git log --graphy --decorate --pretty=oneline --all

*   7f97348f122768e391bcbf70f78c3d04961f4fcd (upstream/master) Merge pull request #46 from aps-7bm/master
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| *   7eb98bd11afb04f5285eff9511fa144a9fc89257 (origin/master, origin/HEAD) Merge remote-tracking branch 'upstream/master'
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* | 8cb16b3d2b728e0fd0f91127bb2a4d0f0ca76632 Update README.rst
* |   274b675608196b6992b5b523894f7e89974ecc38 Merge pull request #44 from decarlof/master
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| * | 65a7b7d771c75e3af6dd9317461e73c49285c7ab fix auto-mock
| * | 99efa7a494ef2f77c902bb25557e98c5d3a5297e fist doc commit
| * | 0689b7e0d573234addddf267daef90edd0415677 fist doc commit
| * | 6b26c7e5109266eac43c24cdaa8fd67e07fc2523 added doc example
| * | 332ac589c03dc8b1d04f5d156f60a9f59ae4025b ignore docs/built
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* | fbb51f38d385d2c3a76da26be2f791e4086f5cf0 fixed blocked-views options
* |   c112730e96ebdda8c2241f1cdb2efc4977c09ddd Merge pull request #43 from aps-7bm/master
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| | *   9292d729573571902ecc4e69306e31af13640a21 Merge branch 'master' of github.com:aps-7bm/tomopy-cli
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| * | d447716528531745a79329fd182053862c4f57b4 Minor change to log statements for flip-and-stitch scans.
| | * 0b461a75a379bb4fd96ca6e8b1809efcdb156cfd Include bug fixes from rechunk branch.
| | * be5a0d2772203adc0cd0f6454f00fdd58f23958a Bug fixes to beamhardening.py and added tests. A few bugs, including a major one in the calculation of the absorbed spectrum, were found. Added tests/test_beamhardening.py to test beamhardening.py accuracy.
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| *   ad110bcf04267583222e831e6172bc1e579ec7a9 Merge branch 'separate_try'
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| | * eac2f7f6fe14f9fc61743c397e34e63ca8b3db4e Add in test and auto-complete code.
| | * d02d111d126250d0cc99441721a78da1659f49aa Further code cleanup after fixing 'try' recon for flip-and-stitch
| | * 50667f7c7c3a4c966278bbb23c60346b3ccdbbaf Changes to allow for 'try' reconstructions for flip-and-stitch scans.
| | * c374cc354adf3fe860953c53e53821802bc7b159 Change options for rotation-axis-auto to override file reading.
| * |   e337ca7568c51d82cfa6934211510b744be71041 Merge remote-tracking branch 'upstream/master'
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* | |   bf92f6d4c58bd0c8d77e32d83ac77de63b32b2c2 Merge pull request #42 from canismarko/automatic_filter_params
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| * | | fd5af4af0ecbd073b9c369441c00bdc3834d6537 Added options for automatically reading the filters from HDF5 file.
* | | | 7fb4d6904ae48e1416c00a2595abc206d997f7ba DEV: Add extra padding in phase retrieval for correct processing data by chunks
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| | | * 70af809dfd9161b413fba2b2c7e43d1ca2e4abfb (origin/mock_test, mock_test) Initial work on testing for center of rotation.
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| * |   ed96212d077f617a12075bd08ea1e73a5cb60cf6 (origin/github_catchup, github_catchup) Merge remote-tracking branch 'upstream/master' into github_catchup
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* | |   f67a78e4fe31f64d7296a75a2f932742fb02b88b Merge pull request #41 from canismarko/add-testing-framework
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| * | | c17a153851d8cf99162dfc4d5ed460f4bdcf169b Added basic testing framework.
