-
Download and unzip FIJI, move the
FiJji.app
folder toC:\Users\Public\Downloads\
-
Install BaSiC by following the instructions under the Install via the Fiji Updater section on this page
-
Save the
imagej_basic_ashlar.py
toC:\Users\Public\Downloads\Fiji.app\plugins\
-
Launch command prompt
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import argparse | |
import json | |
import sys | |
from omero.gateway import BlitzGateway | |
from omero.cli import cli_login | |
from omero.model import StatsInfoI | |
from omero.rtypes import rdouble |
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# Requirements: | |
# hdf5>=1.10.5 | |
# h5py>=3.0 | |
# conda install -c conda-forge hdf5 h5py | |
import logging | |
from urllib.parse import urlparse, urlunparse | |
import numpy as np | |
import h5py | |
import zarr |
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javascript:(function(){ | |
let infotab = document.getElementById('infoTab').children[0].children[2]; | |
let channels = infotab.children[0].children[1].children[0].lastElementChild.textContent.trim().split(', '); | |
let channelsliders = document.getElementById('channel_sliders').children[0]; | |
for(i=0;i<channels.length;i++) { | |
let p = document.createTextNode(channels[i]); | |
let br = document.createElement('br'); | |
channelsliders.children[i].insertBefore(br,channelsliders.children[i].firstChild); | |
channelsliders.children[i].insertBefore(p,channelsliders.children[i].firstChild); | |
} |
You can't just follow the directions on the site, you have to do some mojo first.
sudo apt-get update