Created
November 21, 2015 13:48
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Enzyme commands
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| ./digester.pl -e t all_orf_pred_peptides.fasta > all_orf_pred_peptides_fixed_trypsin.fasta; | |
| ./digester.pl -e k all_orf_pred_peptides.fasta > all_orf_pred_peptides_fixed_lys_c.fasta; | |
| ./digester.pl -e r all_orf_pred_peptides.fasta > all_orf_pred_peptides_fixed_arg_c.fasta; | |
| ./digester.pl -e e all_orf_pred_peptides.fasta > all_orf_pred_peptides_fixed_glu_c.fasta; |
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| wc -l all_orf_pred_peptides* | |
| 24411 all_orf_pred_peptides.fasta | |
| 39009 all_orf_pred_peptides_fixed_arg_c.fasta | |
| 86271 all_orf_pred_peptides_fixed.fasta | |
| 49836 all_orf_pred_peptides_fixed_glu_c.fasta | |
| 48154 all_orf_pred_peptides_fixed_lys_c.fasta | |
| 86271 all_orf_pred_peptides_fixed_trypsin.fasta | |
| 20097 all_orf_pred_peptides_no_headers.fasta | |
| 354049 total |
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