* | | | d400bf54e8ded3120f925108143d39adc6b81717 Add possibilty to choose directory in autocomplete
* | | |   e64b5f69ef73720bd0a833c18d39fb68342f6f96 Merge pull request #40 from nikitinvv/master
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| * | | | 81b031dce419c9c2f49f64347cf78581880e01c3 fix auto-complete for handling many parameters
* | | | |   c8e8d896e87150cdbe91441dae3da0c3702a535f Merge pull request #39 from decarlof/master
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| * | | | ca52dc0f756db653031d71801ce822bb233bf98f cleanup
| * | | | 65d2d935f422512d9b4e43e089f82b07b2348e90 fixed binning on full recon
| * | | | 6dab62a022195d736c407c8e13a310eded97bf7c auto complete is done once during the installation process
| * | | | efcbccbfdf3721ab377ba18477087b03e7608079 auto complete is done once during the installation process
* | | | |   1aa3ad05c943a3b8a8e658428f6ea1449eb2fe91 Merge pull request #37 from decarlof/master
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| * | | | 2d25900d751fb49961ee8974f2e4d94904d4f3d9 removed sacred test
| * | | |   724d75f313ad5ee89a08410573323d73aef466ae Merge pull request #2 from tomography/master
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* | | | | 74ad10b4d59d001afd5210227f39326919c1bca7 Update README.rst
* | | | | 33a214f59006c17eb66e49f77d7c60dc2d54658a Update README.rst
* | | | |   dffc1ed939784f7baef172ff89391ef0030f5a41 Merge pull request #35 from nikitinvv/master
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| * | | | 92b796f50b4af78d98017771f116c29e96defebb Delete complete_tomopy.sh
| * | | | d16d743540e60465b460fe30e91d25fe8e5f5b61 DEV: add bash autocomplete for tomopy recon
| * | | | 4941ae4ac2c2e155ac36c8cd0f901e58ff83a244 DEV: add autocmplete for tomopy recon
* | | | |   81c109b051b5aee1534cc914a07cf04f2e176112 Merge pull request #33 from decarlof/master
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| * | | 1c5f503b5b9c3e0f3a64d2bb36d1a7181b6730af clean up
| * | | a13576e4f433c68f8b007a7dd783cd689acb2e32 fist commit testing https://sacred.readthedocs.io
| * | | 3bbe72002e7cd55834e07d4aff0ceffbec8b68be fist commit testing https://sacred.readthedocs.io
| * | | 44226cbfd5f1947437baea3ec5c7f7437455fc08 fist commit testing https://sacred.readthedocs.io
| * | | 4184d439d9dd6018d8c5b518bf8f967642d7d932 fist commit testing https://sacred.readthedocs.io
| * | | cf9ca9bfc874fd1439ff0211ea4b88c2a55d60bd renamed back config.write()
| * | | 335b3f15a5c6326cd4b6d131795bc305ed5bebac fixed error
| * | | fd39752028288320ddc03a89fbd2c8260662a204 which one is preferred?
| * | | c2413b6b91abe5f2e6bb8d9c49cff7859706e771 renamed write() write_config()
| * | | 33c5f545feedcdc58920d8cea448beb5232e15d1 renamed update_log() update_config()
| * | | f674e019414222df5a676465c233676f980afe31 simplyfied update_log() logic
| * | | 6f339ce0c53965f597f450f7a1a3d8ee6df29171 adding --config-update option
* | | |   ad07fc2d1f6521e8f1fc5b064c6c37859fc59675 Merge pull request #34 from aps-7bm/master
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| * | | a1ab3c84b1be528653416d85ee38bffeaa6778d9 Clean up imports of matplotlib from debugging for previous commits.
| | | * 637ce29c8e7e06bc830ade7bd8e87e7b77edd05f (HEAD, master) Changes made during Wolfman GUP beamtime Feb 2020.
| | | * de986bea7a2e8bcd22bf85ebd421584cfd5af04b Changes to find_center.py for flip-and-stitch scans. Change to beamhardening.py for a filter of 'none'.
| | | * 489da3c2b4af0db5404d93d4164275736465e293 Increase number of points for spline fit in beamhardening.py This avoids oscillatory behavior at low transmission with highly absorbing materials (Pb, Mo).
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| * | f6fbbbd2fdfef5f9b17efbbc88619833154a1830 First version with flip-and-stitch rotation axis working.
| * |   bedec0e2937b052aaa3fbf700349e3e20071df14 Merge remote-tracking branch 'upstream/master'
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* | |   1b5ad1565ea869059f86259981469fc136a6c8e7 Merge pull request #31 from decarlof/master
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| * | 43af361d983e6328c509a8876c94d7f09547c091 cleanup
| * | e3d632f21239de512f4d03405256556cb5409b18 fixed reader errror
* | |   5be8d49928c01e27633e805b0aa84899456a9332 Merge pull request #30 from decarlof/master
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| * | 3e601532979e8450ad43adc7bfd0e66d6ef88576 docs updated
| * | e9f778b051ce86b68f1fbed4117d8dc2f5f2094d fixed errors
| * | d24c8ca63492de5cfe6ea40f675c1ebac0c32190 added data file converter from pre-2015 (proj, dark, white) hdf files in a single data exchange h5 file
| * |   a29075e81614e70db6b1f8b0f87d95926ef8e37d Merge pull request #1 from tomography/master
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| | * cadb31727d5658e3743b72cd8cefc050ca567faa Median filter data_white and data_dark if they are an image stack.
