eaglebh

Conda

1. Create a virtual environment
   • conda create --name my_env_name python=3.8 or whatever Python version you may need.
2. List available envs (2 different ways
   • conda env list
   • conda info --envs
3. Activate virtual env
   • conda activate my_env_name
4. Deactivate current environment

eaglebh

from tifffile import TiffFile
import numpy as np


def get_crop(page, i0, j0, h, w):
    """Extract a crop from a TIFF image file directory (IFD).
    
    Only the tiles englobing the crop area are loaded and not the whole page.
    This is usefull for large Whole slide images that can't fit int RAM.