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@arogozhnikov
arogozhnikov / edgedb_feedback.markdown
Last active August 23, 2023 19:08
Edgedb feedback, comparison of edgedb vs sqlmodel/sqlalchemy

Notes on edgedb

I’ve made a test evaluation of edgedb for the purposes of a small company.

My order of priorities (starting from most important):

  1. correctness of results (data and code)
  2. developer convenience
  3. minimal maintenance
  4. efficiency/scalability
@geerlingguy
geerlingguy / arducam-hawk-eye-setup.sh
Last active December 9, 2023 17:23
ArduCam Hawk-Eye 64MP camera setup
# Download the pivariety driver install script and make it executable
wget -O install_pivariety_pkgs.sh https://github.com/ArduCAM/Arducam-Pivariety-V4L2-Driver/releases/download/install_script/install_pivariety_pkgs.sh
chmod +x install_pivariety_pkgs.sh
# Install libcamera dev and apps
./install_pivariety_pkgs.sh -p libcamera_dev
./install_pivariety_pkgs.sh -p libcamera_apps
# Install the Hawk-Eye kernel driver
./install_pivariety_pkgs.sh -p 64mp_pi_hawk_eye_kernel_driver
@going-digital
going-digital / math.wasm
Last active December 26, 2023 07:44
WebAssembly native sin, log and exp functions optimised for code size.
;; Native implementations of sin, log and exp functions.
;; sintau: 41 bytes code, 34 bytes shared code, 24 bytes data
;; exp2: 25 bytes code, 34 bytes shared code, 20 bytes data
;; log2: 37 bytes code, 34 bytes shared code, 24 bytes data
;; Total 137 bytes code, 68 bytes data
;; Wasm-opt -Oz tries to optimise out $half by converting to f32.consts, but that actually takes up more space, not less.
;; Polynomial coefficients calculated by accompanying python script.
;; call $evalpoly parameters will need to be manually changed for different length polynomials.
@jitran
jitran / app.py
Last active September 18, 2022 00:09
AWS CDK Python - Overriding the resource logical IDs
#!/usr/bin/env python3
from aws_cdk import core
from my_python_sample.my_python_sample_stack import MyPythonSampleStack
app = core.App()
MyPythonSampleStack(app, 'my-python-sample', env={'region': 'ap-southeast-2'})
@yang-song
yang-song / grad_lib.py
Last active August 8, 2022 19:38
L operator and R operator in Tensorflow
import tensorflow as tf
def gradients(f, x, grad_ys=None):
'''
An easier way of computing gradients in tensorflow. The difference from tf.gradients is
* If f is not connected with x in the graph, it will output 0s instead of Nones. This will be more meaningful
for computing higher-order gradients.
* The output will have the same shape and type as x. If x is a list, it will be a list. If x is a Tensor, it

An error

I was using TEQC to do quality control of my WES bam files aligned by bwa-mem. My data are paired end, so a function reads2pairs is called to make the paired-end reads to be a single fragment. I then get this error:

> readpairs <- reads2pairs(reads)
Error in reads2pairs(reads) : read pair IDs do not seem to be unique

I asked in the bioconductor support site and went to the source code of that function.

@marten-cz
marten-cz / docker-run-user.sh
Created April 8, 2017 15:57
Run docker with current user
# Run command with the same user ID as current user
# -v $(pwd):/tmp/mount - mount current directory to /tmp/mount/
# --env HOME="/tmp/" - some commands may need to be able to write to your home, se it to temporary folder
docker run -ti --rm -v $(pwd):/tmp/mount —user=$(id -u) --env HOME="/tmp/" debian:jessie
# Mount current users and group and be able to use them
# mount /etc/group and /etc/passwd read only
# set user from $USER
docker run -ti --rm -v $(pwd):/tmp/mount -w /tmp/hx -v /etc/group:/etc/group:ro -v /etc/passwd:/etc/passwd:ro —user=$USER debian:jessie
@arogozhnikov
arogozhnikov / SpeedBenchmarks.ipynb
Last active August 29, 2015 14:24
Speed benchmark of number crunchers in python
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@mstaflex
mstaflex / rc.local
Created April 30, 2015 14:25
Setting up simple execution environment with tmux and rc.local
# executing a script for user 'pi' with std. shell
su -c "./home/pi/run_robbi_demo.sh" -s /bin/sh pi
@entaroadun
entaroadun / gist:1653794
Created January 21, 2012 20:10
Recommendation and Ratings Public Data Sets For Machine Learning

Movies Recommendation:

Music Recommendation: