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#
# Create and reload an image with
# 0 1 2 3 4 5 6 7 8 9 visible
#
from pylab import *
rcParams['font.family'] = 'monospace'
rcParams['font.size'] = 96
rcParams['figure.figsize'] = (20, 4)
rcParams['figure.subplot.top'] = .9
rcParams['figure.subplot.wspace'] = .2
@LeeKamentsky
LeeKamentsky / gist:11eb5d9ad099622dc7d1
Created September 23, 2015 20:31
Mac selection snippet
if sys.platform != 'darwin':
wx.RendererNative.Get().DrawItemSelectionRect(
window, dc, rect, flags)
elif flags & wx.CONTROL_SELECTED:
if flags & wx.CONTROL_FOCUSED:
color = wx.SystemSettings.GetColour(wx.SYS_COLOUR_HIGHLIGHT)
else:
color = wx.SystemSettings.GetColour(wx.SYS_COLOUR_INACTIVECAPTION)
old_brush = dc.Brush
new_brush = wx.Brush(color)
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@LeeKamentsky
LeeKamentsky / install_on_windows.txt
Last active December 27, 2015 23:54
Install CellProfiler dev on Windows
Install Microsoft SDK for Windows 7
Install JDK 8 64-bit
Install Python 2.7
Install Git for Windows (and choose the option that lets you run git from the Windows command-line)
Install CMake (https://cmake.org/download) (choose the option to aqdd CMake to the system PATH for current user)
pip install --upgrade pip
pip install virtualenv
#
# The wheels (.whl) from Christoph Gohlke's site can be installed like this:
# pip install c:/Users/<me>/Downloads/mywheel_amd64.whl
@LeeKamentsky
LeeKamentsky / ASCIICP.txt
Created November 25, 2015 13:14
ASCII art rendition of CP logo
oMMy
+++++++++++++++++++++++++++++++++++++hMMd++++++++++++++++++++++++++++++++++++++++++++++++++++:
MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMh
MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMh
MMMsooooooooooohMMMNNMMMMMMMmdyyhyhhhmMMmhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhdddMMMMMMMMMMh
MMM:-----------oMMMh+sdNMMMMMNdhsoooohMMdoooooooooooooooooooooooooooosssssssssssyyhMMMMMMMMMMh
MMM/-----------oMMMh/:/+sdNMMMMMNNdyshMMdoooooooooooooooooooooooooooosssssssssssyyhMMMMMMMMMMh
MMM/-----------:hMMd/:-:::/ohmNMMMMMNNMMmsooooooooooooooooooooooooooosssssssssssyyhMMMMMMMMMMh
MMM/::::::::::::hMMd/:---::::/+shdNMMMMMMNmdyyooooooooooooooooooooooosssssssssssyyhMMMMMMMMMMh
MMM/::::::::::::hMMd/-----:::::://+oyhmNNMMMMMNNdhhssoooooooooooooooosssssssssssyyhMMMMMMMMMMh
@LeeKamentsky
LeeKamentsky / kirsch.py
Created November 25, 2015 15:50
Kirsch
def rotate(direction, index):
return direction[-index:] + direction[:-index]
def make_kernel(convolution_mask):
k = list(convolution_mask)
k.insert(4, 0)
return np.array(k).reshape(3, 3)
def kirsch(img):
convolution_mask = [5, -3, -3, -3, -3, -3, 5, 5]
@LeeKamentsky
LeeKamentsky / AQLM_2016.ipynb
Last active November 28, 2016 15:57
AQLM 2016 presentation on image analysis
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