brockpalen

#run blender in batch, take all settings from those saved in the .blend file
#http://wiki.blender.org/index.php/Doc:2.6/Manual/Render/Command_Line
blender -b blender.blend -o //imagename -F PNG -x 1 -f 1

brockpalen

#!/usr/bin/python

#Brock Palen
# brockp@umich.edu
#
'''
Takes data in the form of:

metric         number

brockpalen

#delete all my jobs,
# only do this if you have fewer than a few hundred jobs.
qdel $(qselect -u $USER)

#delete all my queued jobs
qdel $(qselect -u $USER -s Q)

#delete all my jobs submiting with the wrong account
qdel $(qselect -u $USER -A wrongaccount)

brockpalen

%Brock Palen brockp@umich.edu 1/2014
%To compare against a single core run:
%  hwloc-bind core:0 matlab -r caenfft\(1e7\)

function caenfft(dim)

if ischar(dim)
  dim=str2num(dim);
end

brockpalen

#Example for Theano 0.6 on CAEN-HPC FluxG

#load modules
module load python/2.7.5 cuda/5.5 theano/0.6

#use device=gpu to let our system autoselect the GPU to use
#use device=cpu to run your code on another system
THEANO_FLAGS='floatX=float32,device=gpu' python script.py

brockpalen

#download and install Globus toolkit, get version 6.0
tar -xzf globus_toolkit-6.0.1443479657.tar.gz
cd globus_toolkit-6.0.1443479657

#enable GSI and myproxy for myproxy-login 
./configure --prefix=<INSTALL_PREFIX> --enable-myproxy
make -j 12
make install

#setup location for XSEDE Certificates

brockpalen

#Brock Palen brockp@umich.edu
#   5/2015
#   GridFTP config for Logstash

input {

#track the globus gridftp transfer logs
        file { 
                path => [ "/var/log/gridftp-go.log" ]
                sincedb_path => "/var/run/logstash-gridftp.sincedb"

brockpalen

#include <iostream>
#include <stdlib.h>
#include <sys/time.h>
#include <unistd.h>


//#define DIM 20000
/*****
Total size used should be DIM*DIM*sizeof(double)
compute the matrix multiply dgemm

brockpalen

function [lib, extras] = mpiLibConf
%MATLAB MPI Library overloading for Infiniband and Ethernet Networks
%
%USAGE
%   place in ~/matlab/mpiLibConf.m
%   Update to point to your MPICH / Intel MPI etc location

% mvapich has two extra libraries libmpl.so and libopa.so  
%  use # ldd /home/software/rhel6/mvapich2/1.8/lib/libmpich.so
%   Any libraries from the mpich/mvapich install location need to be included in extras

brockpalen

function benchmarkpct(ncpus)

sched= findResource('scheduler', 'type', 'mpiexec') ;
set(sched, 'EnvironmentSetMethod', 'setenv')
set(sched, 'MpiexecFileName', '/home/software/rhel6/mpiexec/bin/mpiexec')

sched

%get current mpi library
mpiLibConf