505) [CC] tmp/core/exception.o
(197/505) [CC] tmp/core/formats/mgz.o
(198/505) [CC] tmp/cmd/tckstats.o
(200/505) [CC] tmp/src/dwi/tractography/mapping/mapper_plugins.o
(199/505) [CC] tmp/src/gui/mrview/tool/roi_editor/undoentry.o
(201/503) [CC] tmp/src/dwi/tractography/tracking/shared.o
(202/505) [CC] tmp/cmd/mrmetric.o
(203/504) [CC] tmp/core/image_io/pipe.o
(204/505) [CC] tmp/core/image_io/tiff.o
(205/505) [CC] tmp/src/dwi/tractography/seeding/gmwmi.o
(206/503) [MOC] tmp/src/gui/mrview/mode/ortho_moc.cpp
(207/503) [CC] tmp/core/math/stats/glm.o
(208/504) [CC] tmp/src/gui/mrview/tool/tractography/tractography_moc.o
(209/505) [CC] tmp/src/dwi/tractography/SIFT/sift.o
(210/505) [CC] tmp/cmd/shconv.o
(211/505) [CC] tmp/src/registration/transform/convergence_check.o
(212/503) [CC] tmp/src/gui/dwi/renderer.o
(213/505) [CC] tmp/src/gui/opengl/shader.o
(214/505) [CC] tmp/core/image_io/mosaic.o
(215/503) [CC] tmp/src/gui/opengl/lighting.o
(216/504) [CC] tmp/core/adapter/reslice.o
(217/505) [MOC] tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp
(218/505) [CC] tmp/src/dwi/tractography/connectome/exemplar.o
(219/505) [CC] tmp/core/formats/mrtrix_sparse_legacy.o
(220/505) [CC] tmp/src/gui/lighting_dock_moc.o
(221/503) [CC] tmp/core/file/json_utils.o
(222/503) [CC] tmp/core/file/mmap.o
(223/504) [CC] tmp/cmd/tckconvert.o
(224/505) [CC] tmp/src/registration/linear.o
(225/505) [CC] tmp/cmd/transformcalc.o
(226/504) [CC] tmp/cmd/fixelcrop.o
(227/504) [CC] tmp/src/dwi/tractography/GT/mhsampler.o
(228/505) [MOC] tmp/src/gui/mrview/tool/overlay_moc.cpp
(229/505) [CC] tmp/src/gui/mrview/tool/overlay_moc.o
(230/503) [CC] tmp/src/gui/opengl/gl.o
(231/504) [RCC] tmp/src/gui/mrview/icons.cpp
(232/503) [CC] tmp/core/mrtrix.o
(233/504) [CC] tmp/src/dwi/tractography/resampling/fixed_step_size.o
(234/505) [CC] tmp/cmd/dcminfo.o
(235/505) [CC] tmp/src/gui/mrview/tool/roi_editor/roi.o
(236/505) [CC] tmp/cmd/mrmath.o
(237/505) [CC] tmp/src/gui/shapes/cube.o
(238/503) [CC] tmp/src/surface/mesh.o
(239/505) [CC] tmp/src/gui/dialog/dicom.o
(240/505) [CC] tmp/core/file/ofstream.o
(241/505) [CC] tmp/src/exec_version.o
(242/505) [MOC] tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp
(243/505) [CC] tmp/src/gui/mrview/tool/fixel/fixel_moc.o
(244/504) [CC] tmp/src/gui/dialog/list.o
(245/504) [CC] tmp/src/gui/mrview/tool/roi_editor/item.o
(246/503) [MOC] tmp/src/gui/dwi/render_frame_moc.cpp
(247/503) [CC] tmp/src/gui/dwi/render_frame_moc.o
(248/505) [CC] tmp/cmd/warpcorrect.o
(249/504) [CC] tmp/core/image_io/scratch.o
(250/505) [CC] tmp/cmd/dcmedit.o
(251/505) [CC] tmp/core/file/dicom/mapper.o
(252/505) [CC] tmp/core/formats/mgh.o
(253/505) [CC] tmp/src/gui/mrview/mode/ortho_moc.o
(254/503) [CC] tmp/cmd/fixelreorient.o
(255/505) [MOC] tmp/src/gui/mrview/colourmap_button_moc.cpp
(256/505) [CC] tmp/src/dwi/directions/mask.o
(257/503) [CC] tmp/cmd/tckgen.o
(259/505) [CC] tmp/core/axes.o
(258/505) [CC] tmp/src/dwi/tractography/resampling/downsampler.o
(260/503) [CC] tmp/core/file/tiff.o
(261/504) [CC] tmp/core/datatype.o
(262/503) [CC] tmp/core/header.o
(263/504) [CC] tmp/src/dwi/tractography/algorithms/iFOD2.o
(264/504) [CC] tmp/src/gui/shapes/halfsphere.o
(265/503) [CC] tmp/cmd/label2colour.o
