GenevieveBuckley

import sys
import contextlib
@contextlib.contextmanager
def output_wrapper():
    save_stdout = sys.stdout
    save_stderr = sys.stderr
    sys.stdout = open('stdout.log', 'a')
    sys.stderr = open('stderr.log', 'a')
    yield
    sys.stdout = save_stdout

GenevieveBuckley

from contextlib import redirect_stderr
import io
import time
import sys

from tqdm import tqdm
from gooey import Gooey, GooeyParser


@Gooey(progress_regex=r"(\d+)%")

GenevieveBuckley

import argparse


def bar():
    parser = argparse.ArgumentParser()
    parser.add_argument('a')
    parser.add_argument('b')
    parser.add_argument('c')
    args = parser.parse_args()
    return args

GenevieveBuckley

Libraries for a modern geospatial workflow

Distribution

• Writing, Running, and Distributing
• Tox driven development
• Publishing python libraries

Numpy

GenevieveBuckley

repos:
  - repo: https://github.com/ambv/black
    rev: stable
    hooks:
      - id: black
        language_version: python3.7
  - repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v1.2.3
    hooks:
      - id: flake8

GenevieveBuckley

GenevieveBuckley

from io import StringIO


def double():
    x = input("Enter an integer: ")
    return int(x) * 2


def adding():
    x = float(input('Enter the first number'))

GenevieveBuckley

import numpy as np
import matplotlib.pyplot as plt
from matplotlib.widgets import RectangleSelector


def _select_rectangle_callback(eclick, erelease):
    """eclick and erelease are the press and release events"""
    x1, y1 = eclick.xdata, eclick.ydata
    x2, y2 = erelease.xdata, erelease.ydata

GenevieveBuckley

In [60]: microscope.beams.electron_beam.beam_shift.limits
Out[60]: Limits2d(limits_x=Limits(min=-2.0009707e-05,max=2.0009707e-05),limits_y
=Limits(min=-2.0009707e-05,max=2.0009707e-05))

In [61]: microscope.beams.ion_beam.beam_shift.limits
Out[61]: Limits2d(limits_x=Limits(min=-5e-05,max=5e-05),limits_y=Limits(min=-5e-
05,max=5e-05))

GenevieveBuckley

import numpy as np
import matplotlib.pyplot as plt
import numpy as np

from autoscript_sdb_microscope_client import SdbMicroscopeClient
from autoscript_sdb_microscope_client.enumerations import *
from autoscript_sdb_microscope_client.structures import *


def select_point(image):