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* | 9cbccef9473fa95e2c7cf11b2d578ac433650caf Update README.rst
* |   2699c2e476aeaafedb94ba24a8834b26b6cd2bce Merge pull request #27 from decarlof/master
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| * 2eaa6d52fc551a516e5acf298318da59ffb5d1c2 removed print messages
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*   5ca5aaf174252cc54579f11568cde952417355ce Merge pull request #25 from aps-7bm/master
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| *   2a8d378416f998616bace51d795eb62d0ca86d9c Merge remote-tracking branch 'upstream/master'
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* |   4056f4d67e0a1851e17970cee5d822e8524e1d27 Merge pull request #24 from decarlof/master
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| * | 76d78cce84dddc79f5cea60f3f97275ea6c000f3 clean-up
| * | 856bc6b9a93b967c69c1a701d883c6a29e407c8c fixed error
| * | 9a9892d99c92e0f3a9cbb82de853763d9a260125 standardized hdf file name
| * | 1518d5a981fe4b97956900217e6070450ba8014c moved update_log funtion to config.py
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* |   8a82a9813e8d98f947e77dfc1ab80d9b0357c770 Merge pull request #23 from aps-7bm/master
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| | * cf39731877b988efb3c40996791a56c10d9c1949 Change log.py so it doesn't use color codes for the log file. This uses a subclass of logging.Formatter. The format is different for the log file, including the name of the logging level, since a reader wouldn't have a color to go by.
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| * cd1b183b7ffdb5b9b6cbe301dc7430f0863e041f Fix bugs from change of parameter hdf-file to file-name. Also add Gaussian blur to gridrec recon used to bootstrap astrasirt.
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*   72d1205f223b1b5e8fe9295eaea18c905e0db767 Merge pull request #21 from decarlof/master
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| * c8db287867c4504f24df68fc0995b06263450692 tomopy recon --file-name directory (not file) now handled multiple files consistently withe when a single file is passed
| *   e19ebb039b3024f5eb4163e8aa5dda3e3b6ea4ae Merge pull request #1 from tomography/master
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* | 2f2f02545a18cbd12dcdb676724334acd3cb1705 fixed typos
* |   e5b8aa5cb9a9f3c515aad9d761b9bde3ee310d00 Merge pull request #19 from decarlof/master
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| * 9d263e698180debb5e3be256a0855452ca4ee432 fixed error
* |   29807efb28af952fa4fb0d9c8d170226df96ffd7 Merge pull request #18 from decarlof/master
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| * 29fff48709789af39f7b9ecb924ca3414a0e5bc2 added support for different raw data file format
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*   68b339ee615902593c14902af6bf1cdc96578811 Merge pull request #17 from aps-7bm/master
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| * dd4de5871ef85b94d5a4a9b9b270e5d459d6bba3 First working version for bootstrapping astra recon methods.
| * a21fe8ead98cc86d14171f47d9871563e952d02b Remove constraints from astracgls, since they are not used by ASTRA.
| * 2f6791a1f4d1cf5b2729206dc470200b2332b662 Revise astrasirt num_iter to be number of iterations per angle.
| *   9585f77067e0e44afdef8fb818d509d74afd491b Merge remote-tracking branch 'upstream/master'
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* |   5d6d6f2eeb28c537434421f1c3e457b10c1f77ab Merge pull request #15 from decarlof/master
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| * | f28f76713d15e581035208391283bd540dad4c25 reconstructed files for try,slice,full  are now all under the same top xxx_rec/ directory
| * | 24a00e1dca6cd75ec7e7ee083dd06c9bd1c46a4f overwrite is set to True when doing a full size recon
| | *   973787d61d3db2e0fb2876c928d6d94d6b9d7857 Merge remote-tracking branch 'upstream/master'
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* | |   a2e10361d23842b895e121162c88e1bc0b2732c3 Merge pull request #13 from decarlof/master
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| * |   264ba6e9d4141d5ea69b3e175c56de561fc47027 Merge branch 'master' of https://github.com/decarlof/tomopy-cli
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| | * \   d14a8d860c9c9b799abe82632b1f03b2799cb2ce Merge pull request #1 from tomography/master
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| * | | 45a64aa61cd8e10a77c94d45d69c4d032e0e6f5d renamed padding to gridrec-padding and put in a separate section
| * | | 34792a6fc88779df186d43281307a63971ba650f lock minus-log and fw-pad to True
| * | | 7cece79f63724aceb88818deab9edd0c96124e8c added status option to print the content of the current logfile
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| | * 8f3b74546c772a3b5e77a7b40459a75a41bb3f1e Work on supporting more recon algorithms.
