GenevieveBuckley

from bokeh.plotting import figure, ColumnDataSource
from bokeh.models import HoverTool


def scatter_with_hover(df, x, y,
                       fig=None, cols=None, name=None, marker='x',
                       fig_width=500, fig_height=500, **kwargs):
    """
    Plots an interactive scatter plot of `x` vs `y` using bokeh, with automatic
    tooltips showing columns from `df`.

GenevieveBuckley

Whether you're trying to give back to the open source community or collaborating on your own projects, knowing how to properly fork and generate pull requests is essential. Unfortunately, it's quite easy to make mistakes or not know what you should do when you're initially learning the process. I know that I certainly had considerable initial trouble with it, and I found a lot of the information on GitHub and around the internet to be rather piecemeal and incomplete - part of the process described here, another there, common hangups in a different place, and so on.

In an attempt to coallate this information for myself and others, this short tutorial is what I've found to be fairly standard procedure for creating a fork, doing your work, issuing a pull request, and merging that pull request back into the original project.

Creating a Fork

Just head over to the GitHub page and click the "Fork" button. It's just that simple. Once you've done that, you can use your favorite git client to clone your repo or j

GenevieveBuckley

Desktop

UI Automation. Desktop. Python

GUI toolkit agnostic

autopy - simple, cross-platform GUI automation toolkit. MIT - https://github.com/autopilot-rs/autopy

• GUI toolkit agnostic
• allows you to move mouse, take screenshots, show alerts, search for bitmaps on-screen

GenevieveBuckley

In [1]: from skimage.io import imread as skimage_imread

In [2]: from matplotlib.pyplot import imread as plt_imread

In [3]: from scipy.ndimage import imread as scipy_imread

In [4]: skimage_imread('bulk_water_000.png')
Out[4]:
array([[[146, 125,  54, 255],
        [146, 125,  54, 255],

GenevieveBuckley

Locate the section for your github remote in the .git/config file. It looks like this:

[remote "origin"]
	fetch = +refs/heads/*:refs/remotes/origin/*
	url = git@github.com:joyent/node.git

Now add the line fetch = +refs/pull/*/head:refs/remotes/origin/pr/* to this section. Obviously, change the github url to match your project's URL. It ends up looking like this:

GenevieveBuckley

# https://gist.github.com/althonos/6914b896789d3f2078d1e6237642c35c

[metadata]
name = {name}
version = {version}
author = Martin Larralde
author-email = martin.larralde@ens-paris-saclay.fr
home-page = https://github.com/althonos/{name}
description = {description}
long-description = file: README.rst, CHANGELOG.rst

GenevieveBuckley

import os
import re

from microscopium import io
from microscopium.preprocess import correct_multiimage_illumination
from microscopium.preprocess import find_background_illumination


def main():
    IMAGE_FILE_PATH = "/data/"

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Install

Either copy the aliases from the .gitconfig or run the commands in add-pr-alias.sh

Usage

Easily checkout local copies of pull requests from remotes:

• git pr 4 - creates local branch pr/4 from the github upstream(if it exists) or origin remote and checks it out
• git pr 4 someremote - creates local branch pr/4 from someremote remote and checks it out

GenevieveBuckley

A collapsible section with markdown

Click to expand!

Heading

1. A numbered
2. list
   • With some
   • Sub bullets

GenevieveBuckley

# delete local tag '12345'
git tag -d 12345
# delete remote tag '12345' (eg, GitHub version too)
git push origin :refs/tags/12345
# alternative approach
git push --delete origin tagName
git tag -d tagName