brooksph

'''
Author: Phillip Brooks
Affiliation: UC Davis Lab for Data Intensive Biology
Aim: A Snakemake workflow to call variants from metagenomic data
Date: Tue March 20 2018
Run: snakemake --use-conda --use-singularity
Latest modification:
'''

##--------------------------------------------------------------------------------------##

brooksph

#!/bin/bash
#####################################################
# Name: Bash CheatSheet for Mac OSX
# 
# A little overlook of the Bash basics
#
# Usage:
#
# Author: J. Le Coupanec
# Date: 2014/11/04

brooksph

Usage:

./sourmash compute --scaled 5000 data/GCF_000005845.2_ASM584v2_genomic.fna.gz -f

python e7d910326792554e1fbf826fe12da83f/subscaled.py GCF_000005845.2_ASM584v2_genomic.fna.gz.sig foo.sig 10000

and now foo.sig will contain the newly subscaled signature.

brooksph

Homebrew build logs for homebrew/science/prokka on macOS 10.11.6
Build date: 2016-10-04 22:08:37

brooksph

brooksph