(266/505) [MOC] tmp/src/gui/mrview/displayablemoc src/gui/mrview/displayable.h -o tmp/src/gui/mrview/displayable_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/displayable_moc.cpp -o tmp/src/gui/mrview/displayable_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrtransform.cpp -o tmp/cmd/mrtransform.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/dialog/image_properties_moc.cpp -o tmp/src/gui/dialog/image_properties_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/mode/lightbox_moc.cpp -o tmp/src/gui/mrview/mode/lightbox_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/combo_box_error_moc.cpp -o tmp/src/gui/mrview/combo_box_error_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/colourmap_button_moc.cpp -o tmp/src/gui/mrview/colourmap_button_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/math/stats/permutation.cpp -o tmp/core/math/stats/permutation.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/fixel2tsf.cpp -o tmp/cmd/fixel2tsf.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/proc_mask.cpp -o tmp/src/dwi/tractography/SIFT/proc_mask.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/image_io/fetch_store.cpp -o tmp/core/image_io/fetch_store.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/track_contribution.cpp -o tmp/src/dwi/tractography/SIFT/track_contribution.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/odf/preview_moc.cpp -o tmp/src/gui/mrview/tool/odf/preview_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/track_index_range.cpp -o tmp/src/dwi/tractography/SIFT/track_index_range.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/properties.cpp -o tmp/src/dwi/tractography/properties.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/streamline_stats.cpp -o tmp/src/dwi/tractography/SIFT2/streamline_stats.o
moc src/gui/mrview/tool/tractography/track_scalar_file.h -o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp -o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/dwi/render_frame.cpp -o tmp/src/gui/dwi/render_frame.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/analyse.cpp -o tmp/core/formats/analyse.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/algo/histogram.cpp -o tmp/core/algo/histogram.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/transformcompose.cpp -o tmp/cmd/transformcompose.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/voxel2fixel.cpp -o tmp/cmd/voxel2fixel.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/fixelcorrespondence.cpp -o tmp/cmd/fixelcorrespondence.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/tiff.cpp -o tmp/core/formats/tiff.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/reg_calculator.cpp -o tmp/src/dwi/tractography/SIFT2/reg_calculator.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/colourmap_observers.cpp -o tmp/src/gui/mrview/tool/connectome/colourmap_observers.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/icons.cpp -o tmp/src/gui/mrview/icons.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/fixel2voxel.cpp -o tmp/cmd/fixel2voxel.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp -o tmp/src/gui/mrview/tool/connectome/node_list_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tckedit.cpp -o tmp/cmd/tckedit.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/image_io/sparse.cpp -o tmp/core/image_io/sparse.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/key_value.cpp -o tmp/core/file/key_value.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/seeding/seeding.cpp -o tmp/src/dwi/tractography/seeding/seeding.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tck2fixel.cpp -o tmp/cmd/tck2fixel.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/seeding/dynamic.cpp -o tmp/src/dwi/tractography/seeding/dynamic.o
