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JackieMium / deseq-vs-edger.R
Created Oct 10, 2017 — forked from stephenturner/deseq-vs-edger.R
DESeq vs edgeR comparison
View deseq-vs-edger.R
# Note: using the devel versions of both packages!
library(DESeq) # version 1.9.11
library(edgeR) # version 2.99.8
library(VennDiagram)
# Read in data ------------------------------------------------------------
## Use pasilla data
datafile = system.file( "extdata/pasilla_gene_counts.tsv", package="pasilla" )
datafile
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