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/** | |
* Find all the genes from a DNA string file and using StorageResource class. | |
* | |
* @author (Elvis Morales) | |
* @version (1.0) | |
*/ | |
import edu.duke.*; | |
import java.io.File; | |
public class FindMultipleGenesStorage { | |
public int findStopIndex(String dna, int index) { | |
int stop1 = dna.indexOf("tga", index); | |
if ( stop1 == -1 || ( stop1-index ) % 3 != 0 ) { | |
stop1 = dna.length(); | |
} | |
int stop2 = dna.indexOf("taa", index); | |
if ( stop2 == -1 || ( stop2-index ) % 3 != 0 ) { | |
stop2 = dna.length(); | |
} | |
int stop3 = dna.indexOf("tag", index); | |
if ( stop3 == -1 || ( stop3-index ) % 3 != 0 ) { | |
stop3 = dna.length(); | |
} | |
return Math.min( stop1, Math.min(stop2, stop3) ); | |
} | |
public StorageResource storeAll(String dna) { | |
String dnaLow = dna.toLowerCase(); | |
int start = 0; | |
StorageResource genes = new StorageResource(); | |
while (true) { | |
int loc = dnaLow.indexOf( "atg", start ); | |
if ( loc == -1 ) { | |
break; | |
} | |
int stop = findStopIndex( dnaLow, loc+3 ); | |
if ( stop != dna.length() ) { | |
genes.add( dna.substring(loc, stop+3) ); | |
start = stop + 3; | |
} else { | |
start = start + 3; | |
} | |
} | |
return genes; | |
} | |
public void testStorageFinder() { | |
FileResource dnaFile = new FileResource(); | |
StorageResource genesFound = storeAll( dnaFile.asString() ); | |
System.out.println( "Number of genes found: "+genesFound.size() ); | |
printGenes( genesFound ); | |
} | |
public float cgRatio( String dna ) { | |
String dnaLow = dna.toLowerCase(); | |
int cgCount = 0; | |
int start = 0; | |
while (true) { | |
int pos = dnaLow.indexOf("c", start); | |
if (pos == -1) { | |
start = 0; | |
break; | |
} | |
cgCount += 1; | |
start = pos + 1; | |
} | |
while (true) { | |
int pos = dnaLow.indexOf("g", start); | |
if (pos == -1) { | |
start = 0; | |
break; | |
} | |
cgCount += 1; | |
start = pos + 1; | |
} | |
return ( (float) cgCount ) / dna.length(); | |
} | |
public void printGenes( StorageResource sr ) { | |
int sixtyCharQty = 0; | |
int highCgRatioQty = 0; | |
float cgRatioConst = (float) 0.35; | |
for ( String s : sr.data() ) { | |
if ( s.length() > 60 ) { | |
System.out.println( "String longer than 60 characters: "+s ); | |
sixtyCharQty++; | |
} | |
if ( cgRatio(s) > cgRatioConst ) { | |
System.out.println( "String with C-G-ratio higher than 0.35: "+s ); | |
highCgRatioQty++; | |
} | |
} | |
System.out.println( "60 characters qty: "+sixtyCharQty ); | |
System.out.println( "Strings with C-G-ratio higher than 0.35: "+highCgRatioQty ); | |
} | |
} |
TOTAL GENES = 69
Total number of strings with length greater than 60 : 23
Total number of strings with CG Ratio greater than 0.35 : 40
Longest gene length is : 489
Total number of occurances of CTG is : 224
Cheers!Wrong answer
it is the correct answer it worked with me i passed it with 90%
yes this is the correct answer , worked for me and passed with 100% can u please share your code ? @citoyenu
-- here it is the code and you can add you functions below
public class Training {
public static void main(String[] args) {
//String dna="AACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTTCTAACTGGACTCTGACCCTGATTGTTGAGGGCTGCAAAGAGGAAGAATTTTATTTACCGTCGCTGTGGCCCCGAGTTGTCCCAAAGCGAGGTAATGCCCGCAAGGTCTGTGCTGATCAGGACGCAGCTCTGCCTTCGGGGTGCCCCTGGACTGCCCGCCCGCCCGGGTCTGTGCTGAGGAGAACGCTGCTCCGCCTCCGCGGTACTCCGGACATATGTGCAGAGAAGAACGCAGCTGCGCCCTCGCCATGCTCTGCGAGTCTCTGCTGATGAGAACACAGCTTCACTTTCGCAAAGGCGCAGCGCCGGCGCAGGCGCGGAGGGGCGCGCAGCGCCGGCGCAGGCGCGGAGGGGCGCGCCCGAACCCGAACCCTAATGCCGTCATAAGAGCCCTAGGGAGACCTTAGGGAACAAGCATTAAACTGACACTCGATTCTGTAGCCGGCTCTGCCAAGAGACATGGCGTTGCGGTGATATGAGGGCAGGGGTCATGGAAGAAAGCCTTCTGGTTTTAGACCCACAGGAAGATCTGTGACGCGCTCTTGGGTAGAGCACACGTTGCTGGGCGTGCGCTTGAAAAGAGCCTAAGAAGAGGGGGCGTCTGGAAGGAACCGCAACGCCAAGGGAGGGTGTCCAGCCTTCCCGCTTCAACACCTGGACACATTCTGGAAAGTTTCCTAAGAAAGCCAGAAAAATAATTTAAAAAAAAATCCAGAGGCCAGACGGGCTAATGGGGCTTTACTGCGACTATCTGGCTTAATCCTCCAAACAACCTTGCCATACCAGCCCATCAGTCCTCTGAGACAGGTGAAGAACCTGAGGTCGCAGGAGGACACCCAGAAGGTCCAGAGAGAGCCTCCTAGGCCCCCCACCTCCCCCCGTGGCAGCTCCAACCCCAGCTTTTTCACTAGTAAGGCAGTCGGGCCCCTGGGCCACGCCCACTCCCCCAAGCGGGGAAGGAGCTTCGCGCTGCCGCTTGGCTGGGGACTGGGCACCGCCCTCCCGCGGCTCCTGAGCCGGCTGCCACCAGGGGGCGCGCCAGCGGTGTCCGGGAGCCTAGCGGCGCGTGTGCAGCGGCCAGTGCACCTGCTCTGGCCCTCGCCGCGGTCTCTGCCAGGACCCCGACGCCCAGCCTGACCCTGCCATTCAGCGGGGCTGCGGCTCCACGGCCTGCGACAGCAGCCCCACCTGGCATTCAGCGCGCTCCCGGGGGCAGAGGTCGCGGTGTCCTCACGCTGTGGTGCCGGCCTACAACCCCCACGCCGGGCTCGGGCCCGGCGGAGGAGGGCGATGCTCCCCGGGTAGGACAAACCGGTCACCTGGGCTGCGACGGCGGCTTAGGGGCAGAAGCGGCGGTCCAGGGCCGCCTGGCGCAGCAGCCTGTCCCAGCCGCGGTCCCTGCAGTCCCTCCCTGGCGGCTGCGCAGCCGTCCCACGACAGGGGCCATAAACTCTCCAGAGCGGAAAGCCGCACCCTGGTGGCCCGGCCCCGCGCCCAGACCTGGCGGCCGCTGGCACCTGACCCGCTGCATGGGTCTCCAGGGAGCTCGCTGCCCACCCGGCGCTGCAGGCTCGGCTCCCTCGTACACTCTCTGGTAGGTGCTAGGGACGACCCTATGGGCCAGCTTGCCATGCCCAGTCCCCAGGCCGCACCCACCCTGGCTCCCTGGGCTAGGGGACTGGCTCCTCCTGTGAGTCGTGGGTCTGGGAGGCAGGGGCGTTAGGGGAGAGTGAGGGACCGAGGGCAGCCCCTGCTGTGTGCACAGCGAGGTCGTGCACAGGCGTCTGTTGCAGAGCGTGCAGCTTCAGATGAGACTGGATTGCAGGTGGAGATGACTGTGGGTGCGCACACCTGGAGGTGAAGGGGAGGCAGCCTGTCTACCTGACCCATGAAATACAGGAGACTGTACCCCAGAAGCAGCGGGTTCACTGCTCCATTGATTAAGCAAGTCTGGGACACACATGTAGCTAAGCTGTGAGTTCTGTACCAGCGATCCCAACACCCACGCCCTCAGAAAGACACTGGTGTGGGGCCTGGGTGCTTGTCAGGCCTGAAAGTGGAGAGCACGGGCCAGAGACACTGAGTAGGGGGAACCCACCCTAGGGCTCTGAGGGACGACGATGTGGGGAGCTGGTGACAGAGCCTGAGCTGGCCCAATGTTGCACGGTGGGGACAGATTCGAGGTACAGTGGGGACTGGTGACCTCAGTTCCCAGTGTCCCAGCCTGGCCTCCCAGTCCACCCAGCAATTAGTGGGTGCTGCCCTGCAAAGACTCTGGGGGTGCCTCAGCCCTCCTCATCACACGTGACTGGTGACTTCTGTGTCCACCCGCACAATAAGAGGGATCTTCTCTCACTTTCAGGCAAGCCCAAGAAAGTCAGGGGCCTATGTGAGCCAAAGAGGAGAGAAGGTGATGCCTCAGCCCAGTGTTTCTGCCCCACCTCGCTTGTGGCCTTCGGAACTTGATTTGCACCGCAGGAAAATGGGCAATGAAAACCCCTCCCTAACTGGCTTCTCAGTCCACTCTGACCAGCCCACTGCACAGCGCCCACCCTGCAGCTCCAGGTACAGAGGCTGGGATGGCTCTGGGCTGACCTAAGGGCCTTCTGATGGCTCCAACCCTCGGGATGCCTCATGCTCACCCTTTGGCACCCACCTGACAGCTCAGCATCTCTGCTCTCTGCCATCCTCAATGCCTGCTCTAGACAAGCCCAAGTCCCCCAGGAGTGGCAGAGGGAACTGAGCCGAAAACTAAGTCTCGGCTCACTGAACCCCAAGTGGGCTGTCCAGCCTCGCCCTTCAGTTCACAACCCCAGGCAGGTTCCCTCCAGGGATGTGATCCCAGGGGCCACAGCAGCACATTCTGGCCTAACCTATCCACTATTTAAACAGTTACTGAAAAGGCCAGGATGGCCGTGGGCCCTGACATTAATCCCCTTTCTCTGTGAGGGGGCTGGGTTGGGTTTGCCATCCTGATGTCTTTGTGGAAAGAGCTGGCAGGTGAAGCAAGTCTCAGGGGCCAGCCATGGGACAAGGAACCTAGGACTGGCCTCTGCTGGAACCCTCTGAGGCCCCTGCGGACAGGAGGATCCAATGGAGGTCTAGCCACCCCTCCCAGGTTGGTGCTCACAGCCCCTCCCTGGCCCACTCCCTGCACACCTGCACCTGCTGGTCTCTGGGAGAGGAGCATCCATCCATCTTGTGCGCATAGCTTTCGGCTCCATTTTCATGAGGATGGTCTCCTTGGCAGAAATGCCCATTAGGGGATCCTGAGCCTGTGCTAGCTCTTCTCTAAGTGCCAAAGCCAGTGAGAGGGACTTGAAAACTCAAGACTTATTAACAGTATTTTCTGCATTTTGTGCTTTCAGGGTTGTTTTTTCCTTAAAATGTGTAAAAACAAACATTGAGATTTCTATCTTTTATATAATTTGGATTCTGTTATCACACGGACTTTTCCTGAAATTTATTTTTATGTATGTATATCAAACATTGAATTTCTGTTTTCTTCTTTACTGGAATTGTTAACTGTTTTATAGGCCAAATCTTTTAAAAAAAACACATCTCTCTAATTTCTCTAAACATTTCTAATTACATATATATTTACTATACCTAATACACTACTTTGGAATTCCTTGAGGCCTAAATGCATCGGGGTGCTCTGGTTTTGTTGTTGTTATTTCTGAATGACATTTACTTTGGTGCTCTTTATTTTGCGTATTTAAAACTATTAGATCGTGTGATTATATTTGACAGGTCTTAATTGACGCGCTGTTCAGCCCTTTGAGTTCGGTTGAGTTTTGGGTTGGAGAATTTTCTTCCACAAGGGATTGTCTTGGATTTTTCTGTTTCTCCCTCAATATCCACCTGGAAAACATTTCAATTAATTTATATTTACTTAAATATTTCTGTGCAAAAACTGTGTACAAAAGCCCCAAAGCATAATTTGTGCAGTTGAGCGCATGTTCTGTTGTTCAGCATTTATGGTGGTTGGTAGTGGAAAAGATTTTTAGAATATGTGGATTTTCGGGATATTCCCAGAAGCCCAGATAGCGACACTTTACCTTTGGAGGAATTACTTCTCAGAATATTGCACACAATCAATCGCCTTTGGAAGGAGCATATATCCCCAGCAAAAGCTCTGGTTTTTTGAAGTCTGTATTGTGTGTTACTTCCAGGAGAATATGCAATGATGACAATGTTATTAGATGATTCAAATATGAAGTGCTGTTATGCCAAACAATGAATCTTTGTGTTATACATTATGCCTAACTATAAATCTTTGTGTTATACATTTTAATGTCATTGGAGAGTACTCCTGTCTTCTTGGCATTATTGATAATTAGATTCTAATTGCTAATAAGTCAGAAAAATTAGGAACACCAAATTTCAGTTGTCTCAAAAGCACTCCTCTTATTAAATTTGGATGTTTACCTTTATCACATCAAAAGAAATATTGTTAGAAAGGTGTTTAATGTTTTGCAGATGGATAGATTACTGTTATTAGTTCTCATTTCATTGTTAATTTTTAAAACCATAAGGTTGGAAGTATCAATATGCCTTTCAATATACCTTAGTGGAATTTATTAAATTTTCATGGATGTCCTTTAGGGGGTTCAGGAAGTTATTTCTATTGCTAGATTTCTGGAAGATTTATCAGGAATGAGTGTCAGACATTGTCAGACGTCCATTGAAATCATCATGGTCTTTTCCTTTATTCTATTAATATGATGTATTACACTGATTGATTTTTAAATTTGTATTGGTAGGATAATTCCACTTGGTTATATTGTCTAACTTTTTTCTAATTTTCTTTCATTTTTATTACAGATGAGGCCTCACTCTGTCACCCAGGTTGGGGTGGAGTGGCACAGTCACAGCTCACTATAACCTCAAGCTCCTGGGCTCAAGTGATCCTGCCACCTCAGCCTCCTAAGTAGCTGGAACTACAGATGTGCACTGCCATGCCAGGCTTGTCTAACATTTTTATGTGTTGCTTCATCCAGTTTGCTAGAGTTTTTGGAGATTTCTGTCTTCATTCATGAGGGATAATAGTCTGCACTTTTATTTTCTTGTGATACTTTTGTCTGATTTGTTATCTGGGTAATACTGGCCTTGAAAATGAATTGATGTTTTCCTGCTTCTCTGCTTTGCAAGTGTTTGTGAAGGATTGGTTATTCATTAAGTGTTTAATAGAATTCACTAGTGAAGCTATGTGAGCCAGGGCTAGACTGATGAAGAGTTTTCATTAGTCTAATCTGTTTACTTGCTGTATAAGTACGCATATATTCTCTTTCTTCTTGATTTAATTTTACACTTTGTGTATAGCAGGGAATCTGTGTCTAATTTGTAGTATTTCATGCTTCTAGGTTTTCATGGCAGTTGAGATGTAAGAATAACAATAATGTTGGGAGAAGGAAGTTGTGGACAATCCATGAATATCCCAACATCTGTTGTAGGAAGGTTAAGATTACTTTTTTTTTTTTTGCTGTACTGAACTGAATACTCTTATTTATAATGTCAGACAAATGTAATGTTGTATATAAATAGAACTAGGAAAATGTGCCATTTGTCTTAGTATTTAATCAAGATGGAAGTCTGGGCCTACCTCCTCTCTTTTATTAATATGTAGACAGGACACCAACACAAATTAGAATGAAGACAAACAAAATGTTAGCAAATGAAGAATGGTATCAATTGGTTAAAATGTGATGAAATAGAGTGGTGAATATTTACATAGAATCCATGATGTGTTAGGTGCTATTTCAAGCTATTTGCACATATAGTTTTAATACCAATGACGTTAAAATGTATAACACAAAGATTCATATAAATAAAAATTACAACATTGTAAATAATATTAGGTGACACTAAAACTGTCATAGAAATACACATTTATATAAAACATAAAGTAACATGAAGTATTAAATTTTAGAAACTTTGATTACTAATCAGATGAACAACTGATTAGCCTTTTTATCCAGTAAAAAAGGCATACATATTATTTTCAAATTCCAGAGACAAATATTTTAAATATTGAAGTTGAAGACCTAAAAATGTGTCACTGACCTCATGGAAGTAGATATTCACTAGGTGATATTTTCTAGGCTCTCTGAAATTATATCAGAAAAATGTGAATTAGAATATAACCCATAAATAATATCTGGCCACATACAAAGTAATTGAAGATCAATTTAAATGGCTATTGGATTAAGAAATAGGGACTGAGGTAAATTTGCAGTGTCAGGGAGGATCTAAGGAGGAAGCATTGACACTGGAGCCCAAGGACCTGGGATCACAGAACAGATTCTACCAGTGCTAACTTACTGCTCCACAGAAAACATCAATTCTGCTCATGCGCAGGTACAATTCATCAAGAAAGGAATTACAACTTCAGAAATGTGTTCAAAATATATCCATACTTTGACATATTAATGAAGTAATCACATTCTACACATAACTACTCCATATGGAATACTGGGGAGGAGGTGTTCCAAATAAAGAGACTGAGGATTTCTCATGAGAACTCAGTGTCTGCTAGAAAATATCTAAGTAAAATATTTTACTTATGTGGAAAGTGTGGATGTTTGTGCATCAAAAGTTTCAAGAATCCCTAAAATTTACAATGGAGATGAGGAGAAAATATCAGAATTTCCCAGCACCAGAAATAAGGCAAGAAAAAATTCAGAGGGGTTGTAAATGTGAAAAGCCAATGGCTGGTCACACAGCAACATTGATAACCTTGTGCCTGGACAACTAGAATAAATACATAAACATACACATTGAAAATATTTCCAATATTAGATCTCCCTCATGTGAGAACTAAATTATAAAGATTGAAGCATAGAAGAAAATAAGCTACCAGAATAAATTTGATTACACATAAATTTCTGATATTGAAACTGTCACAAATGTTTAAGTTGGTAGTGGAAGACAAAGGACATATAATCTTGGGAGTCCTAAGGCCCTGCCCACTGCCAGTCCCTCCACACTACTACAGCTGATGCTTTCTGGAAATCACCACCTCCTGGCAGGAGCCCAACCAGCACAAATATAGAGCATTAAACCACCAAAGCTAAGGAGGCTCACAGAGTCTATTGCACCCTTCACCACCTCCACTGGAACAGGCGCTGGTATCCATGGCTCAGAGACCCAAAGATGGTTCACATCACAGGGCTCTATGCAGACAACCCCCAGTACCAGCCCAAAGCCACGTAGACCTGCTGGGTGGCTAGACCCAGAAGAGAGACAACAATCAATGCACTTTGGCTTACAGGAAGCCATGCCCATAGGAAAAAGGGGAGAGTACTACGTCAAGGGAACACCCCGTGGGATGAAAGAGTCTGAACAACAGTCTTCAGCCCTAGACCTTTCCTCTGACAGAGTCTACCAAAATGAGAAGGAACCAGAAAACCAACCCTGGTAATCTGACAAAACAAGAATCTTCAACACCCCCCAAAAAATCACACCAGTTCATCACCAATGGATCCAAACAAAGAAGAAATCACTGATTCATCTAAAAAAAAATTCAGGTTAGTTATTAAGCTAATCAGGGAGGGGCCAGAGAAAGATGAAGCCCAATGCAAGAAAATCCAAAAAATGATACAATACGTGAAGGGAGAATTATTCAAGGAAATAGATAGCTTAAATAAAAAAATAAAAAATCAGGAAACTTTGGACGTACTTTTAGAAATGTGAAATGCTCTGGAAAGTCTCAGCAATAGAATTGAACAAGTAGAAGAAAGAAATTCAGAATTCGAAGACAAGGTCTTTGATTTAACCCAATCCAATAAAGACAAAGAAAAAAGAATAAGAAAATATGAGCAAAGTCTCCAAGGAGTCTGGCATTCTGTTAAATGATGAAACCTAACACTAATTGGTGTACCTGAGGAAGAAGTGAATTCTAAAAGCCAGGAAAACATATTTGGGAGAATAATCTAGGAAAACTTCCATGGCCTTGTGAGAGACCTAGACATCCAAATACAAGAACCACAAATAACACCTGGGAAATTCATCACAAAAAGATCTTAGCCTAGGCACATTGTCATTAGGTTATCCAAAGTTAAGACAAAGGAAAGAATCTTAAGAGCTGTGAGACAGAAGCACTAGGTAACCTATAAAGGAAAACCTGTCAAATTAACAGCAGATTTCACAGCAGGAACCTTACAAGCTAGATGGGATTGGGGCCCTTTCTTCAGCCTCCTCAAACAAAACAATTATCAGCCAAGAATTTTGTATCCAGCAAAACTAAACATCATATATGAAGGAAAGATACAGTCATTTTCAGACAAACAAATGCTGACAGAATTTGCCATTACCAAGCCAGGACTCTAAGAACTGCTAAAAGGAGCTCTAAATCATGAAACAAATCCTGGAAACACATCAAAACAGAACTTCATTAACGCATAAATCACACAGGACCTATAAAACAAAAATACAAGTTAAAAAACAAAAACAAAGTACAGAGGCAACAAAGAGCATGATGAAAGCAATGGTACCTCACTTTTTAATACTAATGTTGGTTGTAAATGGCTTAAATGCTCCACTTACAAGATACAGAACCACAGAATGGATAACAACTCACCAACTAACTATCTGCTGCCTTCAGGAGACTCACCTAACACATAACGACTTACATAAACTTAAGGAAAGTGGTAGAAAAAGGCATTTCATGCAAATGGACACCAAAAGCAAGCAGCAGTAACTATTCTCATATGAGACAAAACAAACTTTAAAGCAACAGTAGCTAAAAGAGACAAAGAGAGACAGTATATCATCTGTCACCTGACAGTCTCATCCAACAGAAAAATATGACAATCCTAAACATATGTGAACCTAACACTGGAGCTCCCAAATTTATAAAACAATTACTAGTAGACATAAGAAATAAGATAGACAGCAACACAATAATAGTGGGGGACTTCAATACTCCACTGACAGCACTAGACAGGTCATCAAGACAGAAAGTCAACAAAGAAACAATGGATTTAAACTATACTTTGGAACAAATGGACTTAACAGATATATATAGAACATTTCATCCAACAACCACAGAATACACATTCTATTCAACAGCACATGGAATTTTCTCCAAGATAGACCATATGATAGGCCATAAAATGAGTCTCAATAAATTTAAGAAAATTGAAATTGTATCACGCACTCTCTCACATCACAATGGAATAAAACTGAAAATCAACTCCAAAAGGAATCTTCGAAACCATGCAAATACATGGAAATTAAATAACCTGCTCCTGAATGAGCATTGGGTGAAAAACGAAATCAAGATGGAAATGTAAAAAATTTCTTCGAACTGGATGACACAACCTATCAAGACCTCTGGGATACAGCAAAGGCAGTGCTAAGAGGAAAGTTTATAGCACTAAACACCTACGTCGAAAAGTCTGAAAGAGCACAGACAATCTAAGTTCACATCTCAGGGAACTAGAGAAGGAGGAACAAGCCAAACCCAATCCCAGCAAACAAAGGAAATAACCAAGATCAGAGCAGAACTAAATGAAATTGACACAACAACAACAACAACAAAAATACAAAACATAAATAAAACAAAAATTTGGTTATTTGAAAAGATA";
//int a = findAllGenes(dna);
String dna ="ATGTGAATGATAAATGTAGTAA";
System.out.println("nombre de genes"+findAllGenes(dna));
}
public static int findStopCodon(String stopCodon,String dna, int startIndex)
{
int stopIndex = dna.indexOf(stopCodon, startIndex+3);
while (stopIndex != -1)
{
if((stopIndex-startIndex)%3 == 0)
{
return stopIndex;
}
else
{
stopIndex = dna.indexOf(stopCodon, stopIndex+1);
}
}
return -1;
}
public static String writeGene(String dna,int where)
{
int startIndex = dna.indexOf("ATG",where);
if(startIndex == -1) {return "";}
int taaCodon = findStopCodon("TAA",dna,startIndex);
int tgaCodon = findStopCodon("TGA",dna,startIndex);
int tagCodon = findStopCodon("TAG",dna,startIndex);
int minIndex = 0;
if(taaCodon == -1 || (tgaCodon!=-1 && tgaCodon<taaCodon)) {
minIndex = tgaCodon;
}
else {minIndex = taaCodon;}
if(minIndex==-1 || (tagCodon!=-1 && tagCodon < minIndex)) {
minIndex = tagCodon;
}
if(minIndex== -1) {return "";}
return dna.substring(startIndex,minIndex+3);
}
public static int findAllGenes(String dna)
{
String gene = "";
int startIndex = 0;
int count = 0;
while(true) {
if(testGene(dna)==1) {
gene = writeGene(dna,startIndex);
count +=1;
System.out.println(gene);
startIndex = dna.indexOf("ATG",dna.indexOf(gene))+gene.length();
}
else {
System.out.println("failed");
break;
}
}
return count;
}
public static int testGene(String dna) {
int a=0 ;
for(int i=0; i<dna.length(); i++) {
if(dna.charAt(i) == 'A' || dna.charAt(i) == 'T' || dna.charAt(i) == 'G' || dna.charAt(i) == 'C' )
{a = 1;}
else
{a = -1;
break;
}
}
return a;
}
}
TOTAL GENES = 69
Total number of strings with length greater than 60 : 23
Total number of strings with CG Ratio greater than 0.35 : 40
Longest gene length is : 489
Total number of occurances of CTG is : 224
Cheers!Wrong answer
it is the correct answer it worked with me i passed it with 90%
yes this is the correct answer , worked for me and passed with 100% can u please share your code ? @citoyenu
public class Training {
public static void main(String[] args) {
//String dna="AACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTTCTAACTGGACTCTGACCCTGATTGTTGAGGGCTGCAAAGAGGAAGAATTTTATTTACCGTCGCTGTGGCCCCGAGTTGTCCCAAAGCGAGGTAATGCCCGCAAGGTCTGTGCTGATCAGGACGCAGCTCTGCCTTCGGGGTGCCCCTGGACTGCCCGCCCGCCCGGGTCTGTGCTGAGGAGAACGCTGCTCCGCCTCCGCGGTACTCCGGACATATGTGCAGAGAAGAACGCAGCTGCGCCCTCGCCATGCTCTGCGAGTCTCTGCTGATGAGAACACAGCTTCACTTTCGCAAAGGCGCAGCGCCGGCGCAGGCGCGGAGGGGCGCGCAGCGCCGGCGCAGGCGCGGAGGGGCGCGCCCGAACCCGAACCCTAATGCCGTCATAAGAGCCCTAGGGAGACCTTAGGGAACAAGCATTAAACTGACACTCGATTCTGTAGCCGGCTCTGCCAAGAGACATGGCGTTGCGGTGATATGAGGGCAGGGGTCATGGAAGAAAGCCTTCTGGTTTTAGACCCACAGGAAGATCTGTGACGCGCTCTTGGGTAGAGCACACGTTGCTGGGCGTGCGCTTGAAAAGAGCCTAAGAAGAGGGGGCGTCTGGAAGGAACCGCAACGCCAAGGGAGGGTGTCCAGCCTTCCCGCTTCAACACCTGGACACATTCTGGAAAGTTTCCTAAGAAAGCCAGAAAAATAATTTAAAAAAAAATCCAGAGGCCAGACGGGCTAATGGGGCTTTACTGCGACTATCTGGCTTAATCCTCCAAACAACCTTGCCATACCAGCCCATCAGTCCTCTGAGACAGGTGAAGAACCTGAGGTCGCAGGAGGACACCCAGAAGGTCCAGAGAGAGCCTCCTAGGCCCCCCACCTCCCCCCGTGGCAGCTCCAACCCCAGCTTTTTCACTAGTAAGGCAGTCGGGCCCCTGGGCCACGCCCACTCCCCCAAGCGGGGAAGGAGCTTCGCGCTGCCGCTTGGCTGGGGACTGGGCACCGCCCTCCCGCGGCTCCTGAGCCGGCTGCCACCAGGGGGCGCGCCAGCGGTGTCCGGGAGCCTAGCGGCGCGTGTGCAGCGGCCAGTGCACCTGCTCTGGCCCTCGCCGCGGTCTCTGCCAGGACCCCGACGCCCAGCCTGACCCTGCCATTCAGCGGGGCTGCGGCTCCACGGCCTGCGACAGCAGCCCCACCTGGCATTCAGCGCGCTCCCGGGGGCAGAGGTCGCGGTGTCCTCACGCTGTGGTGCCGGCCTACAACCCCCACGCCGGGCTCGGGCCCGGCGGAGGAGGGCGATGCTCCCCGGGTAGGACAAACCGGTCACCTGGGCTGCGACGGCGGCTTAGGGGCAGAAGCGGCGGTCCAGGGCCGCCTGGCGCAGCAGCCTGTCCCAGCCGCGGTCCCTGCAGTCCCTCCCTGGCGGCTGCGCAGCCGTCCCACGACAGGGGCCATAAACTCTCCAGAGCGGAAAGCCGCACCCTGGTGGCCCGGCCCCGCGCCCAGACCTGGCGGCCGCTGGCACCTGACCCGCTGCATGGGTCTCCAGGGAGCTCGCTGCCCACCCGGCGCTGCAGGCTCGGCTCCCTCGTACACTCTCTGGTAGGTGCTAGGGACGACCCTATGGGCCAGCTTGCCATGCCCAGTCCCCAGGCCGCACCCACCCTGGCTCCCTGGGCTAGGGGACTGGCTCCTCCTGTGAGTCGTGGGTCTGGGAGGCAGGGGCGTTAGGGGAGAGTGAGGGACCGAGGGCAGCCCCTGCTGTGTGCACAGCGAGGTCGTGCACAGGCGTCTGTTGCAGAGCGTGCAGCTTCAGATGAGACTGGATTGCAGGTGGAGATGACTGTGGGTGCGCACACCTGGAGGTGAAGGGGAGGCAGCCTGTCTACCTGACCCATGAAATACAGGAGACTGTACCCCAGAAGCAGCGGGTTCACTGCTCCATTGATTAAGCAAGTCTGGGACACACATGTAGCTAAGCTGTGAGTTCTGTACCAGCGATCCCAACACCCACGCCCTCAGAAAGACACTGGTGTGGGGCCTGGGTGCTTGTCAGGCCTGAAAGTGGAGAGCACGGGCCAGAGACACTGAGTAGGGGGAACCCACCCTAGGGCTCTGAGGGACGACGATGTGGGGAGCTGGTGACAGAGCCTGAGCTGGCCCAATGTTGCACGGTGGGGACAGATTCGAGGTACAGTGGGGACTGGTGACCTCAGTTCCCAGTGTCCCAGCCTGGCCTCCCAGTCCACCCAGCAATTAGTGGGTGCTGCCCTGCAAAGACTCTGGGGGTGCCTCAGCCCTCCTCATCACACGTGACTGGTGACTTCTGTGTCCACCCGCACAATAAGAGGGATCTTCTCTCACTTTCAGGCAAGCCCAAGAAAGTCAGGGGCCTATGTGAGCCAAAGAGGAGAGAAGGTGATGCCTCAGCCCAGTGTTTCTGCCCCACCTCGCTTGTGGCCTTCGGAACTTGATTTGCACCGCAGGAAAATGGGCAATGAAAACCCCTCCCTAACTGGCTTCTCAGTCCACTCTGACCAGCCCACTGCACAGCGCCCACCCTGCAGCTCCAGGTACAGAGGCTGGGATGGCTCTGGGCTGACCTAAGGGCCTTCTGATGGCTCCAACCCTCGGGATGCCTCATGCTCACCCTTTGGCACCCACCTGACAGCTCAGCATCTCTGCTCTCTGCCATCCTCAATGCCTGCTCTAGACAAGCCCAAGTCCCCCAGGAGTGGCAGAGGGAACTGAGCCGAAAACTAAGTCTCGGCTCACTGAACCCCAAGTGGGCTGTCCAGCCTCGCCCTTCAGTTCACAACCCCAGGCAGGTTCCCTCCAGGGATGTGATCCCAGGGGCCACAGCAGCACATTCTGGCCTAACCTATCCACTATTTAAACAGTTACTGAAAAGGCCAGGATGGCCGTGGGCCCTGACATTAATCCCCTTTCTCTGTGAGGGGGCTGGGTTGGGTTTGCCATCCTGATGTCTTTGTGGAAAGAGCTGGCAGGTGAAGCAAGTCTCAGGGGCCAGCCATGGGACAAGGAACCTAGGACTGGCCTCTGCTGGAACCCTCTGAGGCCCCTGCGGACAGGAGGATCCAATGGAGGTCTAGCCACCCCTCCCAGGTTGGTGCTCACAGCCCCTCCCTGGCCCACTCCCTGCACACCTGCACCTGCTGGTCTCTGGGAGAGGAGCATCCATCCATCTTGTGCGCATAGCTTTCGGCTCCATTTTCATGAGGATGGTCTCCTTGGCAGAAATGCCCATTAGGGGATCCTGAGCCTGTGCTAGCTCTTCTCTAAGTGCCAAAGCCAGTGAGAGGGACTTGAAAACTCAAGACTTATTAACAGTATTTTCTGCATTTTGTGCTTTCAGGGTTGTTTTTTCCTTAAAATGTGTAAAAACAAACATTGAGATTTCTATCTTTTATATAATTTGGATTCTGTTATCACACGGACTTTTCCTGAAATTTATTTTTATGTATGTATATCAAACATTGAATTTCTGTTTTCTTCTTTACTGGAATTGTTAACTGTTTTATAGGCCAAATCTTTTAAAAAAAACACATCTCTCTAATTTCTCTAAACATTTCTAATTACATATATATTTACTATACCTAATACACTACTTTGGAATTCCTTGAGGCCTAAATGCATCGGGGTGCTCTGGTTTTGTTGTTGTTATTTCTGAATGACATTTACTTTGGTGCTCTTTATTTTGCGTATTTAAAACTATTAGATCGTGTGATTATATTTGACAGGTCTTAATTGACGCGCTGTTCAGCCCTTTGAGTTCGGTTGAGTTTTGGGTTGGAGAATTTTCTTCCACAAGGGATTGTCTTGGATTTTTCTGTTTCTCCCTCAATATCCACCTGGAAAACATTTCAATTAATTTATATTTACTTAAATATTTCTGTGCAAAAACTGTGTACAAAAGCCCCAAAGCATAATTTGTGCAGTTGAGCGCATGTTCTGTTGTTCAGCATTTATGGTGGTTGGTAGTGGAAAAGATTTTTAGAATATGTGGATTTTCGGGATATTCCCAGAAGCCCAGATAGCGACACTTTACCTTTGGAGGAATTACTTCTCAGAATATTGCACACAATCAATCGCCTTTGGAAGGAGCATATATCCCCAGCAAAAGCTCTGGTTTTTTGAAGTCTGTATTGTGTGTTACTTCCAGGAGAATATGCAATGATGACAATGTTATTAGATGATTCAAATATGAAGTGCTGTTATGCCAAACAATGAATCTTTGTGTTATACATTATGCCTAACTATAAATCTTTGTGTTATACATTTTAATGTCATTGGAGAGTACTCCTGTCTTCTTGGCATTATTGATAATTAGATTCTAATTGCTAATAAGTCAGAAAAATTAGGAACACCAAATTTCAGTTGTCTCAAAAGCACTCCTCTTATTAAATTTGGATGTTTACCTTTATCACATCAAAAGAAATATTGTTAGAAAGGTGTTTAATGTTTTGCAGATGGATAGATTACTGTTATTAGTTCTCATTTCATTGTTAATTTTTAAAACCATAAGGTTGGAAGTATCAATATGCCTTTCAATATACCTTAGTGGAATTTATTAAATTTTCATGGATGTCCTTTAGGGGGTTCAGGAAGTTATTTCTATTGCTAGATTTCTGGAAGATTTATCAGGAATGAGTGTCAGACATTGTCAGACGTCCATTGAAATCATCATGGTCTTTTCCTTTATTCTATTAATATGATGTATTACACTGATTGATTTTTAAATTTGTATTGGTAGGATAATTCCACTTGGTTATATTGTCTAACTTTTTTCTAATTTTCTTTCATTTTTATTACAGATGAGGCCTCACTCTGTCACCCAGGTTGGGGTGGAGTGGCACAGTCACAGCTCACTATAACCTCAAGCTCCTGGGCTCAAGTGATCCTGCCACCTCAGCCTCCTAAGTAGCTGGAACTACAGATGTGCACTGCCATGCCAGGCTTGTCTAACATTTTTATGTGTTGCTTCATCCAGTTTGCTAGAGTTTTTGGAGATTTCTGTCTTCATTCATGAGGGATAATAGTCTGCACTTTTATTTTCTTGTGATACTTTTGTCTGATTTGTTATCTGGGTAATACTGGCCTTGAAAATGAATTGATGTTTTCCTGCTTCTCTGCTTTGCAAGTGTTTGTGAAGGATTGGTTATTCATTAAGTGTTTAATAGAATTCACTAGTGAAGCTATGTGAGCCAGGGCTAGACTGATGAAGAGTTTTCATTAGTCTAATCTGTTTACTTGCTGTATAAGTACGCATATATTCTCTTTCTTCTTGATTTAATTTTACACTTTGTGTATAGCAGGGAATCTGTGTCTAATTTGTAGTATTTCATGCTTCTAGGTTTTCATGGCAGTTGAGATGTAAGAATAACAATAATGTTGGGAGAAGGAAGTTGTGGACAATCCATGAATATCCCAACATCTGTTGTAGGAAGGTTAAGATTACTTTTTTTTTTTTTGCTGTACTGAACTGAATACTCTTATTTATAATGTCAGACAAATGTAATGTTGTATATAAATAGAACTAGGAAAATGTGCCATTTGTCTTAGTATTTAATCAAGATGGAAGTCTGGGCCTACCTCCTCTCTTTTATTAATATGTAGACAGGACACCAACACAAATTAGAATGAAGACAAACAAAATGTTAGCAAATGAAGAATGGTATCAATTGGTTAAAATGTGATGAAATAGAGTGGTGAATATTTACATAGAATCCATGATGTGTTAGGTGCTATTTCAAGCTATTTGCACATATAGTTTTAATACCAATGACGTTAAAATGTATAACACAAAGATTCATATAAATAAAAATTACAACATTGTAAATAATATTAGGTGACACTAAAACTGTCATAGAAATACACATTTATATAAAACATAAAGTAACATGAAGTATTAAATTTTAGAAACTTTGATTACTAATCAGATGAACAACTGATTAGCCTTTTTATCCAGTAAAAAAGGCATACATATTATTTTCAAATTCCAGAGACAAATATTTTAAATATTGAAGTTGAAGACCTAAAAATGTGTCACTGACCTCATGGAAGTAGATATTCACTAGGTGATATTTTCTAGGCTCTCTGAAATTATATCAGAAAAATGTGAATTAGAATATAACCCATAAATAATATCTGGCCACATACAAAGTAATTGAAGATCAATTTAAATGGCTATTGGATTAAGAAATAGGGACTGAGGTAAATTTGCAGTGTCAGGGAGGATCTAAGGAGGAAGCATTGACACTGGAGCCCAAGGACCTGGGATCACAGAACAGATTCTACCAGTGCTAACTTACTGCTCCACAGAAAACATCAATTCTGCTCATGCGCAGGTACAATTCATCAAGAAAGGAATTACAACTTCAGAAATGTGTTCAAAATATATCCATACTTTGACATATTAATGAAGTAATCACATTCTACACATAACTACTCCATATGGAATACTGGGGAGGAGGTGTTCCAAATAAAGAGACTGAGGATTTCTCATGAGAACTCAGTGTCTGCTAGAAAATATCTAAGTAAAATATTTTACTTATGTGGAAAGTGTGGATGTTTGTGCATCAAAAGTTTCAAGAATCCCTAAAATTTACAATGGAGATGAGGAGAAAATATCAGAATTTCCCAGCACCAGAAATAAGGCAAGAAAAAATTCAGAGGGGTTGTAAATGTGAAAAGCCAATGGCTGGTCACACAGCAACATTGATAACCTTGTGCCTGGACAACTAGAATAAATACATAAACATACACATTGAAAATATTTCCAATATTAGATCTCCCTCATGTGAGAACTAAATTATAAAGATTGAAGCATAGAAGAAAATAAGCTACCAGAATAAATTTGATTACACATAAATTTCTGATATTGAAACTGTCACAAATGTTTAAGTTGGTAGTGGAAGACAAAGGACATATAATCTTGGGAGTCCTAAGGCCCTGCCCACTGCCAGTCCCTCCACACTACTACAGCTGATGCTTTCTGGAAATCACCACCTCCTGGCAGGAGCCCAACCAGCACAAATATAGAGCATTAAACCACCAAAGCTAAGGAGGCTCACAGAGTCTATTGCACCCTTCACCACCTCCACTGGAACAGGCGCTGGTATCCATGGCTCAGAGACCCAAAGATGGTTCACATCACAGGGCTCTATGCAGACAACCCCCAGTACCAGCCCAAAGCCACGTAGACCTGCTGGGTGGCTAGACCCAGAAGAGAGACAACAATCAATGCACTTTGGCTTACAGGAAGCCATGCCCATAGGAAAAAGGGGAGAGTACTACGTCAAGGGAACACCCCGTGGGATGAAAGAGTCTGAACAACAGTCTTCAGCCCTAGACCTTTCCTCTGACAGAGTCTACCAAAATGAGAAGGAACCAGAAAACCAACCCTGGTAATCTGACAAAACAAGAATCTTCAACACCCCCCAAAAAATCACACCAGTTCATCACCAATGGATCCAAACAAAGAAGAAATCACTGATTCATCTAAAAAAAAATTCAGGTTAGTTATTAAGCTAATCAGGGAGGGGCCAGAGAAAGATGAAGCCCAATGCAAGAAAATCCAAAAAATGATACAATACGTGAAGGGAGAATTATTCAAGGAAATAGATAGCTTAAATAAAAAAATAAAAAATCAGGAAACTTTGGACGTACTTTTAGAAATGTGAAATGCTCTGGAAAGTCTCAGCAATAGAATTGAACAAGTAGAAGAAAGAAATTCAGAATTCGAAGACAAGGTCTTTGATTTAACCCAATCCAATAAAGACAAAGAAAAAAGAATAAGAAAATATGAGCAAAGTCTCCAAGGAGTCTGGCATTCTGTTAAATGATGAAACCTAACACTAATTGGTGTACCTGAGGAAGAAGTGAATTCTAAAAGCCAGGAAAACATATTTGGGAGAATAATCTAGGAAAACTTCCATGGCCTTGTGAGAGACCTAGACATCCAAATACAAGAACCACAAATAACACCTGGGAAATTCATCACAAAAAGATCTTAGCCTAGGCACATTGTCATTAGGTTATCCAAAGTTAAGACAAAGGAAAGAATCTTAAGAGCTGTGAGACAGAAGCACTAGGTAACCTATAAAGGAAAACCTGTCAAATTAACAGCAGATTTCACAGCAGGAACCTTACAAGCTAGATGGGATTGGGGCCCTTTCTTCAGCCTCCTCAAACAAAACAATTATCAGCCAAGAATTTTGTATCCAGCAAAACTAAACATCATATATGAAGGAAAGATACAGTCATTTTCAGACAAACAAATGCTGACAGAATTTGCCATTACCAAGCCAGGACTCTAAGAACTGCTAAAAGGAGCTCTAAATCATGAAACAAATCCTGGAAACACATCAAAACAGAACTTCATTAACGCATAAATCACACAGGACCTATAAAACAAAAATACAAGTTAAAAAACAAAAACAAAGTACAGAGGCAACAAAGAGCATGATGAAAGCAATGGTACCTCACTTTTTAATACTAATGTTGGTTGTAAATGGCTTAAATGCTCCACTTACAAGATACAGAACCACAGAATGGATAACAACTCACCAACTAACTATCTGCTGCCTTCAGGAGACTCACCTAACACATAACGACTTACATAAACTTAAGGAAAGTGGTAGAAAAAGGCATTTCATGCAAATGGACACCAAAAGCAAGCAGCAGTAACTATTCTCATATGAGACAAAACAAACTTTAAAGCAACAGTAGCTAAAAGAGACAAAGAGAGACAGTATATCATCTGTCACCTGACAGTCTCATCCAACAGAAAAATATGACAATCCTAAACATATGTGAACCTAACACTGGAGCTCCCAAATTTATAAAACAATTACTAGTAGACATAAGAAATAAGATAGACAGCAACACAATAATAGTGGGGGACTTCAATACTCCACTGACAGCACTAGACAGGTCATCAAGACAGAAAGTCAACAAAGAAACAATGGATTTAAACTATACTTTGGAACAAATGGACTTAACAGATATATATAGAACATTTCATCCAACAACCACAGAATACACATTCTATTCAACAGCACATGGAATTTTCTCCAAGATAGACCATATGATAGGCCATAAAATGAGTCTCAATAAATTTAAGAAAATTGAAATTGTATCACGCACTCTCTCACATCACAATGGAATAAAACTGAAAATCAACTCCAAAAGGAATCTTCGAAACCATGCAAATACATGGAAATTAAATAACCTGCTCCTGAATGAGCATTGGGTGAAAAACGAAATCAAGATGGAAATGTAAAAAATTTCTTCGAACTGGATGACACAACCTATCAAGACCTCTGGGATACAGCAAAGGCAGTGCTAAGAGGAAAGTTTATAGCACTAAACACCTACGTCGAAAAGTCTGAAAGAGCACAGACAATCTAAGTTCACATCTCAGGGAACTAGAGAAGGAGGAACAAGCCAAACCCAATCCCAGCAAACAAAGGAAATAACCAAGATCAGAGCAGAACTAAATGAAATTGACACAACAACAACAACAACAAAAATACAAAACATAAATAAAACAAAAATTTGGTTATTTGAAAAGATA";
//int a = findAllGenes(dna);
String dna ="ATGTGAATGATAAATGTAGTAA";
System.out.println("nombre de genes"+findAllGenes(dna));
}
public static int findStopCodon(String stopCodon,String dna, int startIndex)
{
int stopIndex = dna.indexOf(stopCodon, startIndex+3);
while (stopIndex != -1)
{
if((stopIndex-startIndex)%3 == 0)
{
return stopIndex;
}
else
{
stopIndex = dna.indexOf(stopCodon, stopIndex+1);
}
}
return -1;
}
public static String writeGene(String dna,int where)
{
int startIndex = dna.indexOf("ATG",where);
if(startIndex == -1) {return "";}
int taaCodon = findStopCodon("TAA",dna,startIndex);
int tgaCodon = findStopCodon("TGA",dna,startIndex);
int tagCodon = findStopCodon("TAG",dna,startIndex);
int minIndex = 0;
if(taaCodon == -1 || (tgaCodon!=-1 && tgaCodon<taaCodon)) {
minIndex = tgaCodon;
}
else {minIndex = taaCodon;}
if(minIndex==-1 || (tagCodon!=-1 && tagCodon < minIndex)) {
minIndex = tagCodon;
}
if(minIndex== -1) {return "";}
return dna.substring(startIndex,minIndex+3);
}
public static int findAllGenes(String dna)
{
String gene = "";
int startIndex = 0;
int count = 0;
while(true) {
if(testGene(dna)==1) {
gene = writeGene(dna,startIndex);
count +=1;
System.out.println(gene);
startIndex = dna.indexOf("ATG",dna.indexOf(gene))+gene.length();
}
else {
System.out.println("failed");
break;
}
}
return count;
}
public static int testGene(String dna) {
int a=0 ;
for(int i=0; i<dna.length(); i++) {
if(dna.charAt(i) == 'A' || dna.charAt(i) == 'T' || dna.charAt(i) == 'G' || dna.charAt(i) == 'C' )
{a = 1;}
else
{a = -1;
break;
}
}
return a;
}
}
-- you can add your functions below 👍
Okay here are my answers
For Final Assignment Week 2
(NOTE: not the answer for practice quiz !!! )
TOTAL GENES = 69
Total number of strings with length greater than 60 : 23
Total number of strings with CG Ratio greater than 0.35 : 40
Longest gene length is : 489
Total number of occurances of CTG is : 224
Question 1 : turkey ,duck and quails
Question 2 :The method mystery is given a string and it returns a string which is the same string but with the first three T's removed.
