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@TomHarrop
Created July 23, 2017 08:55
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r on macOS 10.12.6 - Homebrew build logs
Homebrew build logs for r on macOS 10.12.6
Build date: 2017-07-23 20:38:57
HOMEBREW_VERSION: 1.2.4
ORIGIN: https://github.com/Homebrew/brew
HEAD: b5529084906af89827f6d9befd613457a1615918
Last commit: 3 weeks ago
Core tap ORIGIN: https://github.com/Homebrew/homebrew-core
Core tap HEAD: ab605428c841df83ca9e5efa06f66661f4f4535e
Core tap last commit: 30 minutes ago
HOMEBREW_PREFIX: /usr/local
HOMEBREW_REPOSITORY: /usr/local/Homebrew
HOMEBREW_CELLAR: /usr/local/Cellar
HOMEBREW_BOTTLE_DOMAIN: https://homebrew.bintray.com
CPU: octa-core 64-bit haswell
Homebrew Ruby: 2.0.0-p648
Clang: 8.1 build 802
Git: 2.11.0 => /Library/Developer/CommandLineTools/usr/bin/git
Perl: /usr/bin/perl
Python: /usr/bin/python
Ruby: /usr/bin/ruby => /System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/bin/ruby
Java: 1.8.0_141
macOS: 10.12.6-x86_64
Xcode: N/A
CLT: 8.3.2.0.1.1492020469
X11: N/A
Your system is ready to brew.
2017-07-23 20:38:52 +1200
./configure
--prefix=/usr/local/Cellar/r/3.4.1_1
--enable-memory-profiling
--without-cairo
--without-x
--with-aqua
--with-lapack
--enable-R-shlib
SED=/usr/bin/sed
--with-blas=-framework Accelerate
--enable-java
checking build system type... x86_64-apple-darwin16.7.0
checking host system type... x86_64-apple-darwin16.7.0
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for working aclocal... missing
checking for working autoconf... missing
checking for working automake... missing
checking for working autoheader... missing
checking whether ln -s works... yes
checking for bison... bison -y
checking for ar... ar
checking for a BSD-compatible install... /usr/bin/install -c
checking for sed... /usr/bin/sed
checking for which... /usr/bin/which
checking for less... /usr/bin/less
checking for gtar... no
checking for gnutar... no
checking for tar... /usr/bin/tar
checking for tex... no
checking for pdftex... no
configure: WARNING: you cannot build PDF versions of the R manuals
checking for pdflatex... no
configure: WARNING: you cannot build PDF versions of vignettes and help pages
checking for makeindex... no
checking for texi2any... no
configure: WARNING: you cannot build info or HTML versions of the R manuals
checking for texi2dvi... /usr/bin/texi2dvi
checking for kpsewhich... no
checking for latex inconsolata package... checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for gzip... /usr/bin/gzip
checking for bzip2... /usr/bin/bzip2
checking for firefox... no
checking for mozilla... no
checking for galeon... no
checking for opera... no
checking for xdg-open... no
checking for kfmclient... no
checking for gnome-moz-remote... no
checking for open... /usr/bin/open
using default browser ... /usr/bin/open
checking for acroread... no
checking for acroread4... no
checking for xdg-open... no
checking for evince... no
checking for xpdf... no
checking for gv... no
checking for gnome-gv... no
checking for ggv... no
checking for okular... no
checking for kpdf... no
checking for open... /usr/bin/open
checking for notangle... false
checking for realpath... false
checking for pkg-config... /usr/local/opt/pkg-config/bin/pkg-config
checking for gcc... clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking how to run the C preprocessor... clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking whether clang needs -traditional... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking how to run the C preprocessor... clang -E
defining F77 to be /usr/local/bin/gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether /usr/local/bin/gfortran accepts -g... yes
checking whether we are using the GNU C++ compiler... yes
checking whether clang++ accepts -g... yes
checking whether clang++ -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin can compile C++ code... yes
checking how to run the C++ preprocessor... clang++ -E
checking whether __attribute__((visibility())) is supported... no
checking whether clang accepts -fvisibility... yes
checking whether /usr/local/bin/gfortran accepts -fvisibility... yes
checking whether we are using the GNU Objective C compiler... yes
checking whether clang accepts -g... yes
checking for Objective C++ compiler... trying some possibilities
checking whether clang++ can compile ObjC++... yes
clang++
checking how to print strings... printf
checking for a sed that does not truncate output... (cached) /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by clang... /Library/Developer/CommandLineTools/usr/bin/ld
checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin16.7.0 file names to x86_64-apple-darwin16.7.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin16.7.0 file names to toolchain format... func_convert_file_noop
checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking command to parse /usr/bin/nm -B output from clang object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking for dlfcn.h...