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* |   f56bbf4b90febc458e7948a39175bf257bff097e Merge pull request #12 from aps-7bm/master
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| * | d680f755a8e37ff260a112869e4cd5a6738126e0 Reworking reading parameters from DXchange. Now reads effective pixel size (pixel size / magnification) and scintillator thickness and material (for beam hardening). Reorganized so adding more parameters should be easier as needed. This reading is now mostly in file_io.py, as is the rotation axis reading.
| * | f3673da1d05ba80547b7428f6bfb06eca8de2078 Fix logging messages so they match Francesco's format
| * |   06609d9bd07ac49254aa59f2e1a51f23a0e52596 Merge remote-tracking branch 'upstream/master'
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* | |   16394be85f46ffb7a1fb64960c09dcda536ede48 Merge pull request #10 from decarlof/master
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| * | 37ad3f831205347ade2be1c7c7517970d8dbb7ab fixed H5py Deprecation Warning
| * | 38e6807d6dad23948e57984cacd2772454d193e7 fixed logic issue in auto center setting
| * | 172f2addc456fd7f8ae933441ee38fb6f8f9203b default is always False
| * | 86bb5abf90bc3fc87c4622f6f62d384198c977ea fixed logic
| * | be88093ad2dd6944b1b30cb55dc4473a94ed2f14 typo
| * | a78a6a0144f8cfb84e615e0aa997fe1d4bf285bf renamed hdf-file-save-log to hdf-file-update
| * | 4703edf494e21a8b195a29af6a5584d44a6afdff currently all config file data are saved as string ...
| * | 4553e38f4bf0a823ad0be26ec32c731decf5bf79 all config file information are now saved when --hdf-file-save is set
| * | fc3ad7cc04e580c8115a4184bf7fe61482d5319f moved rotation axis params under find-rotation-axis section
| * | 0d154133c714938132d6e4e98b30788b5abc0f1d clean-up
| * | 6e569ea91fbdb5bbb14699578e39904181009615 fixed logging
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* |   053308c6895f80d8f59c0e696a0a6e4da2ee7451 Merge pull request #7 from aps-7bm/master
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| | * 1be5bb9221abe1e36dc67a16a3bf5f88df56331a Attempt to automatically find scintillator thickness and material.
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| * 3d340051c45f9cc2f32167ed26a27836ea9f34bc Add threading to TIFF file writing.
| *   e40ec0e374fdd5e8f03e38d79667ccba88e738d8 Merge remote-tracking branch 'upstream/master'
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* |   426e8360a4de6f17ae159c1842a63795fc18f7d1 Merge pull request #5 from decarlof/master
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| * | a866ca22e99a6b656d5761c72da6e3f2a1c6cf2a fixed str' object has no attribute as_posix and set directory to save log to recon directory
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| * 64e6a3194a22a3c52552f969fa3a574cde39e273 Add auto center of rotation calculation. If the code can't find one in the HDF file, it will find the center automatically if rotation-axis-auto = True in the config file.
| * 2555d4c4a8ce134ea615811ac421bd4e5e74186d Bug fix for displaying file name for .conf file in a way that would work for Windows. Also revise writing of data to DXchange file so it works with h5py version < 2.10.
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*   01ddb2c570586ee07b71324fbfec99c30237a2ba Merge pull request #2 from decarlof/master
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| * 17c4d23d330c567d6ab42c3e77f23173a7cafea5 added --hdf-file-save-log option to save config file in the hdf raw data file
| * e2a232677d697907b864ef0105242d6aad2d7ed5 prep.all needs sino for hardening correction
| * e207634f9958129d69b4d1228691fd6e36da4349 added missing parameter
| * d7a56a7bd8d1f4e7023b40e734d7adbd9e4130cb standardized log message for blocked views
| * 4123a2fb6dd82cf8ad4f422f5b584d968ae7ac43 needed this changes to compile on OSX/python3
| * 20e074c7bf34713edb8b4436ec318b1297e1477d typo
* |   ca6b2a819c17781ac9e109e07bae01533f3a0e2d Merge pull request #3 from aps-7bm/master
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| * 3cfc50ac64006dd04435edc4607f7f434761f2a6 Added several features and performed bug fixes.
| * 3a81d05ce67806b3e5fdbff524f30e184a998591 Attempt to parallelize beam hardening. Bug fix on last chunk of recon.
| * c4541e1dffba7d79a6e5ce15f4a1407c8236b570 Fixes for the last chunk of recon if it isn't a full chunk.
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* 0a20704c5be8c8f2c10c05f88f697bedbb11180d Several bug fixes.  First working version after merging changes from A. Kastengren and Francesco.
* ef8fba4f445089c6ff3ca80223eb002815249d2c Fix typo in config.py.
* 2909ceb6e62332449d07af8bbd83402846657437 Reconcile changes by A Kastengren and Francesco up to 1/13/2020.
* 6fd87b4c3023364bfe506446eac0d5c540cc5c53 typo
* 26110405f8cb1f9367cccdd1b77252ad220f4c0a setup post.py to contain all post reconstuction processing tasks
* d3bf9c56df318141e958cd605ec85733a75e7c3d recs for slice and full are now store under samplename_rec
* 38f0d45a0bc5bef8c224483a1274538704e422dc setup post.py to contain all post reconstuction processing tasks
* 8fa24e4439adca8e019189571fb8221c836c2d6c proc.py renamed to post.py to contain all post reconstuction processing
* c35ccc58cd5ea595ee3c01ed0417def31111a44d consolidate all recon tasks under  recon.py
* cb03ae678aa7caccbeca3bdd960523cdd80346c8 restored find_center.py as independent module
* 3b11b2f1af5c616b41b4302841cbe6d26f4cf9bd standardized log messages
* 1f9889a08507c8d60827c3cc1b5be6200d70308e standardized log messages
* ab8af16b8de16933b91f03d383519159d12a0267 added padding as an option
* 4eddeb9b8ae29aa67e0a7eb58c48892ee8f64b20 undo manual sync with Alan's fork
* 6a3f9608c3ecc8171cce2675c7d4916e92df73e0 manual sync with Alan's fork
* c9d390b09bddc3548b60b8b413f5265fe1ccb342 typo
* e181cb30a42693af0f8d711fcf1824c32e19dc91 addend counter
* 7194c79da2964a27188c5b26f2457229ff553828 removed log.error
* 5f706b6b5dca76dbe0bd94103fce1f7b8e9058ea moved find_center() to prep.py; improved log info
* c0eb566fc58017317e184a586a77b69c0de07453 find_rotation_axis now uses the preprocessing from tomo.conf
* e78f35d1e6802482592c12bf5673573764aa35e0 find_center is now using the status recon parameters
| * cf4eb73f34844692b40e9d6a8fcd35037a20222b (upstream/introspection, origin/introspection) working on introspection
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* f01578d344a0592dc9bdd3a6f39b71b8326793a7 clean-up remove stripe naming
* 005aaf15e1acc55dd97b19761c43a8ea63c8c262 clean-up remove stripe naming
* 9c745790cc995d1c4fdefc4bb37f5d074e0fc52b typo
* fc99d69a2970d8d3a3cabb0d27f3550e9f0fa648 modified for windows compatibility
* 291e77d79ad68cf28812f67f0359e2f36fa3861c tomo.config is copied to recon directory only for full reconstructions
* 6cf70856983fd8f81b3d7bc10e53d999ada0de83 try rec will not save logs
* f845e14846bf88c96b5ea7f52d3721996be16de9 added binning to log
* 9b7a5348e0533d7198b4918524c71e930b4eda4c slice recon are saved in slice_rec folder for quick inspection for --hdf-file /path/ reconstructions
* b0c80bf44bdf21bebdb478cb971cde2f91da7b17 improved command & file logging
* b0a9ae262914cde2ed6750a66877b523cd8e52d4 clean-up tested on Stu data sets
* 0281fabae7ab939197a46a923da735b4a2b17dc1 try passes an array of rotation centers and this is only supported by gridrec
* b19c2cef54e63aa25628420510b71d03d4135130 moved binning() to proc.py
* ff81b0410bb0a22dd33b1ca27da3f9b6c8cea881 integrated try with full/slice
* 6bc6596b4efbf3d1f1e8be2fce95907f3062bc3c integrated try with full/slice
* 44ea962fc8eb9b38cd2d099dcff24b2283200a22 try option ok
