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bedroge / easybuild_test_report_11538_easybuilders_preasybuild-easyconfigs_20204719-UTC-09-47-22.md
Created October 19, 2020 09:47
EasyBuild test report for easybuilders/easybuild-easyconfigs PR #11538

Test report for easybuilders/easybuild-easyconfigs#11538

Test result

Build succeeded for 1 out of 1 (1 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS SeqKit-0.13.2.eb

Time info

  • start: Mon, 19 Oct 2020 09:46:56 +0000 (UTC)
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bedroge / HMMER-3.3.1-GCCcore-9.3.0_partial.log
Created October 20, 2020 08:56
(partial) EasyBuild log for failed build of /local/tmp/f115261/eb-UAGL56/files_pr10558/h/HMMER/HMMER-3.3.1-GCCcore-9.3.0.eb (PR #10558)
== 2020-10-20 10:52:04,307 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
== 2020-10-20 10:52:04,348 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /software/software/GCCcore/9.3.0/lib/gcc/x86_64-pc-linux-gnu/9.3.0:/software/software/GCCcore/9.3.0/lib64:/software/software/GCCcore/9.3.0/lib (previous value: '/software/software/GCCcore/9.3.0/lib/gcc/x86_64-pc-linux-gnu/9.3.0:/software/software/GCCcore/9.3.0/lib64:/software/software/GCCcore/9.3.0/lib')
== 2020-10-20 10:52:04,348 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
== 2020-10-20 10:52:04,948 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /software/software/binutils/2.34-GCCcore-9.3.0/lib:/software/software/zlib/1.2.11-GCCcore-9.3.0/lib:/software/software/GCCcore/9.3.0/lib/gcc/x86_64-pc-linux-gnu/9.3.0:/software/software/GCCcore/9.3.0/lib64:/software/software/GCCcore/9.3.0/lib (previous value: '/software/software/binutils/2.34-GCCcore-9.3.0/
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bedroge / PIPITS-2.7-foss-2020a_partial.log
Created October 20, 2020 08:56
(partial) EasyBuild log for failed build of /local/tmp/f115261/eb-UAGL56/files_pr10558/p/PIPITS/PIPITS-2.7-foss-2020a.eb (PR #10558)
== 2020-10-20 10:56:02,598 easyblock.py:280 INFO This is EasyBuild 4.3.0 (framework: 4.3.0, easyblocks: 4.3.0) on host build.hpc.rug.nl.
== 2020-10-20 10:56:02,598 easyblock.py:286 INFO This is easyblock PythonBundle from module easybuild.easyblocks.generic.pythonbundle (/software/software/EasyBuild/4.3.0/lib/python2.7/site-packages/easybuild/easyblocks/generic/pythonbundle.pyo)
== 2020-10-20 10:56:02,598 easyblock.py:894 INFO Build dir set to /local/tmp/f115261/PIPITS/2.7/foss-2020a
== 2020-10-20 10:56:02,598 easyblock.py:954 INFO Software install dir set to /home/f115261/easybuildinstall/software/PIPITS/2.7-foss-2020a
== 2020-10-20 10:56:02,598 easyblock.py:959 INFO Module install dir set to /home/f115261/easybuildinstall/modules/all
== 2020-10-20 10:56:02,598 easyblock.py:265 INFO Init completed for application name PIPITS version 2.7
== 2020-10-20 10:56:02,599 pythonbundle.py:73 INFO Detection of downloaded extension dependencies is enabled
== 2020-10-20 10:56:02,599 pythonbundle.py:77 INFO exts_default_o
@bedroge
bedroge / easybuild_test_report_10558_easybuilders_preasybuild-easyconfigs_20201020-UTC-09-10-49.md
Created October 20, 2020 09:10
EasyBuild test report for easybuilders/easybuild-easyconfigs PR #10558