clang called with: --version
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native --version -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -v
superenv executed: clang -v
clang called with: -V
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -V -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -qversion
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -qversion -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -g -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -g -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -v
superenv executed: clang -v
clang++ called with: --version
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang++ -pipe -Os -march=native --version -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang++ called with: -v
superenv executed: clang++ -v
clang++ called with: -V
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang++ -pipe -Os -march=native -V -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang++ called with: -qversion
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang++ -pipe -Os -march=native -qversion -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang++ called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang++ -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang++ called with: -c -g -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang++ -pipe -Os -march=native -c -g -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang++ called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang++ -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang++ called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang++ -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang++ called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang++ -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang++ called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang++ -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang++ called with: -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
superenv added: -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang++ -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -Werror -S conftest.c -o conftest.s
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -Werror -S conftest.c -o conftest.s -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -fvisibility=hidden -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -fvisibility=hidden -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: --version
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native --version -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -v
superenv executed: clang -v
clang called with: -V
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -V -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -qversion
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -qversion -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.m
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.m -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -g -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.m
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -g -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.m -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang++ called with: -c conftest.mm -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang++ -pipe -Os -march=native -c conftest.mm -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -print-prog-name=ld
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -print-prog-name=ld -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
superenv executed: clang -pipe -Os -march=native -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c conftstm.o
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c conftstm.o -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -Wl,-exported_symbols_list,conftest.sym conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -Wl,-exported_symbols_list,conftest.sym conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
clang called with: -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -c -o conftest.o conftest.c
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
superenv executed: clang -pipe -Os -march=native -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -c -o conftest.o conftest.c -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include
clang called with: -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -o conftest conftest.c -Wl,-force_load,./libconftest.a
superenv added: -pipe -Os -march=native -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
superenv executed: clang -pipe -Os -march=native -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -o conftest conftest.c -Wl,-force_load,./libconftest.a -isystem/usr/local/include -isystem/usr/include/libxml2 -isystem/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries -Wl,-headerpad_max_install_names
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by R configure 3.4.1, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ./configure --prefix=/usr/local/Cellar/r/3.4.1_1 --enable-memory-profiling --without-cairo --without-x --with-aqua --with-lapack --enable-R-shlib SED=/usr/bin/sed --with-blas=-framework Accelerate --enable-java
## --------- ##
## Platform. ##
## --------- ##
hostname = godbolt.yuri
uname -m = x86_64
uname -r = 16.7.0
uname -s = Darwin
uname -v = Darwin Kernel Version 16.7.0: Thu Jun 15 17:36:27 PDT 2017; root:xnu-3789.70.16~2/RELEASE_X86_64
/usr/bin/uname -p = i386
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 16.7.0: Thu Jun 15 17:36:27 PDT 2017; root:xnu-3789.70.16~2/RELEASE_X86_64
Kernel configured for up to 8 processors.
4 processors are physically available.
8 processors are logically available.
