mikerourke

Installing Yarn in Cloud9

You can't just follow the directions on the site, you have to do some mojo first.

Step 1. Run update.

sudo apt-get update

Step 2. Install apt-transport-https.

Yu-AnChen

Exemplar - run ASHLAR on demo data with the batch script

1. Download and unzip FIJI, move the FiJji.app folder to C:\Users\Public\Downloads\

2. Install BaSiC by following the instructions under the Install via the Fiji Updater section on this page

3. Save the imagej_basic_ashlar.py to C:\Users\Public\Downloads\Fiji.app\plugins\

4. Launch command prompt

mikrkilk

javascript:(function(){
 let infotab = document.getElementById('infoTab').children[0].children[2];
 let channels = infotab.children[0].children[1].children[0].lastElementChild.textContent.trim().split(', ');
 let channelsliders = document.getElementById('channel_sliders').children[0];
 for(i=0;i<channels.length;i++) {
     let p = document.createTextNode(channels[i]);
     let br = document.createElement('br');
     channelsliders.children[i].insertBefore(br,channelsliders.children[i].firstChild);
     channelsliders.children[i].insertBefore(p,channelsliders.children[i].firstChild);
 }

rsignell-usgs

# Requirements:
# hdf5>=1.10.5
# h5py>=3.0
# conda install -c conda-forge hdf5 h5py

import logging
from urllib.parse import urlparse, urlunparse
import numpy as np
import h5py
import zarr

will-moore

import argparse
import json
import sys

from omero.gateway import BlitzGateway
from omero.cli import cli_login
from omero.model import StatsInfoI
from omero.rtypes import rdouble