Daniel Jay Haskin djhaskin987

## gist:6642667
Tricks to add encrypted private SSH key to .travis.yml file


To encrypt the private SSH key into the "-secure: xxxxx....." lines to place in the .travis.yml file, generate a deploy key then run: (to see what the encrypted data looks like, see an example here: https://github.com/veewee-community/veewee-push/blob/486102e6f508214b04414074c921475e5943f682/.travis.yml#L21

base64 --wrap=0 ~/.ssh/id_rsa > ~/.ssh/id_rsa_base64
ENCRYPTION_FILTER="echo \$(echo \"-\")\$(travis encrypt veewee-community/veewee-push \"\$FILE='\`cat $FILE\`'\" | grep secure:)"
split --bytes=100 --numeric-suffixes --suffix-length=2 --filter="$ENCRYPTION_FILTER" ~/.ssh/id_rsa_base64 id_rsa_


## plink.md

      
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    Linear Regression With PLINK

plink --file <name-without-map-or-ped-ending> --linear \
  --pheno <name(.pheno)> --pheno-name <column> --covar \
  --covar-name <names-of-covariants,separated,by,commas> \
  --out <output-file-name-root> \
  --noweb \ # don't check for update of PLINK
  [--qq-plot] \   # gives expected distribution of p-values
 [--adjust] \ # has some different ways of calculating p-val

  
## PFDS_Chapter2.ml
(* Excercise 2.1
 * We proceed by induction.
 * If 'lst' is an empty list, we simply return lst itself.
 * If 'lst' is a non-empty list, we store the pointer to the tail of the list,
 * plus any pointers stored by a recursive call to suffixes.
 * []
 *)
let rec suffixes lst =
    match lst with
    [] -> lst

## openpgp.txt
This Gist confirms the Linked Identity in my OpenPGP key, and links it to this GitHub account.

Token for proof:
[Verifying my OpenPGP key: openpgp4fpr:f54cff731e7e01c3ae749b30d62daa3e080e17a9]

## header_of_pwfile.gpg
# vim: nobackup nowritebackup noswapfile bufhidden=wipe tw=0 conceallevel=2 concealcursor=nvc foldmethod=syntax syntax=password

## functions
(defn assoc-conj
  "Conjoin a value onto the list corresponding to the key `k` in `mp`."
  [mp k v]
  (if (empty? mp)
    {k [v]}
    (if (empty? (mp k))
      (assoc mp [v])
      (assoc mp
             (conj (mp k)
                   v)))))

## rdp.sh
#!/bin/sh
set -x

xfreerdp \
    "${@}"
    +clipboard \
    +compression \
    /audio-mode:2 \
    /network:lan \
    /cert-ignore \

## update-alternatives-directory.sh
set -x
dir="${1}"

for i in $(ls -1A $dir)
do
    if [ -x ${dir}/${i} ]
    then
        update-alternatives --install /usr/bin/${i} ${i} ${dir}/${i} 1
    fi
done

## build-screen.sh
#!/bin/sh

export POSIXLY_CORRECT=1
set -xe

git clone git://git.savannah.gnu.org/screen.git
cd screen/src
sudo mkdir -p /etc/opt/screen
./autogen.sh
./configure --prefix=/opt/djhaskin987/screen --sysconfdir=/etc/opt/djhaskin987/screen/ --localstatedir=/var/opt/djhaskin987/screen/  --enable-colors256

## mistral_logs
2018-06-28 21:38:37.101 29017 INFO mistral.notifiers.notification_server [req-22840e07-dbe4-4213-9ab7-a2b6ae0fe840 - - - - -] Received RPC request 'notify'[ex_id=fca02cf9-e359-4f15-8399-f87fed8f5b51, event=WORKFLOW_FAILED, timestamp=2018-06-28T21:38:36.000000, data={u'workflow_name': u'examples.mistral-basic', u'updated_at': u'2018-06-28 21:38:36', u'workflow_id': u'39a0a055-68f9-439c-8475-7ecde31af63f', u'id': u'fca02cf9-e359-4f15-8399-f87fed8f5b51', u'state_info': u"Failure caused by error in tasks: task1\n\n  task1 [task_ex_id=a9cfeda0-d8ee-4f00-bddf-d807a12ab25d] -> {status: 404, cookies: {}, encoding: None, url: http://127.0.0.1/api/v1/executions, elapsed: 0.006918, content: {u'faultstring': u'The resource could not be found.'}, headers: {u'Content-Length': u'57', u'Access-Control-Allow-Headers': u'Content-Type,Authorization,X-Auth-Token,St2-Api-Key,X-Request-ID', u'Access-Control-Expose-Headers': u'Content-Type,X-Limit,X-Total-Count,X-Request-ID', u'X-Request-ID': u'015a26a0-512d-4570-9706-e85736050037'
	Tricks to add encrypted private SSH key to .travis.yml file


	To encrypt the private SSH key into the "-secure: xxxxx....." lines to place in the .travis.yml file, generate a deploy key then run: (to see what the encrypted data looks like, see an example here: https://github.com/veewee-community/veewee-push/blob/486102e6f508214b04414074c921475e5943f682/.travis.yml#L21

	base64 --wrap=0 ~/.ssh/id_rsa > ~/.ssh/id_rsa_base64
	ENCRYPTION_FILTER="echo \$(echo \"-\")\$(travis encrypt veewee-community/veewee-push \"\$FILE='\`cat $FILE\`'\" \| grep secure:)"
	split --bytes=100 --numeric-suffixes --suffix-length=2 --filter="$ENCRYPTION_FILTER" ~/.ssh/id_rsa_base64 id_rsa_
	(* Excercise 2.1
	* We proceed by induction.
	* If 'lst' is an empty list, we simply return lst itself.
	* If 'lst' is a non-empty list, we store the pointer to the tail of the list,
	* plus any pointers stored by a recursive call to suffixes.
	* []
	*)
	let rec suffixes lst =
	match lst with
	[] -> lst
	This Gist confirms the Linked Identity in my OpenPGP key, and links it to this GitHub account.

	Token for proof:
	[Verifying my OpenPGP key: openpgp4fpr:f54cff731e7e01c3ae749b30d62daa3e080e17a9]
	(defn assoc-conj
	"Conjoin a value onto the list corresponding to the key `k` in `mp`."
	[mp k v]
	(if (empty? mp)
	{k [v]}
	(if (empty? (mp k))
	(assoc mp [v])
	(assoc mp
	(conj (mp k)
	v)))))
	#!/bin/sh
	set -x

	xfreerdp \
	"${@}"
	+clipboard \
	+compression \
	/audio-mode:2 \
	/network:lan \
	/cert-ignore \
	set -x
	dir="${1}"

	for i in $(ls -1A $dir)
	do
	if [ -x ${dir}/${i} ]
	then
	update-alternatives --install /usr/bin/${i} ${i} ${dir}/${i} 1
	fi
	done
	#!/bin/sh

	export POSIXLY_CORRECT=1
	set -xe

	git clone git://git.savannah.gnu.org/screen.git
	cd screen/src
	sudo mkdir -p /etc/opt/screen
	./autogen.sh
	./configure --prefix=/opt/djhaskin987/screen --sysconfdir=/etc/opt/djhaskin987/screen/ --localstatedir=/var/opt/djhaskin987/screen/ --enable-colors256