View gsquantify2018.py
import numpy as np | |
inp = input() | |
u0,kappa,ita,nu,S,n,K = map(float,inp) | |
num_sims = S | |
t_init = 0.0 | |
t_end = 10.0 | |
N = n*10 |
View Localsaparamestim1variable.ipynb

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View Localsensitivitygradcont.ipynb

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View localsensitivitygradient.ipynb

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View multipleshooting.ipynb

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View gist:c8f3147d7c5de3b0f1f68a64f6dd1fa5
{ | |
"cells": [ | |
{ | |
"cell_type": "code", | |
"execution_count": 1, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stderr", | |
"output_type": "stream", |
View JuliaCon.ipynb

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View diffeqhmc.jl
# DiffEq tools | |
using DiffEqBayes, OrdinaryDiffEq, ParameterizedFunctions, RecursiveArrayTools | |
# clone from github.com/tpapp | |
using DynamicHMC, MCMCDiagnostics, DiffWrappers, ContinuousTransformations | |
using Parameters, Distributions, Optim | |
f1 = @ode_def_nohes LotkaVolterraTest1 begin | |
dx = a*x - b*x*y |