Hope this clears the doubts !!!!...
Warning : Copying other's answer wont pay off your money and time efforts !!
GOOD LUCK!!!!
TOTAL GENES = 69
Total number of strings with length greater than 60 : 23
Total number of strings with CG Ratio greater than 0.35 : 40
Longest gene length is : 489
Total number of occurances of CTG is : 224
Cheers!Wrong answer
it is the correct answer it worked with me i passed it with 90%
yes this is the correct answer , worked for me and passed with 100% can u please share your code ? @citoyenu
public class Training {
public static void main(String[] args) { //String dna="AACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTTCTAACTGGACTCTGACCCTGATTGTTGAGGGCTGCAAAGAGGAAGAATTTTATTTACCGTCGCTGTGGCCCCGAGTTGTCCCAAAGCGAGGTAATGCCCGCAAGGTCTGTGCTGATCAGGACGCAGCTCTGCCTTCGGGGTGCCCCTGGACTGCCCGCCCGCCCGGGTCTGTGCTGAGGAGAACGCTGCTCCGCCTCCGCGGTACTCCGGACATATGTGCAGAGAAGAACGCAGCTGCGCCCTCGCCATGCTCTGCGAGTCTCTGCTGATGAGAACACAGCTTCACTTTCGCAAAGGCGCAGCGCCGGCGCAGGCGCGGAGGGGCGCGCAGCGCCGGCGCAGGCGCGGAGGGGCGCGCCCGAACCCGAACCCTAATGCCGTCATAAGAGCCCTAGGGAGACCTTAGGGAACAAGCATTAAACTGACACTCGATTCTGTAGCCGGCTCTGCCAAGAGACATGGCGTTGCGGTGATATGAGGGCAGGGGTCATGGAAGAAAGCCTTCTGGTTTTAGACCCACAGGAAGATCTGTGACGCGCTCTTGGGTAGAGCACACGTTGCTGGGCGTGCGCTTGAAAAGAGCCTAAGAAGAGGGGGCGTCTGGAAGGAACCGCAACGCCAAGGGAGGGTGTCCAGCCTTCCCGCTTCAACACCTGGACACATTCTGGAAAGTTTCCTAAGAAAGCCAGAAAAATAATTTAAAAAAAAATCCAGAGGCCAGACGGGCTAATGGGGCTTTACTGCGACTATCTGGCTTAATCCTCCAAACAACCTTGCCATACCAGCCCATCAGTCCTCTGAGACAGGTGAAGAACCTGAGGTCGCAGGAGGACACCCAGAAGGTCCAGAGAGAGCCTCCTAGGCCCCCCACCTCCCCCCGTGGCAGCTCCAACCCCAGCTTTTTCACTAGTAAGGCAGTCGGGCCCCTGGGCCACGCCCACTCCCCCAAGCGGGGAAGGAGCTTCGCGCTGCCGCTTGGCTGGGGACTGGGCACCGCCCTCCCGCGGCTCCTGAGCCGGCTGCCACCAGGGGGCGCGCCAGCGGTGTCCGGGAGCCTAGCGGCGCGTGTGCAGCGGCCAGTGCACCTGCTCTGGCCCTCGCCGCGGTCTCTGCCAGGACCCCGACGCCCAGCCTGACCCTGCCATTCAGCGGGGCTGCGGCTCCACGGCCTGCGACAGCAGCCCCACCTGGCATTCAGCGCGCTCCCGGGGGCAGAGGTCGCGGTGTCCTCACGCTGTGGTGCCGGCCTACAACCCCCACGCCGGGCTCGGGCCCGGCGGAGGAGGGCGATGCTCCCCGGGTAGGACAAACCGGTCACCTGGGCTGCGACGGCGGCTTAGGGGCAGAAGCGGCGGTCCAGGGCCGCCTGGCGCAGCAGCCTGTCCCAGCCGCGGTCCCTGCAGTCCCTCCCTGGCGGCTGCGCAGCCGTCCCACGACAGGGGCCATAAACTCTCCAGAGCGGAAAGCCGCACCCTGGTGGCCCGGCCCCGCGCCCAGACCTGGCGGCCGCTGGCACCTGACCCGCTGCATGGGTCTCCAGGGAGCTCGCTGCCCACCCGGCGCTGCAGGCTCGGCTCCCTCGTACACTCTCTGGTAGGTGCTAGGGACGACCCTATGGGCCAGCTTGCCATGCCCAGTCCCCAGGCCGCACCCACCCTGGCTCCCTGGGCTAGGGGACTGGCTCCTCCTGTGAGTCGTGGGTCTGGGAGGCAGGGGCGTTAGGGGAGAGTGAGGGACCGAGGGCAGCCCCTGCTGTGTGCACAGCGAGGTCGTGCACAGGCGTCTGTTGCAGAGCGTGCAGCTTCAGATGAGACTGGATTGCAGGTGGAGATGACTGTGGGTGCGCACACCTGGAGGTGAAGGGGAGGCAGCCTGTCTACCTGACCCATGAAATACAGGAGACTGTACCCCAGAAGCAGCGGGTTCACTGCTCCATTGATTAAGCAAGTCTGGGACACACATGTAGCTAAGCTGTGAGTTCTGTACCAGCGATCCCAACACCCACGCCCTCAGAAAGACACTGGTGTGGGGCCTGGGTGCTTGTCAGGCCTGAAAGTGGAGAGCACGGGCCAGAGACACTGAGTAGGGGGAACCCACCCTAGGGCTCTGAGGGACGACGATGTGGGGAGCTGGTGACAGAGCCTGAGCTGGCCCAATGTTGCACGGTGGGGACAGATTCGAGGTACAGTGGGGACTGGTGACCTCAGTTCCCAGTGTCCCAGCCTGGCCTCCCAGTCCACCCAGCAATTAGTGGGTGCTGCCCTGCAAAGACTCTGGGGGTGCCTCAGCCCTCCTCATCACACGTGACTGGTGACTTCTGTGTCCACCCGCACAATAAGAGGGATCTTCTCTCACTTTCAGGCAAGCCCAAGAAAGTCAGGGGCCTATGTGAGCCAAAGAGGAGAGAAGGTGATGCCTCAGCCCAGTGTTTCTGCCCCACCTCGCTTGTGGCCTTCGGAACTTGATTTGCACCGCAGGAAAATGGGCAATGAAAACCCCTCCCTAACTGGCTTCTCAGTCCACTCTGACCAGCCCACTGCACAGCGCCCACCCTGCAGCTCCAGGTACAGAGGCTGGGATGGCTCTGGGCTGACCTAAGGGCCTTCTGATGGCTCCAACCCTCGGGATGCCTCATGCTCACCCTTTGGCACCCACCTGACAGCTCAGCATCTCTGCTCTCTGCCATCCTCAATGCCTGCTCTAGACAAGCCCAAGTCCCCCAGGAGTGGCAGAGGGAACTGAGCCGAAAACTAAGTCTCGGCTCACTGAACCCCAAGTGGGCTGTCCAGCCTCGCCCTTCAGTTCACAACCCCAGGCAGGTTCCCTCCAGGGATGTGATCCCAGGGGCCACAGCAGCACATTCTGGCCTAACCTATCCACTATTTAAACAGTTACTGAAAAGGCCAGGATGGCCGTGGGCCCTGACATTAATCCCCTTTCTCTGTGAGGGGGCTGGGTTGGGTTTGCCATCCTGATGTCTTTGTGGAAAGAGCTGGCAGGTGAAGCAAGTCTCAGGGGCCAGCCATGGGACAAGGAACCTAGGACTGGCCTCTGCTGGAACCCTCTGAGGCCCCTGCGGACAGGAGGATCCAATGGAGGTCTAGCCACCCCTCCCAGGTTGGTGCTCACAGCCCCTCCCTGGCCCACTCCCTGCACACCTGCACCTGCTGGTCTCTGGGAGAGGAGCATCCATCCATCTTGTGCGCATAGCTTTCGGCTCCATTTTCATGAGGATGGTCTCCTTGGCAGAAATGCCCATTAGGGGATCCTGAGCCTGTGCTAGCTCTTCTCTAAGTGCCAAAGCCAGTGAGAGGGACTTGAAAACTCAAGACTTATTAACAGTATTTTCTGCATTTTGTGCTTTCAGGGTTGTTTTTTCCTTAAAATGTGTAAAAACAAACATTGAGATTTCTATCTTTTATATAATTTGGATTCTGTTATCACACGGACTTTTCCTGAAATTTATTTTTATGTATGTATATCAAACATTGAATTTCTGTTTTCTTCTTTACTGGAATTGTTAACTGTTTTATAGGCCAAATCTTTTAAAAAAAACACATCTCTCTAATTTCTCTAAACATTTCTAATTACATATATATTTACTATACCTAATACACTACTTTGGAATTCCTTGAGGCCTAAATGCATCGGGGTGCTCTGGTTTTGTTGTTGTTATTTCTGAATGACATTTACTTTGGTGCTCTTTATTTTGCGTATTTAAAACTATTAGATCGTGTGATTATATTTGACAGGTCTTAATTGACGCGCTGTTCAGCCCTTTGAGTTCGGTTGAGTTTTGGGTTGGAGAATTTTCTTCCACAAGGGATTGTCTTGGATTTTTCTGTTTCTCCCTCAATATCCACCTGGAAAACATTTCAATTAATTTATATTTACTTAAATATTTCTGTGCAAAAACTGTGTACAAAAGCCCCAAAGCATAATTTGTGCAGTTGAGCGCATGTTCTGTTGTTCAGCATTTATGGTGGTTGGTAGTGGAAAAGATTTTTAGAATATGTGGATTTTCGGGATATTCCCAGAAGCCCAGATAGCGACACTTTACCTTTGGAGGAATTACTTCTCAGAATATTGCACACAATCAATCGCCTTTGGAAGGAGCATATATCCCCAGCAAAAGCTCTGGTTTTTTGAAGTCTGTATTGTGTGTTACTTCCAGGAGAATATGCAATGATGACAATGTTATTAGATGATTCAAATATGAAGTGCTGTTATGCCAAACAATGAATCTTTGTGTTATACATTATGCCTAACTATAAATCTTTGTGTTATACATTTTAATGTCATTGGAGAGTACTCCTGTCTTCTTGGCATTATTGATAATTAGATTCTAATTGCTAATAAGTCAGAAAAATTAGGAACACCAAATTTCAGTTGTCTCAAAAGCACTCCTCTTATTAAATTTGGATGTTTACCTTTATCACATCAAAAGAAATATTGTTAGAAAGGTGTTTAATGTTTTGCAGATGGATAGATTACTGTTATTAGTTCTCATTTCATTGTTAATTTTTAAAACCATAAGGTTGGAAGTATCAATATGCCTTTCAATATACCTTAGTGGAATTTATTAAATTTTCATGGATGTCCTTTAGGGGGTTCAGGAAGTTATTTCTATTGCTAGATTTCTGGAAGATTTATCAGGAATGAGTGTCAGACATTGTCAGACGTCCATTGAAATCATCATGGTCTTTTCCTTTATTCTATTAATATGATGTATTACACTGATTGATTTTTAAATTTGTATTGGTAGGATAATTCCACTTGGTTATATTGTCTAACTTTTTTCTAATTTTCTTTCATTTTTATTACAGATGAGGCCTCACTCTGTCACCCAGGTTGGGGTGGAGTGGCACAGTCACAGCTCACTATAACCTCAAGCTCCTGGGCTCAAGTGATCCTGCCACCTCAGCCTCCTAAGTAGCTGGAACTACAGATGTGCACTGCCATGCCAGGCTTGTCTAACATTTTTATGTGTTGCTTCATCCAGTTTGCTAGAGTTTTTGGAGATTTCTGTCTTCATTCATGAGGGATAATAGTCTGCACTTTTATTTTCTTGTGATACTTTTGTCTGATTTGTTATCTGGGTAATACTGGCCTTGAAAATGAATTGATGTTTTCCTGCTTCTCTGCTTTGCAAGTGTTTGTGAAGGATTGGTTATTCATTAAGTGTTTAATAGAATTCACTAGTGAAGCTATGTGAGCCAGGGCTAGACTGATGAAGAGTTTTCATTAGTCTAATCTGTTTACTTGCTGTATAAGTACGCATATATTCTCTTTCTTCTTGATTTAATTTTACACTTTGTGTATAGCAGGGAATCTGTGTCTAATTTGTAGTATTTCATGCTTCTAGGTTTTCATGGCAGTTGAGATGTAAGAATAACAATAATGTTGGGAGAAGGAAGTTGTGGACAATCCATGAATATCCCAACATCTGTTGTAGGAAGGTTAAGATTACTTTTTTTTTTTTTGCTGTACTGAACTGAATACTCTTATTTATAATGTCAGACAAATGTAATGTTGTATATAAATAGAACTAGGAAAATGTGCCATTTGTCTTAGTATTTAATCAAGATGGAAGTCTGGGCCTACCTCCTCTCTTTTATTAATATGTAGACAGGACACCAACACAAATTAGAATGAAGACAAACAAAATGTTAGCAAATGAAGAATGGTATCAATTGGTTAAAATGTGATGAAATAGAGTGGTGAATATTTACATAGAATCCATGATGTGTTAGGTGCTATTTCAAGCTATTTGCACATATAGTTTTAATACCAATGACGTTAAAATGTATAACACAAAGATTCATATAAATAAAAATTACAACATTGTAAATAATATTAGGTGACACTAAAACTGTCATAGAAATACACATTTATATAAAACATAAAGTAACATGAAGTATTAAATTTTAGAAACTTTGATTACTAATCAGATGAACAACTGATTAGCCTTTTTATCCAGTAAAAAAGGCATACATATTATTTTCAAATTCCAGAGACAAATATTTTAAATATTGAAGTTGAAGACCTAAAAATGTGTCACTGACCTCATGGAAGTAGATATTCACTAGGTGATATTTTCTAGGCTCTCTGAAATTATATCAGAAAAATGTGAATTAGAATATAACCCATAAATAATATCTGGCCACATACAAAGTAATTGAAGATCAATTTAAATGGCTATTGGATTAAGAAATAGGGACTGAGGTAAATTTGCAGTGTCAGGGAGGATCTAAGGAGGAAGCATTGACACTGGAGCCCAAGGACCTGGGATCACAGAACAGATTCTACCAGTGCTAACTTACTGCTCCACAGAAAACATCAATTCTGCTCATGCGCAGGTACAATTCATCAAGAAAGGAATTACAACTTCAGAAATGTGTTCAAAATATATCCATACTTTGACATATTAATGAAGTAATCACATTCTACACATAACTACTCCATATGGAATACTGGGGAGGAGGTGTTCCAAATAAAGAGACTGAGGATTTCTCATGAGAACTCAGTGTCTGCTAGAAAATATCTAAGTAAAATATTTTACTTATGTGGAAAGTGTGGATGTTTGTGCATCAAAAGTTTCAAGAATCCCTAAAATTTACAATGGAGATGAGGAGAAAATATCAGAATTTCCCAGCACCAGAAATAAGGCAAGAAAAAATTCAGAGGGGTTGTAAATGTGAAAAGCCAATGGCTGGTCACACAGCAACATTGATAACCTTGTGCCTGGACAACTAGAATAAATACATAAACATACACATTGAAAATATTTCCAATATTAGATCTCCCTCATGTGAGAACTAAATTATAAAGATTGAAGCATAGAAGAAAATAAGCTACCAGAATAAATTTGATTACACATAAATTTCTGATATTGAAACTGTCACAAATGTTTAAGTTGGTAGTGGAAGACAAAGGACATATAATCTTGGGAGTCCTAAGGCCCTGCCCACTGCCAGTCCCTCCACACTACTACAGCTGATGCTTTCTGGAAATCACCACCTCCTGGCAGGAGCCCAACCAGCACAAATATAGAGCATTAAACCACCAAAGCTAAGGAGGCTCACAGAGTCTATTGCACCCTTCACCACCTCCACTGGAACAGGCGCTGGTATCCATGGCTCAGAGACCCAAAGATGGTTCACATCACAGGGCTCTATGCAGACAACCCCCAGTACCAGCCCAAAGCCACGTAGACCTGCTGGGTGGCTAGACCCAGAAGAGAGACAACAATCAATGCACTTTGGCTTACAGGAAGCCATGCCCATAGGAAAAAGGGGAGAGTACTACGTCAAGGGAACACCCCGTGGGATGAAAGAGTCTGAACAACAGTCTTCAGCCCTAGACCTTTCCTCTGACAGAGTCTACCAAAATGAGAAGGAACCAGAAAACCAACCCTGGTAATCTGACAAAACAAGAATCTTCAACACCCCCCAAAAAATCACACCAGTTCATCACCAATGGATCCAAACAAAGAAGAAATCACTGATTCATCTAAAAAAAAATTCAGGTTAGTTATTAAGCTAATCAGGGAGGGGCCAGAGAAAGATGAAGCCCAATGCAAGAAAATCCAAAAAATGATACAATACGTGAAGGGAGAATTATTCAAGGAAATAGATAGCTTAAATAAAAAAATAAAAAATCAGGAAACTTTGGACGTACTTTTAGAAATGTGAAATGCTCTGGAAAGTCTCAGCAATAGAATTGAACAAGTAGAAGAAAGAAATTCAGAATTCGAAGACAAGGTCTTTGATTTAACCCAATCCAATAAAGACAAAGAAAAAAGAATAAGAAAATATGAGCAAAGTCTCCAAGGAGTCTGGCATTCTGTTAAATGATGAAACCTAACACTAATTGGTGTACCTGAGGAAGAAGTGAATTCTAAAAGCCAGGAAAACATATTTGGGAGAATAATCTAGGAAAACTTCCATGGCCTTGTGAGAGACCTAGACATCCAAATACAAGAACCACAAATAACACCTGGGAAATTCATCACAAAAAGATCTTAGCCTAGGCACATTGTCATTAGGTTATCCAAAGTTAAGACAAAGGAAAGAATCTTAAGAGCTGTGAGACAGAAGCACTAGGTAACCTATAAAGGAAAACCTGTCAAATTAACAGCAGATTTCACAGCAGGAACCTTACAAGCTAGATGGGATTGGGGCCCTTTCTTCAGCCTCCTCAAACAAAACAATTATCAGCCAAGAATTTTGTATCCAGCAAAACTAAACATCATATATGAAGGAAAGATACAGTCATTTTCAGACAAACAAATGCTGACAGAATTTGCCATTACCAAGCCAGGACTCTAAGAACTGCTAAAAGGAGCTCTAAATCATGAAACAAATCCTGGAAACACATCAAAACAGAACTTCATTAACGCATAAATCACACAGGACCTATAAAACAAAAATACAAGTTAAAAAACAAAAACAAAGTACAGAGGCAACAAAGAGCATGATGAAAGCAATGGTACCTCACTTTTTAATACTAATGTTGGTTGTAAATGGCTTAAATGCTCCACTTACAAGATACAGAACCACAGAATGGATAACAACTCACCAACTAACTATCTGCTGCCTTCAGGAGACTCACCTAACACATAACGACTTACATAAACTTAAGGAAAGTGGTAGAAAAAGGCATTTCATGCAAATGGACACCAAAAGCAAGCAGCAGTAACTATTCTCATATGAGACAAAACAAACTTTAAAGCAACAGTAGCTAAAAGAGACAAAGAGAGACAGTATATCATCTGTCACCTGACAGTCTCATCCAACAGAAAAATATGACAATCCTAAACATATGTGAACCTAACACTGGAGCTCCCAAATTTATAAAACAATTACTAGTAGACATAAGAAATAAGATAGACAGCAACACAATAATAGTGGGGGACTTCAATACTCCACTGACAGCACTAGACAGGTCATCAAGACAGAAAGTCAACAAAGAAACAATGGATTTAAACTATACTTTGGAACAAATGGACTTAACAGATATATATAGAACATTTCATCCAACAACCACAGAATACACATTCTATTCAACAGCACATGGAATTTTCTCCAAGATAGACCATATGATAGGCCATAAAATGAGTCTCAATAAATTTAAGAAAATTGAAATTGTATCACGCACTCTCTCACATCACAATGGAATAAAACTGAAAATCAACTCCAAAAGGAATCTTCGAAACCATGCAAATACATGGAAATTAAATAACCTGCTCCTGAATGAGCATTGGGTGAAAAACGAAATCAAGATGGAAATGTAAAAAATTTCTTCGAACTGGATGACACAACCTATCAAGACCTCTGGGATACAGCAAAGGCAGTGCTAAGAGGAAAGTTTATAGCACTAAACACCTACGTCGAAAAGTCTGAAAGAGCACAGACAATCTAAGTTCACATCTCAGGGAACTAGAGAAGGAGGAACAAGCCAAACCCAATCCCAGCAAACAAAGGAAATAACCAAGATCAGAGCAGAACTAAATGAAATTGACACAACAACAACAACAACAAAAATACAAAACATAAATAAAACAAAAATTTGGTTATTTGAAAAGATA"; //int