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yuifu/extract_specific_length_fastq.sh

Last active October 30, 2015 14:10
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Extract FASTQ entries with a specific sequence length
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extract_specific_length_fastq.sh
awk 'BEGIN{l=100}{if(NR%4==1){x=$0};if(length($0)==l){print x; print; getline; print; getline; print}}' foo.fastq
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