Processor type: x86_64h (Intel x86-64h Haswell)
Processors active: 0 1 2 3 4 5 6 7
Primary memory available: 32.00 gigabytes
Default processor set: 230 tasks, 871 threads, 8 processors
Load average: 1.88, Mach factor: 6.11
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/bin
PATH: /usr/local/Homebrew/Library/Homebrew/shims/super
PATH: /usr/local/opt/pkg-config/bin
PATH: /usr/local/opt/gettext/bin
PATH: /usr/local/opt/jpeg/bin
PATH: /usr/local/opt/libpng/bin
PATH: /usr/local/opt/pcre/bin
PATH: /usr/local/opt/xz/bin
PATH: /usr/local/opt/gcc/bin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
PATH: /usr/local/Cellar/gcc/7.1.0/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:3640: checking build system type
configure:3654: result: x86_64-apple-darwin16.7.0
configure:3674: checking host system type
configure:3687: result: x86_64-apple-darwin16.7.0
configure:4385: checking for pwd
configure:4403: found /bin/pwd
configure:4416: result: /bin/pwd
configure:4424: checking whether builddir is srcdir
configure:4432: result: yes
configure:4437: checking for working aclocal
configure:4445: result: missing
configure:4450: checking for working autoconf
configure:4458: result: missing
configure:4463: checking for working automake
configure:4471: result: missing
configure:4476: checking for working autoheader
configure:4484: result: missing
configure:4489: checking whether ln -s works
configure:4493: result: yes
configure:4504: checking for bison
configure:4520: found /usr/bin/bison
configure:4531: result: bison -y
configure:4547: checking for ar
configure:4563: found /usr/bin/ar
configure:4574: result: ar
configure:4602: checking for a BSD-compatible install
configure:4670: result: /usr/bin/install -c
configure:4705: checking for sed
configure:4736: result: /usr/bin/sed
configure:4754: checking for which
configure:4772: found /usr/bin/which
configure:4784: result: /usr/bin/which
configure:4804: checking for less
configure:4822: found /usr/bin/less
configure:4834: result: /usr/bin/less
configure:4857: checking for gtar
configure:4890: result: no
configure:4857: checking for gnutar
configure:4890: result: no
configure:4857: checking for tar
configure:4875: found /usr/bin/tar
configure:4887: result: /usr/bin/tar
configure:4909: checking for tex
configure:4942: result: no
configure:4954: checking for pdftex
configure:4987: result: no
configure:4997: WARNING: you cannot build PDF versions of the R manuals
configure:5004: checking for pdflatex
configure:5037: result: no
configure:5047: WARNING: you cannot build PDF versions of vignettes and help pages
configure:5054: checking for makeindex
configure:5087: result: no
configure:5099: checking for texi2any
configure:5132: result: no
configure:5221: WARNING: you cannot build info or HTML versions of the R manuals
configure:5232: checking for texi2dvi
configure:5250: found /usr/bin/texi2dvi
configure:5262: result: /usr/bin/texi2dvi
configure:5282: checking for kpsewhich
configure:5315: result: no
configure:5324: checking for latex inconsolata package
configure:5357: checking for unzip
configure:5375: found /usr/bin/unzip
configure:5387: result: /usr/bin/unzip
configure:5403: checking for zip
configure:5421: found /usr/bin/zip
configure:5433: result: /usr/bin/zip
configure:5449: checking for gzip
configure:5467: found /usr/bin/gzip
configure:5479: result: /usr/bin/gzip
configure:5495: checking for bzip2
configure:5513: found /usr/bin/bzip2
configure:5525: result: /usr/bin/bzip2
configure:5543: checking for firefox
configure:5576: result: no
configure:5543: checking for mozilla
configure:5576: result: no
configure:5543: checking for galeon
configure:5576: result: no
configure:5543: checking for opera
configure:5576: result: no
configure:5543: checking for xdg-open
configure:5576: result: no
configure:5543: checking for kfmclient
configure:5576: result: no
configure:5543: checking for gnome-moz-remote
configure:5576: result: no
configure:5543: checking for open
configure:5561: found /usr/bin/open
configure:5573: result: /usr/bin/open
configure:5590: result: using default browser ... /usr/bin/open
configure:5600: checking for acroread
configure:5633: result: no
configure:5600: checking for acroread4
configure:5633: result: no
configure:5600: checking for xdg-open
configure:5633: result: no
configure:5600: checking for evince
configure:5633: result: no
configure:5600: checking for xpdf
configure:5633: result: no
configure:5600: checking for gv
configure:5633: result: no
configure:5600: checking for gnome-gv
configure:5633: result: no
configure:5600: checking for ggv
configure:5633: result: no
configure:5600: checking for okular
configure:5633: result: no
configure:5600: checking for kpdf
configure:5633: result: no
configure:5600: checking for open
configure:5618: found /usr/bin/open
configure:5630: result: /usr/bin/open
configure:5651: checking for notangle
configure:5682: result: false
configure:5698: checking for realpath
configure:5729: result: false
configure:5743: checking for pkg-config
configure:5762: found /usr/local/opt/pkg-config/bin/pkg-config
configure:5774: result: /usr/local/opt/pkg-config/bin/pkg-config
configure:5834: checking for gcc
configure:5861: result: clang
configure:6090: checking for C compiler version
configure:6099: clang --version >&5
Apple LLVM version 8.1.0 (clang-802.0.42)
Target: x86_64-apple-darwin16.7.0
Thread model: posix
InstalledDir: /Library/Developer/CommandLineTools/usr/bin
configure:6110: $? = 0
configure:6099: clang -v >&5
Apple LLVM version 8.1.0 (clang-802.0.42)
Target: x86_64-apple-darwin16.7.0
Thread model: posix
InstalledDir: /Library/Developer/CommandLineTools/usr/bin
configure:6110: $? = 0
configure:6099: clang -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
configure:6110: $? = 1
configure:6099: clang -qversion >&5
clang: error: unknown argument: '-qversion'
configure:6110: $? = 1
configure:6130: checking whether the C compiler works
configure:6152: clang -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c >&5
configure:6156: $? = 0
configure:6204: result: yes
configure:6207: checking for C compiler default output file name
configure:6209: result: a.out
configure:6215: checking for suffix of executables
configure:6222: clang -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c >&5
configure:6226: $? = 0
configure:6248: result:
configure:6270: checking whether we are cross compiling
configure:6278: clang -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c >&5
configure:6282: $? = 0
configure:6289: ./conftest
configure:6293: $? = 0
configure:6308: result: no
configure:6313: checking for suffix of object files
configure:6335: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:6339: $? = 0
configure:6360: result: o
configure:6364: checking whether we are using the GNU C compiler
configure:6383: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:6383: $? = 0
configure:6392: result: yes
configure:6401: checking whether clang accepts -g
configure:6421: clang -c -g -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:6421: $? = 0
configure:6462: result: yes
configure:6479: checking for clang option to accept ISO C89
configure:6542: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:6542: $? = 0
configure:6555: result: none needed
configure:6581: checking how to run the C preprocessor
configure:6612: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
configure:6612: $? = 0
configure:6626: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6626: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.4.1"
| #define PACKAGE_STRING "R 3.4.1"
| #define PACKAGE_BUGREPORT "https://bugs.r-project.org"
| #define PACKAGE_URL "https://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.4.1"
| #define R_PLATFORM "x86_64-apple-darwin16.7.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin16.7.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6651: result: clang -E
configure:6671: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
configure:6671: $? = 0
configure:6685: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6685: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.4.1"
| #define PACKAGE_STRING "R 3.4.1"
| #define PACKAGE_BUGREPORT "https://bugs.r-project.org"
| #define PACKAGE_URL "https://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.4.1"
| #define R_PLATFORM "x86_64-apple-darwin16.7.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin16.7.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6714: checking for grep that handles long lines and -e
configure:6772: result: /usr/bin/grep
configure:6777: checking for egrep
configure:6839: result: /usr/bin/grep -E
configure:6845: checking whether clang needs -traditional
conftest.c:17:10: fatal error: 'termio.h' file not found
#include <termio.h>
^
1 error generated.
configure:6879: result: no
configure:6886: checking for ANSI C header files
configure:6906: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:6906: $? = 0
configure:6979: clang -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c >&5
configure:6979: $? = 0
configure:6979: ./conftest
configure:6979: $? = 0
configure:6990: result: yes
configure:7003: checking for sys/types.h
configure:7003: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:7003: $? = 0
configure:7003: result: yes
configure:7003: checking for sys/stat.h
configure:7003: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:7003: $? = 0
configure:7003: result: yes
configure:7003: checking for stdlib.h
configure:7003: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:7003: $? = 0
configure:7003: result: yes
configure:7003: checking for string.h
configure:7003: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:7003: $? = 0
configure:7003: result: yes
configure:7003: checking for memory.h
configure:7003: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:7003: $? = 0
configure:7003: result: yes
configure:7003: checking for strings.h
configure:7003: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:7003: $? = 0
configure:7003: result: yes
configure:7003: checking for inttypes.h
configure:7003: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:7003: $? = 0
configure:7003: result: yes
configure:7003: checking for stdint.h
configure:7003: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:7003: $? = 0
configure:7003: result: yes
configure:7003: checking for unistd.h
configure:7003: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:7003: $? = 0
configure:7003: result: yes
configure:7016: checking minix/config.h usability
configure:7016: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
conftest.c:60:10: fatal error: 'minix/config.h' file not found
#include <minix/config.h>
^
1 error generated.