Test report for easybuilders/easybuild-easyconfigs#10558

Test result

Build succeeded for 7 out of 7 (4 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS HMMER-3.3.1-GCCcore-9.3.0.eb
  • SUCCESS ITSx-1.1.2-GCCcore-9.3.0.eb
  • SUCCESS VSEARCH-2.15.0-GCCcore-9.3.0.eb
  • SUCCESS FASTX-Toolkit-0.0.14-GCC-9.3.0.eb
@bedroge
bedroge / easybuild_test_report_10558_easybuilders_preasybuild-easyconfigs_20203920-UTC-09-39-23.md
Created October 20, 2020 09:39
EasyBuild test report for easybuilders/easybuild-easyconfigs PR #10558

Test report for easybuilders/easybuild-easyconfigs#10558

Test result

Build succeeded for 8 out of 8 (5 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS HMMER-3.3.1-GCCcore-9.3.0.eb
  • SUCCESS ITSx-1.1.2-GCCcore-9.3.0.eb
  • SUCCESS RDP-Classifier-2.13-Java-11.eb
  • SUCCESS VSEARCH-2.15.0-GCCcore-9.3.0.eb
@bedroge
bedroge / easybuild_test_report_10558_easybuilders_preasybuild-easyconfigs_20204520-UTC-11-45-56.md
Created October 20, 2020 11:45
EasyBuild test report for easybuilders/easybuild-easyconfigs PR #10558

Test report for easybuilders/easybuild-easyconfigs#10558

Test result

Build succeeded for 8 out of 8 (5 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS HMMER-3.3.1-GCCcore-9.3.0.eb
  • SUCCESS ITSx-1.1.2-GCCcore-9.3.0.eb
  • SUCCESS RDP-Classifier-2.13-Java-11.eb
  • SUCCESS VSEARCH-2.15.0-GCCcore-9.3.0.eb
@bedroge
bedroge / easybuild_test_report_11569_easybuilders_preasybuild-easyconfigs_20204823-UTC-15-48-18.md
Created October 23, 2020 15:48
EasyBuild test report for easybuilders/easybuild-easyconfigs PR #11569

Test report for easybuilders/easybuild-easyconfigs#11569

Test result

Build succeeded for 1 out of 1 (1 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS breseq-0.35.4-foss-2020a-R-4.0.0.eb

Time info

  • start: Fri, 23 Oct 2020 15:43:14 +0000 (UTC)
@bedroge
bedroge / easybuild_test_report_11877_easybuilders_preasybuild-easyconfigs_20205414-UTC-09-54-14.md
Created December 14, 2020 09:54
EasyBuild test report for easybuilders/easybuild-easyconfigs PR #11877

Test report for easybuilders/easybuild-easyconfigs#11877

Test result

Build succeeded for 1 out of 1 (1 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS libgit2-1.1.0-GCCcore-9.3.0.eb

Time info

  • start: Mon, 14 Dec 2020 09:53:08 +0000 (UTC)
@bedroge
bedroge / easybuild_test_report_11904_easybuilders_preasybuild-easyconfigs_20200817-UTC-16-08-54.md
Created December 17, 2020 16:08
EasyBuild test report for easybuilders/easybuild-easyconfigs PR #11904

Test report for easybuilders/easybuild-easyconfigs#11904

Test result

Build succeeded for 1 out of 1 (1 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS numba-0.52.0-foss-2020a-Python-3.8.2.eb

Time info

  • start: Thu, 17 Dec 2020 16:07:34 +0000 (UTC)
@bedroge
bedroge / easybuild_test_report_11910_easybuilders_preasybuild-easyconfigs_20200621-UTC-08-06-54.md
Created December 21, 2020 08:06
EasyBuild test report for easybuilders/easybuild-easyconfigs PR #11910

Test report for easybuilders/easybuild-easyconfigs#11910

Test result

Build succeeded for 1 out of 1 (1 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS Stacks-2.54-foss-2020a.eb

Time info

  • start: Mon, 21 Dec 2020 08:06:06 +0000 (UTC)