moc src/gui/mrview/tool/connectome/selection.h -o tmp/src/gui/mrview/tool/connectome/selection_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/stride.cpp -o tmp/core/stride.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/nifti1_gz.cpp -o tmp/core/formats/nifti1_gz.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/colourmap.cpp -o tmp/src/gui/mrview/colourmap.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/mgh.cpp -o tmp/core/file/mgh.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/lighting_dock.cpp -o tmp/src/gui/lighting_dock.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/connectome/tck2nodes.cpp -o tmp/src/dwi/tractography/connectome/tck2nodes.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dwi2fod.cpp -o tmp/cmd/dwi2fod.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tsfinfo.cpp -o tmp/cmd/tsfinfo.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/arc.cpp -o tmp/src/dwi/tractography/resampling/arc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/selection.cpp -o tmp/src/gui/mrview/tool/connectome/selection.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dirmerge.cpp -o tmp/cmd/dirmerge.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/ram.cpp -o tmp/core/formats/ram.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/thread.cpp -o tmp/core/thread.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/nifti_utils.cpp -o tmp/core/file/nifti_utils.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/tractography/tractogram.cpp -o tmp/src/gui/mrview/tool/tractography/tractogram.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/dialog/file.cpp -o tmp/src/gui/dialog/file.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/tensor2metric.cpp -o tmp/cmd/tensor2metric.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/voxel2mesh.cpp -o tmp/cmd/voxel2mesh.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/fixel/directory.cpp -o tmp/src/gui/mrview/tool/fixel/directory.o
moc src/gui/gui.h -o tmp/src/gui/gui_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/gui_moc.cpp -o tmp/src/gui/gui_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/warp2metric.cpp -o tmp/cmd/warp2metric.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/pipe.cpp -o tmp/core/formats/pipe.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/fixel_updater.cpp -o tmp/src/dwi/tractography/SIFT2/fixel_updater.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/surface/filter/base.cpp -o tmp/src/surface/filter/base.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/sh2peaks.cpp -o tmp/cmd/sh2peaks.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/afdconnectivity.cpp -o tmp/cmd/afdconnectivity.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/mrtrix_utils.cpp -o tmp/core/formats/mrtrix_utils.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/transformconvert.cpp -o tmp/cmd/transformconvert.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrpad.cpp -o tmp/cmd/mrpad.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/fod2dec.cpp -o tmp/cmd/fod2dec.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/stats/cfe.cpp -o tmp/src/stats/cfe.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrinfo.cpp -o tmp/cmd/mrinfo.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/mode/ortho.cpp -o tmp/src/gui/mrview/mode/ortho.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mrcat.cpp -o tmp/cmd/mrcat.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/odf/odf_moc.cpp -o tmp/src/gui/mrview/tool/odf/odf_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/label2mesh.cpp -o tmp/cmd/label2mesh.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/internalenergy.cpp -o tmp/src/dwi/tractography/GT/internalenergy.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/dicom/study.cpp -o tmp/core/file/dicom/study.o
moc src/gui/color_button.h -o tmp/src/gui/color_button_moc.cpp
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/mraverageheader.cpp -o tmp/cmd/mraverageheader.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/connectome/connectome.cpp -o tmp/src/dwi/tractography/connectome/connectome.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/fixel2sh.cpp -o tmp/cmd/fixel2sh.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/connectome/selection_moc.cpp -o tmp/src/gui/mrview/tool/connectome/selection_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp -o tmp/src/gui/mrview/tool/tractography/tractogram_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/nifti2.cpp -o tmp/core/formats/nifti2.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/opengl/font.cpp -o tmp/src/gui/opengl/font.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dwinormalise.cpp -o tmp/cmd/dwinormalise.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/surface/polygon.cpp -o tmp/src/surface/polygon.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/shbasis.cpp -o tmp/cmd/shbasis.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dwi2mask.cpp -o tmp/cmd/dwi2mask.o
_moc.cpp
(267/505) [CC] tmp/src/gui/mrview/displayable_moc.o
(269/503) [CC] tmp/cmd/mrtransform.o
(268/503) [CC] tmp/src/gui/dialog/image_properties_moc.o
(270/505) [CC] tmp/src/gui/mrview/mode/lightbox_moc.o
(271/505) [CC] tmp/src/gui/mrview/combo_box_error_moc.o
(272/504) [CC] tmp/src/gui/mrview/colourmap_button_moc.o
(273/505) [CC] tmp/core/math/stats/permutation.o
(274/503) [CC] tmp/cmd/fixel2tsf.o
(275/503) [CC] tmp/src/dwi/tractography/SIFT/proc_mask.o
(276/505) [CC] tmp/core/image_io/fetch_store.o
(277/505) [CC] tmp/src/dwi/tractography/SIFT/track_contribution.o
(278/503) [CC] tmp/src/gui/mrview/tool/odf/preview_moc.o
(279/505) [CC] tmp/src/dwi/tractography/SIFT/track_index_range.o
(280/505) [CC] tmp/src/dwi/tractography/properties.o
(281/503) [CC] tmp/src/dwi/tractography/SIFT2/streamline_stats.o
(282/505) [MOC] tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp
(283/505) [CC] tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o
(284/505) [CC] tmp/src/gui/dwi/render_frame.o
(285/505) [CC] tmp/core/formats/analyse.o
(286/504) [CC] tmp/core/algo/histogram.o
(287/505) [CC] tmp/cmd/transformcompose.o
(288/505) [CC] tmp/cmd/voxel2fixel.o
(289/505) [CC] tmp/cmd/fixelcorrespondence.o
(290/505) [CC] tmp/core/formats/tiff.o
(291/503) [CC] tmp/src/dwi/tractography/SIFT2/reg_calculator.o
(292/505) [CC] tmp/src/gui/mrview/tool/connectome/colourmap_observers.o
(293/505) [CC] tmp/src/gui/mrview/icons.o
(294/505) [CC] tmp/cmd/fixel2voxel.o
(295/503) [CC] tmp/src/gui/mrview/tool/connectome/node_list_moc.o
(296/504) [CC] tmp/cmd/tckedit.o
(297/504) [CC] tmp/core/image_io/sparse.o
(298/505) [CC] tmp/core/file/key_value.o
(299/503) [CC] tmp/src/dwi/tractography/seeding/seeding.o
(300/504) [CC] tmp/cmd/tck2fixel.o
(301/505) [CC] tmp/src/dwi/tractography/seeding/dynamic.o
(302/504) [MOC] tmp/src/gui/mrview/tool/connectome/selection_moc.cpp
(303/504) [CC] tmp/core/stride.o
(304/504) [CC] tmp/core/formats/nifti1_gz.o
(305/505) [CC] tmp/src/gui/mrview/colourmap.o
(306/505) [CC] tmp/core/file/mgh.o
(307/505) [CC] tmp/src/gui/lighting_dock.o
(308/505) [CC] tmp/src/dwi/tractography/connectome/tck2nodes.o
(309/503) [CC] tmp/cmd/dwi2fod.o
(310/504) [CC] tmp/cmd/tsfinfo.o
(311/505) [CC] tmp/src/dwi/tractography/resampling/arc.o
(312/505) [CC] tmp/src/gui/mrview/tool/connectome/selection.o
(313/504) [CC] tmp/cmd/dirmerge.o
(314/503) [CC] tmp/core/formats/ram.o
(315/503) [CC] tmp/core/thread.o
(316/505) [CC] tmp/core/file/nifti_utils.o
(317/504) [CC] tmp/src/gui/mrview/tool/tractography/tractogram.o
(318/505) [CC] tmp/src/gui/dialog/file.o
(319/505) [CC] tmp/cmd/tensor2metric.o
(320/505) [CC] tmp/cmd/voxel2mesh.o
(321/503) [CC] tmp/src/gui/mrview/tool/fixel/directory.o
(322/503) [MOC] tmp/src/gui/gui_moc.cpp
(323/503) [CC] tmp/src/gui/gui_moc.o
(324/505) [CC] tmp/cmd/warp2metric.o
(325/503) [CC] tmp/core/formats/pipe.o
(326/505) [CC] tmp/src/dwi/tractography/SIFT2/fixel_updater.o
(327/503) [CC] tmp/src/surface/filter/base.o