configure:7016: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.4.1"
| #define PACKAGE_STRING "R 3.4.1"
| #define PACKAGE_BUGREPORT "https://bugs.r-project.org"
| #define PACKAGE_URL "https://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.4.1"
| #define R_PLATFORM "x86_64-apple-darwin16.7.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin16.7.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <minix/config.h>
configure:7016: result: no
configure:7016: checking minix/config.h presence
configure:7016: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
conftest.c:27:10: fatal error: 'minix/config.h' file not found
#include <minix/config.h>
^
1 error generated.
configure:7016: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.4.1"
| #define PACKAGE_STRING "R 3.4.1"
| #define PACKAGE_BUGREPORT "https://bugs.r-project.org"
| #define PACKAGE_URL "https://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.4.1"
| #define R_PLATFORM "x86_64-apple-darwin16.7.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin16.7.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <minix/config.h>
configure:7016: result: no
configure:7016: checking for minix/config.h
configure:7016: result: no
configure:7037: checking whether it is safe to define __EXTENSIONS__
configure:7055: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:7055: $? = 0
configure:7062: result: yes
configure:7083: checking how to run the C preprocessor
configure:7153: result: clang -E
configure:7173: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
configure:7173: $? = 0
configure:7187: clang -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c
conftest.c:32:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7187: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.4.1"
| #define PACKAGE_STRING "R 3.4.1"
| #define PACKAGE_BUGREPORT "https://bugs.r-project.org"
| #define PACKAGE_URL "https://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.4.1"
| #define R_PLATFORM "x86_64-apple-darwin16.7.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin16.7.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7260: result: defining F77 to be /usr/local/bin/gfortran
configure:7432: checking for Fortran 77 compiler version
configure:7441: /usr/local/bin/gfortran --version >&5
GNU Fortran (Homebrew GCC 7.1.0) 7.1.0
Copyright (C) 2017 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:7452: $? = 0
configure:7441: /usr/local/bin/gfortran -v >&5
Using built-in specs.
COLLECT_GCC=/usr/local/bin/gfortran
COLLECT_LTO_WRAPPER=/usr/local/Cellar/gcc/7.1.0/libexec/gcc/x86_64-apple-darwin16.5.0/7.1.0/lto-wrapper
Target: x86_64-apple-darwin16.5.0
Configured with: ../configure --build=x86_64-apple-darwin16.5.0 --prefix=/usr/local/Cellar/gcc/7.1.0 --libdir=/usr/local/Cellar/gcc/7.1.0/lib/gcc/7 --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-7 --with-gmp=/usr/local/opt/gmp --with-mpfr=/usr/local/opt/mpfr --with-mpc=/usr/local/opt/libmpc --with-isl=/usr/local/opt/isl --with-system-zlib --enable-checking=release --with-pkgversion='Homebrew GCC 7.1.0' --with-bugurl=https://github.com/Homebrew/homebrew-core/issues --disable-nls
Thread model: posix
gcc version 7.1.0 (Homebrew GCC 7.1.0)
configure:7452: $? = 0
configure:7441: /usr/local/bin/gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:7452: $? = 1
configure:7441: /usr/local/bin/gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'; did you mean '--version'?
gfortran: fatal error: no input files
compilation terminated.
