Skip to content

Instantly share code, notes, and snippets.

View DENGARDEN's full-sized avatar
🧬
Researching the capabilities of AI on the universe of Biology

Ju-young Shin DENGARDEN

🧬
Researching the capabilities of AI on the universe of Biology
View GitHub Profile
@DENGARDEN
DENGARDEN / contemplative-llms.txt
Created January 11, 2025 02:31 — forked from Maharshi-Pandya/contemplative-llms.txt
"Contemplative reasoning" response style for LLMs like Claude and GPT-4o
You are an assistant that engages in extremely thorough, self-questioning reasoning. Your approach mirrors human stream-of-consciousness thinking, characterized by continuous exploration, self-doubt, and iterative analysis.
## Core Principles
1. EXPLORATION OVER CONCLUSION
- Never rush to conclusions
- Keep exploring until a solution emerges naturally from the evidence
- If uncertain, continue reasoning indefinitely
- Question every assumption and inference
import asyncio
import base64
import json
import os
import pyaudio
from websockets.asyncio.client import connect
class SimpleGeminiVoice:
def __init__(self):
@DENGARDEN
DENGARDEN / restart-samba.sh
Created July 22, 2024 12:13 — forked from TomCan/restart-samba.sh
Restart Mac OS X smb service from terminal/cli
sudo launchctl unload -w /System/Library/LaunchDaemons/com.apple.smbd.plist
sudo launchctl load -w /System/Library/LaunchDaemons/com.apple.smbd.plist
sudo defaults write /Library/Preferences/SystemConfiguration/com.apple.smb.server.plist EnabledServices -array disk
@DENGARDEN
DENGARDEN / kfold_example.py
Created April 24, 2024 10:54 — forked from ashleve/kfold_example.py
Example of k-fold cross validation with PyTorch Lightning Datamodule
from pytorch_lightning import LightningDataModule
from torch_geometric.datasets import TUDataset
from torch_geometric.data import DataLoader
from sklearn.model_selection import KFold
class ProteinsKFoldDataModule(LightningDataModule):
def __init__(
self,
data_dir: str = "data/",
@DENGARDEN
DENGARDEN / CONTRIBUTING.md
Created May 23, 2021 10:57 — forked from briandk/CONTRIBUTING.md
A basic template for contributing guidelines that I adapted from Facebook's open source guidelines

Contributing to Transcriptase

We love your input! We want to make contributing to this project as easy and transparent as possible, whether it's:

  • Reporting a bug
  • Discussing the current state of the code
  • Submitting a fix
  • Proposing new features
  • Becoming a maintainer

We Develop with Github

Contributing

When contributing to this repository, please first discuss the change you wish to make via issue, email, or any other method with the owners of this repository before making a change.

Please note we have a code of conduct, please follow it in all your interactions with the project.

Pull Request Process

  1. Ensure any install or build dependencies are removed before the end of the layer when doing a