* 048247aaf91fedb844ca8c814fb7eed731c952d8 binning ok for slice and full options
* 2e2f51d6d7c4d44b5b32792763d875ce6462aa76 tested OK
* 686efffd951ad031db77f505cb79b149172e447a cleaned up folder reconstruction
* 5ecc52daa674d6f5df0e484558bd5d3ceef1e0dc added license
* e6b530411cbc66870323e6347a957b2ccde5ccc9 cleaned up folder recon
* 26a444b472cc43545bb689719d6c7be87b91b97c docs update
* 370cdc39d53f21e238ddb71e695505d52746e77c --hdf-file now support folders containig multiple hdf files
* 5f802f10a3b721fadc8573ff253145449ed87885 clean-up tested OK
* 46c9429677f1bae07a6bb5d7d6c37973381c4161 clean-up tested OK
* e8109f91dfc5c0ebd7f785567d51ffa90d60c220 first commit
* ed498e3eafca7e1bc0679f9fa11484c68ab77daa moved all prep function in prep module
* cd8dc06bfcda10795d744119962b1ee535ee35e4 first commit
* 10a1fd337e7d7b8136405dc1f6f11c6a996bf5ca mved rec_full and rec_slice to a single function
* c643725717c46bf1f3d183b24185b83b3b881627 renamed process to prep
* ded63a4a82e20cc9151b68a097b04a03e9cde148 removed tomopy recon --option command logging
* d895e92ab4c24a70386f54f1b977ed61081f6d98 clean-up
* 7b4465be06537e77fa7ef5e6fb79daa22d0528fa added log file storing in full rec directory
* fba0dfe066b46b4a3e9f9fcc1242657877415759 clean-up
* f90e9c7ab206df701c36535a8862c0720895a963 tested OK
* a8993f3f514c90ef95171016eab0d6f9eaafcf57 added rec full option
* 0e3c4ef1aa744f1e025da65eba139f5a17acb9aa added rec slice option
* 91df43009a4597381eb64458c921f280b5af0bf8 added try rec option
* 3401d63f00168de51e079c1a0f00cffd766b270f optimized config
* 8d8e01ac2662a5f392ca5fbd6f90deb49d92bed4 optimized config
* 9fb1f36652615ed18f2127ed8e66f9e7639c5e10 zinger setting tested OK
* 0bbf2c7452b23a05597c716ba60fa8c8e19b9fac docs update
* d1a81ca6f7347a5a6ca9337dcce7fb61c29cb6b7 ignored *.json
* ba7d2117407ffe9ebea3a8ee636e753439d6c96e added rotation_axis.json to config. Docs clean-up
* 1b73b7193cc3bcd40fca93afe68000a634d59ac7 updated description/use of -- config option
* be895089e85a695c94d29ff3eb0b6012e58fadac update docs
* b09b4d1b8a67c727d7d6a1969aa27215815921c6 update docs
* 8fb61d735d2b2a6ec9b44032b4e894430d95d6a6 update docs
* 5b44e258f10696c23b7f0d04d26e132a4a9d926e update docs
* a9c07d528443917667a8adc83da802f5683edcf4 added find_center option
* 398d53334f27e081021f144c3c9d7e99f06e1d6b improved readme file
* 7bb53355a4dc546c6cdee79ed1539c1d729e98a3 improved readme file
* 08f57bc423bf24465d35e4254f6c0088a5d3d78a improved readme file
* 2a556d5c76ebd4e320349977d01986c90d71d8a9 improved readme file
* 73d25cf639fa9c8a90a85ac046472349f1a5ceb8 update logging info
* 3ecde9658317c389b7065140ea4e77ceb004944d added basic recon args
* 9807912242dd4aaec001d1b4b6406c64c4e21ef8 testing config file update
* 953ac6731f547ed229b9ffb7d04cae74b19f4adf added more parameters
* 9586ab62cc6dfcdab260edad1aa3f6fd3bfb52c7 first commit
* 9e49b023c8ddf142f898112db3699ab9d0c72f2b update
* 6c11187fba7908db1f104ecca217ab25848b1fa6 renamed log_lib.py -> tomopy_cli/log.py
* 4ac9446e792535264e9d1246a743bd94c6031c22 cleanup
* abfb2412781d14a7f50c21ab58206cb16251fe67 fixed to run with python 3.6
* 899e9eb98203e37fe7508abc350f2b5553439557 first commit
* 14fc1afd10f1cb7da7ef528227c4de00beb05780 Create README.md