configure:7452: $? = 1
configure:7461: checking whether we are using the GNU Fortran 77 compiler
configure:7474: /usr/local/bin/gfortran -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin conftest.F >&5
configure:7474: $? = 0
configure:7483: result: yes
configure:7489: checking whether /usr/local/bin/gfortran accepts -g
configure:7500: /usr/local/bin/gfortran -c -g conftest.f >&5
configure:7500: $? = 0
configure:7508: result: yes
configure:7654: checking for C++ compiler version
configure:7663: clang++ --version >&5
Apple LLVM version 8.1.0 (clang-802.0.42)
Target: x86_64-apple-darwin16.7.0
Thread model: posix
InstalledDir: /Library/Developer/CommandLineTools/usr/bin
configure:7674: $? = 0
configure:7663: clang++ -v >&5
Apple LLVM version 8.1.0 (clang-802.0.42)
Target: x86_64-apple-darwin16.7.0
Thread model: posix
InstalledDir: /Library/Developer/CommandLineTools/usr/bin
configure:7674: $? = 0
configure:7663: clang++ -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
configure:7674: $? = 1
configure:7663: clang++ -qversion >&5
clang: error: unknown argument: '-qversion'
configure:7674: $? = 1
configure:7678: checking whether we are using the GNU C++ compiler
configure:7697: clang++ -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp >&5
configure:7697: $? = 0
configure:7706: result: yes
configure:7715: checking whether clang++ accepts -g
configure:7735: clang++ -c -g -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp >&5
configure:7735: $? = 0
configure:7776: result: yes
configure:7801: checking whether clang++ -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin can compile C++ code
configure:7821: clang++ -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp >&5
configure:7821: $? = 0
configure:7835: result: yes
configure:7851: checking how to run the C++ preprocessor
configure:7878: clang++ -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
configure:7878: $? = 0
configure:7892: clang++ -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
conftest.cpp:32:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7892: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.4.1"
| #define PACKAGE_STRING "R 3.4.1"
| #define PACKAGE_BUGREPORT "https://bugs.r-project.org"
| #define PACKAGE_URL "https://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.4.1"
| #define R_PLATFORM "x86_64-apple-darwin16.7.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin16.7.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7917: result: clang++ -E
configure:7937: clang++ -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
configure:7937: $? = 0
configure:7951: clang++ -E -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.cpp
conftest.cpp:32:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7951: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.4.1"
| #define PACKAGE_STRING "R 3.4.1"
| #define PACKAGE_BUGREPORT "https://bugs.r-project.org"
| #define PACKAGE_URL "https://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.4.1"
| #define R_PLATFORM "x86_64-apple-darwin16.7.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin16.7.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7986: checking whether __attribute__((visibility())) is supported
configure:8000: clang -Werror -S conftest.c -o conftest.s 1>&5
clang: error: -Wl,-headerpad_max_install_names: 'linker' input unused [-Werror,-Wunused-command-line-argument]
configure:8003: $? = 1
configure:8012: result: no
configure:8023: checking whether clang accepts -fvisibility
configure:8039: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -fvisibility=hidden -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:8039: $? = 0
configure:8046: result: yes
configure:8071: checking whether /usr/local/bin/gfortran accepts -fvisibility
configure:8081: /usr/local/bin/gfortran -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -fvisibility=hidden conftest.f >&5
configure:8081: $? = 0
configure:8088: result: yes
configure:8218: checking for Objective C compiler version
configure:8227: clang --version >&5
Apple LLVM version 8.1.0 (clang-802.0.42)
Target: x86_64-apple-darwin16.7.0
Thread model: posix
InstalledDir: /Library/Developer/CommandLineTools/usr/bin
configure:8238: $? = 0
configure:8227: clang -v >&5
Apple LLVM version 8.1.0 (clang-802.0.42)
Target: x86_64-apple-darwin16.7.0
Thread model: posix
InstalledDir: /Library/Developer/CommandLineTools/usr/bin
configure:8238: $? = 0
configure:8227: clang -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
configure:8238: $? = 1
configure:8227: clang -qversion >&5
clang: error: unknown argument: '-qversion'
configure:8238: $? = 1
configure:8242: checking whether we are using the GNU Objective C compiler
configure:8261: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.m >&5
configure:8261: $? = 0
configure:8270: result: yes
configure:8279: checking whether clang accepts -g
configure:8299: clang -c -g -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.m >&5
configure:8299: $? = 0
configure:8340: result: yes
configure:8399: checking for Objective C++ compiler
configure:8405: result: trying some possibilities
configure:8408: checking whether clang++ can compile ObjC++
running: clang++ -c conftest.mm -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin
configure:8436: result: yes
configure:8540: result: clang++
configure:8630: checking how to print strings
configure:8657: result: printf
configure:8678: checking for a sed that does not truncate output
configure:8742: result: /usr/bin/sed
configure:8760: checking for fgrep
configure:8822: result: /usr/bin/grep -F
configure:8857: checking for ld used by clang
configure:8924: result: /Library/Developer/CommandLineTools/usr/bin/ld
configure:8931: checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld
configure:8946: result: no
configure:8958: checking for BSD- or MS-compatible name lister (nm)
configure:9012: result: /usr/bin/nm -B
configure:9142: checking the name lister (/usr/bin/nm -B) interface
configure:9149: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:9152: /usr/bin/nm -B "conftest.o"
configure:9155: output
0000000000000000 S _some_variable
configure:9162: result: BSD nm
configure:9166: checking the maximum length of command line arguments
configure:9297: result: 196608
configure:9345: checking how to convert x86_64-apple-darwin16.7.0 file names to x86_64-apple-darwin16.7.0 format
configure:9385: result: func_convert_file_noop
configure:9392: checking how to convert x86_64-apple-darwin16.7.0 file names to toolchain format
configure:9412: result: func_convert_file_noop
configure:9419: checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files
configure:9426: result: -r
configure:9500: checking for objdump
configure:9516: found /usr/bin/objdump
configure:9527: result: objdump
configure:9559: checking how to recognize dependent libraries
configure:9759: result: pass_all
configure:9844: checking for dlltool
configure:9874: result: no
configure:9904: checking how to associate runtime and link libraries
configure:9931: result: printf %s\n
configure:10055: checking for archiver @FILE support
configure:10072: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:10072: $? = 0
configure:10075: ar cru libconftest.a @conftest.lst >&5
ar: @conftest.lst: No such file or directory
configure:10078: $? = 1
configure:10098: result: no
configure:10156: checking for strip
configure:10172: found /usr/bin/strip
configure:10183: result: strip
configure:10255: checking for ranlib
configure:10271: found /usr/bin/ranlib
configure:10282: result: ranlib
configure:10359: checking for gawk
configure:10389: result: no
configure:10359: checking for mawk
configure:10389: result: no
configure:10359: checking for nawk
configure:10389: result: no
configure:10359: checking for awk
configure:10375: found /usr/bin/awk
configure:10386: result: awk
configure:10426: checking command to parse /usr/bin/nm -B output from clang object
configure:10579: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:10582: $? = 0
configure:10586: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
configure:10589: $? = 0
cannot find nm_test_var in conftest.nm
configure:10579: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
configure:10582: $? = 0
configure:10586: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
configure:10589: $? = 0
configure:10655: clang -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib conftest.c conftstm.o >&5
configure:10658: $? = 0
configure:10696: result: ok
configure:10743: checking for sysroot
configure:10773: result: no
configure:10780: checking for a working dd
configure:10818: result: /bin/dd
configure:10822: checking how to truncate binary pipes
configure:10837: result: /bin/dd bs=4096 count=1
configure:11166: checking for mt
configure:11196: result: no
configure:11216: checking if : is a manifest tool
configure:11222: : '-?'
configure:11230: result: no
configure:11286: checking for dsymutil
configure:11302: found /usr/bin/dsymutil
configure:11313: result: dsymutil
configure:11378: checking for nmedit
configure:11394: found /usr/bin/nmedit
configure:11405: result: nmedit
configure:11470: checking for lipo
configure:11486: found /usr/bin/lipo
configure:11497: result: lipo
configure:11562: checking for otool
configure:11578: found /usr/bin/otool
configure:11589: result: otool
configure:11654: checking for otool64
configure:11684: result: no
configure:11729: checking for -single_module linker flag
clang -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
configure:11762: result: yes
configure:11765: checking for -exported_symbols_list linker flag
configure:11785: clang -o conftest -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -Wl,-exported_symbols_list,conftest.sym conftest.c >&5
configure:11785: $? = 0
configure:11795: result: yes
configure:11798: checking for -force_load linker flag
clang -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -c -o conftest.o conftest.c
ar cru libconftest.a conftest.o
ranlib libconftest.a
clang -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -L/usr/local/opt/gettext/lib -L/usr/local/opt/readline/lib -o conftest conftest.c -Wl,-force_load,./libconftest.a
configure:11830: result: yes
configure:11904: checking for dlfcn.h
configure:11904: clang -c -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_141.jdk/Contents/Home/include/darwin -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include conftest.c >&5
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