(328/503) [CC] tmp/cmd/sh2peaks.o
(329/505) [CC] tmp/cmd/afdconnectivity.o
(330/504) [CC] tmp/core/formats/mrtrix_utils.o
(331/504) [CC] tmp/cmd/transformconvert.o
(332/505) [CC] tmp/cmd/mrpad.o
(333/505) [CC] tmp/cmd/fod2dec.o
(334/505) [CC] tmp/src/stats/cfe.o
(335/504) [CC] tmp/cmd/mrinfo.o
(336/505) [CC] tmp/src/gui/mrview/mode/ortho.o
(337/503) [CC] tmp/cmd/mrcat.o
(338/505) [CC] tmp/src/gui/mrview/tool/odf/odf_moc.o
(339/504) [CC] tmp/cmd/label2mesh.o
(340/505) [CC] tmp/src/dwi/tractography/GT/internalenergy.o
(341/503) [CC] tmp/core/file/dicom/study.o
(342/503) [MOC] tmp/src/gui/color_button_moc.cpp
(343/503) [CC] tmp/cmd/mraverageheader.o
(344/503) [CC] tmp/src/dwi/tractography/connectome/connectome.o
(345/505) [CC] tmp/cmd/fixel2sh.o
(346/504) [CC] tmp/src/gui/mrview/tool/connectome/selection_moc.o
(347/505) [CC] tmp/src/gui/mrview/tool/tractography/tractogram_moc.o
(348/503) [CC] tmp/core/formats/nifti2.o
(349/503) [CC] tmp/src/gui/opengl/font.o
(350/505) [CC] tmp/cmd/dwinormalise.o
(351/503) [CC] tmp/src/surface/polygon.o
(352/503) [CC] tmp/cmd/shbasis.o
(353/505) [CC] tmp/cmd/dwi2mask.o
(354/5g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/roi_editor/model.cpp -o tmp/src/gui/mrview/tool/roi_editor/model.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/math/bessel.cpp -o tmp/core/math/bessel.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/connectome/edge.cpp -o tmp/src/gui/mrview/tool/connectome/edge.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/mrview/tool/odf/preview.cpp -o tmp/src/gui/mrview/tool/odf/preview.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp -o tmp/src/gui/mrview/tool/roi_editor/roi_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/sdeconv/csd.cpp -o tmp/src/dwi/sdeconv/csd.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/coeff_optimiser.cpp -o tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/connectome/connectome.cpp -o tmp/src/connectome/connectome.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include src/gui/dialog/opengl.cpp -o tmp/src/gui/dialog/opengl.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/formats/mrtrix_gz.cpp -o tmp/core/formats/mrtrix_gz.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/image_io/default.cpp -o tmp/core/image_io/default.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/voxel.cpp -o tmp/src/dwi/tractography/mapping/voxel.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/dwi2tensor.cpp -o tmp/cmd/dwi2tensor.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE cmd/fixelcfestats.cpp -o tmp/cmd/fixelcfestats.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE core/file/dicom/image.cpp -o tmp/core/file/dicom/image.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtGui -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtOpenGL -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtSvg -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp -o tmp/src/gui/mrview/tool/connectome/connectome_moc.o
g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version" -pthread -fPIC -O2 -ftree-vectorize -march=core2 -fno-math-errno -std=c++11 -DMRTRIX_WORD64 -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/zlib/1.2.11/include -DMRTRIX_TIFF_SUPPORT -isystem /opt/ebsofts/Compiler/GCCcore/7.3.0/LibTIFF/4.0.9/include -DEIGEN_FFTW_DEFAULT -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/FFTW/3.3.8/include -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /opt/ebsofts/Core/Eigen/3.3.7//opt/ebsofts/Core/Eigen/3.3.7/include -DEIGEN_DONT_PARALLELIZE -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/mkspecs/linux-g++-64 -isystem /opt/ebsofts/MPI/GCC/7.3.0-2.30/OpenMPI/3.1.1/Qt/4.8.7/include/QtCore -isystem /opt/ebsofts/MPI