git checkout -b [name_of_your_new_branch]
- Push the branch on github :
git push origin [name_of_your_new_branch]
- When you want to commit something in your branch, be sure to be in your branch.
#!/bin/bash | |
# Usage: deinterleave_fastq.sh < interleaved.fastq f.fastq r.fastq [compress] | |
# | |
# Deinterleaves a FASTQ file of paired reads into two FASTQ | |
# files specified on the command line. Optionally GZip compresses the output | |
# FASTQ files using pigz if the 3rd command line argument is the word "compress" | |
# | |
# Can deinterleave 100 million paired reads (200 million total | |
# reads; a 43Gbyte file), in memory (/dev/shm), in 4m15s (255s) | |
# |
git checkout -b [name_of_your_new_branch]
git push origin [name_of_your_new_branch]
#!/usr/bin/python3 | |
import sys | |
import os | |
import tempfile | |
import gzip | |
import argparse | |
from ftplib import FTP | |