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Add native libraries to Apache Hadoop installation

Apache Hadoop - add native libraries

If native libraries are not available the following message is displayed with every hadoop command: hadoop checknative

WARN util.NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
  • Clone hadoop source code

$ git clone https://github.com/apache/hadoop.git
$ cd hadoop
  • Checkout the version 2.7.1 source

$ git checkout branch-2.7.1
  • Install required dependencies - OSX: use brew or any other package manager

$ brew install cmake
$ brew install zlib
$ brew install protobuf
$ brew install snappy
  • Build project and native dependencies with maven

$ mvn package -Pdist,native -DskipTests -Dtar
  • Copy newly created libraries to the hadoop installation

$ mkdir -p $HADOOP_INSTALL/lib/native/osx
$ cp -r hadoop-dist/target/hadoop-2.7.1/lib/native/* $HADOOP_INSTALL/lib/native/osx
  • Add shell variables either to the ~/.bash_profile, or $HADOOP_INSTALL/etc/hadoop/hadoop-env.sh

export HADOOP_OPTS="$HADOOP_OPTS -Djava.library.path=$HADOOP_INSTALL/lib/native/osx”

Check if native libraries are available:

$ hadoop checknative
Warning
above rules do not cause bzip2 native libs to work in OSX.
@mcwhitak
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The default version of protobuf installed by homebrew is 2.6.1 while 2.5.0 is what is necessary to build the native libraries. If you attempt to build using these instructions exactly you will encounter an error building the 'Apache Hadoop Common' project.

Install protobuf 2.5.0 instead by running brew install homebrew/versions/protobuf250
From there you can follow the instructions exactly.

@1ambda
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1ambda commented May 28, 2017

export OPENSSL_ROOT_DIR=$(brew --prefix openssl) might be helpful. If you are having trouble with building hadoop-pipes.

@1ambda
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1ambda commented May 28, 2017

And, the ending double quote in export HADOOP_OPTS="$HADOOP_OPTS -Djava.library.path=$HADOOP_INSTALL/lib/native/osx” is invalid. should be "

@1ambda
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1ambda commented May 28, 2017

If you are getting openssl false in the hadoop checknative command,

  • copy openssl related files and build again.
ln -sf /usr/local/opt/openssl/lib/libcrypto.dylib /usr/local/lib/libcrypto.dylib
ln -sf /usr/local/opt/openssl/lib/libssl.dylib /usr/local/lib/lib/libssl.dylib # might not exist
ln -sf /usr/local/opt/openssl/include/openssl /usr/local/include/openssl

(I am using OSX sierra)

@apendergrass
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I had to add brew link --force --overwrite protobuf250 to get protoc to work for the package to build. Updated from here.

@smatthewenglish
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@jsathish
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download protoc@250 source from
https://github.com/google/protobuf/releases/download/v2.5.0/protobuf-2.5.0.tar.bz2
and run below commands to build locally
tar xfvj protobuf-2.5.0.tar.bz2
protobuf-2.5.0/configure
make or make check
make install

@zhuguangbin
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brew install https://raw.githubusercontent.com/Homebrew/homebrew-core/0f0b2fc5e2541712b0bb06f74cc1559b1c884750/Formula/protobuf@2.5.rb

作者:tison
链接:https://www.zhihu.com/question/360006055/answer/928011185
来源:知乎
著作权归作者所有。商业转载请联系作者获得授权,非商业转载请注明出处。

@eastcirclek
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eastcirclek commented Aug 13, 2020

hadoop-pipes related

error

ld: cannot link directly with dylib/framework, your binary is not an allowed client of /usr/lib/libcrypto.dylib for architecture x86_64

situation

  • macOS Catalina
  • openssl 1.1 already installed by brew

solution

Open and modify hadoop-tools/hadoop-pipes/pom.xml

  • <openssl.prefix>/usr/local/opt/openssl</openssl.prefix>

rm -rf hadoop-tools/hadoop-pipes/target

note

Exporting OPENSSL_ROOT_DIR is not enough because of the following profile:

    <profile>
      <id>native</id>
      <activation>
        <activeByDefault>false</activeByDefault>
      </activation>
      <properties>
        <openssl.prefix></openssl.prefix>
      </properties>
      <build>
        <plugins>
          <plugin>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-maven-plugins</artifactId>
            <executions>
              <execution>
                <id>cmake-compile</id>
                <phase>compile</phase>
                <goals><goal>cmake-compile</goal></goals>
                <configuration>
                  <source>${basedir}/src</source>
                  <vars>
                    <JVM_ARCH_DATA_MODEL>${sun.arch.data.model}</JVM_ARCH_DATA_MODEL>
                    <OPENSSL_ROOT_DIR>${openssl.prefix} </OPENSSL_ROOT_DIR>
                  </vars>
                </configuration>
              </execution>
            </executions>
          </plugin>
        </plugins>
      </build>
    </profile>

$openssl.prefix is going to override OPENSSL_ROOT_DIR

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