a = findAllGenes(dna); String dna ="ATGTGAATGATAAATGTAGTAA"; System.out.println("nombre de genes"+findAllGenes(dna)); } public static int findStopCodon(String stopCodon,String dna, int startIndex) { int stopIndex = dna.indexOf(stopCodon, startIndex+3); while (stopIndex != -1) { if((stopIndex-startIndex)%3 == 0) { return stopIndex; } else { stopIndex = dna.indexOf(stopCodon, stopIndex+1); } } return -1; } public static String writeGene(String dna,int where) { int startIndex = dna.indexOf("ATG",where); if(startIndex == -1) {return "";} int taaCodon = findStopCodon("TAA",dna,startIndex); int tgaCodon = findStopCodon("TGA",dna,startIndex); int tagCodon = findStopCodon("TAG",dna,startIndex); int minIndex = 0; if(taaCodon == -1 || (tgaCodon!=-1 && tgaCodon<taaCodon)) { minIndex = tgaCodon; } else {minIndex = taaCodon;} if(minIndex==-1 || (tagCodon!=-1 && tagCodon < minIndex)) { minIndex = tagCodon; } if(minIndex== -1) {return "";} return dna.substring(startIndex,minIndex+3); } public static int findAllGenes(String dna) { String gene = ""; int startIndex = 0; int count = 0; while(true) { if(testGene(dna)==1) { gene = writeGene(dna,startIndex); count +=1; System.out.println(gene); startIndex = dna.indexOf("ATG",dna.indexOf(gene))+gene.length(); } else { System.out.println("failed"); break; } } return count; } public static int testGene(String dna) { int a=0 ; for(int i=0; i<dna.length(); i++) { if(dna.charAt(i) == 'A' || dna.charAt(i) == 'T' || dna.charAt(i) == 'G' || dna.charAt(i) == 'C' ) {a = 1;} else {a = -1; break; } } return a;
}
}
-- you can add your functions below 👍
this code is 💩..
Q.1. ans=1
Q.2 ans=1
Q.3 ans=1
Thanks man!
TOTAL GENES = 69
Total number of strings with length greater than 60 : 23
Total number of strings with CG Ratio greater than 0.35 : 40
Longest gene length is : 489
Total number of occurances of CTG is : 224
Cheers!Wrong answer
it is the correct answer it worked with me i passed it with 90%
yes this is the correct answer , worked for me and passed with 100% can u please share your code ? @citoyenu
public class Training {
public static void main(String[] args) { //String dna="AACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTTCTAACTGGACTCTGACCCTGATTGTTGAGGGCTGCAAAGAGGAAGAATTTTATTTACCGTCGCTGTGGCCCCGAGTTGTCCCAAAGCGAGGTAATGCCCGCAAGGTCTGTGCTGATCAGGACGCAGCTCTGCCTTCGGGGTGCCCCTGGACTGCCCGCCCGCCCGGGTCTGTGCTGAGGAGAACGCTGCTCCGCCTCCGCGGTACTCCGGACATATGTGCAGAGAAGAACGCAGCTGCGCCCTCGCCATGCTCTGCGAGTCTCTGCTGATGAGAACACAGCTTCACTTTCGCAAAGGCGCAGCGCCGGCGCAGGCGCGGAGGGGCGCGCAGCGCCGGCGCAGGCGCGGAGGGGCGCGCCCGAACCCGAACCCTAATGCCGTCATAAGAGCCCTAGGGAGACCTTAGGGAACAAGCATTAAACTGACACTCGATTCTGTAGCCGGCTCTGCCAAGAGACATGGCGTTGCGGTGATATGAGGGCAGGGGTCATGGAAGAAAGCCTTCTGGTTTTAGACCCACAGGAAGATCTGTGACGCGCTCTTGGGTAGAGCACACGTTGCTGGGCGTGCGCTTGAAAAGAGCCTAAGAAGAGGGGGCGTCTGGAAGGAACCGCAACGCCAAGGGAGGGTGTCCAGCCTTCCCGCTTCAACACCTGGACACATTCTGGAAAGTTTCCTAAGAAAGCCAGAAAAATAATTTAAAAAAAAATCCAGAGGCCAGACGGGCTAATGGGGCTTTACTGCGACTATCTGGCTTAATCCTCCAAACAACCTTGCCATACCAGCCCATCAGTCCTCTGAGACAGGTGAAGAACCTGAGGTCGCAGGAGGACACCCAGAAGGTCCAGAGAGAGCCTCCTAGGCCCCCCACCTCCCCCCGTGGCAGCTCCAACCCCAGCTTTTTCACTAGTAAGGCAGTCGGGCCCCTGGGCCACGCCCACTCCCCCAAGCGGGGAAGGAGCTTCGCGCTGCCGCTTGGCTGGGGACTGGGCACCGCCCTCCCGCGGCTCCTGAGCCGGCTGCCACCAGGGGGCGCGCCAGCGGTGTCCGGGAGCCTAGCGGCGCGTGTGCAGCGGCCAGTGCACCTGCTCTGGCCCTCGCCGCGGTCTCTGCCAGGACCCCGACGCCCAGCCTGACCCTGCCATTCAGCGGGGCTGCGGCTCCACGGCCTGCGACAGCAGCCCCACCTGGCATTCAGCGCGCTCCCGGGGGCAGAGGTCGCGGTGTCCTCACGCTGTGGTGCCGGCCTACAACCCCCACGCCGGGCTCGGGCCCGGCGGAGGAGGGCGATGCTCCCCGGGTAGGACAAACCGGTCACCTGGGCTGCGACGGCGGCTTAGGGGCAGAAGCGGCGGTCCAGGGCCGCCTGGCGCAGCAGCCTGTCCCAGCCGCGGTCCCTGCAGTCCCTCCCTGGCGGCTGCGCAGCCGTCCCACGACAGGGGCCATAAACTCTCCAGAGCGGAAAGCCGCACCCTGGTGGCCCGGCCCCGCGCCCAGACCTGGCGGCCGCTGGCACCTGACCCGCTGCATGGGTCTCCAGGGAGCTCGCTGCCCACCCGGCGCTGCAGGCTCGGCTCCCTCGTACACTCTCTGGTAGGTGCTAGGGACGACCCTATGGGCCAGCTTGCCATGCCCAGTCCCCAGGCCGCACCCACCCTGGCTCCCTGGGCTAGGGGACTGGCTCCTCCTGTGAGTCGTGGGTCTGGGAGGCAGGGGCGTTAGGGGAGAGTGAGGGACCGAGGGCAGCCCCTGCTGTGTGCACAGCGAGGTCGTGCACAGGCGTCTGTTGCAGAGCGTGCAGCTTCAGATGAGACTGGATTGCAGGTGGAGATGACTGTGGGTGCGCACACCTGGAGGTGAAGGGGAGGCAGCCTGTCTACCTGACCCATGAAATACAGGAGACTGTACCCCAGAAGCAGCGGGTTCACTGCTCCATTGATTAAGCAAGTCTGGGACACACATGTAGCTAAGCTGTGAGTTCTGTACCAGCGATCCCAACACCCACGCCCTCAGAAAGACACTGGTGTGGGGCCTGGGTGCTTGTCAGGCCTGAAAGTGGAGAGCACGGGCCAGAGACACTGAGTAGGGGGAACCCACCCTAGGGCTCTGAGGGACGACGATGTGGGGAGCTGGTGACAGAGCCTGAGCTGGCCCAATGTTGCACGGTGGGGACAGATTCGAGGTACAGTGGGGACTGGTGACCTCAGTTCCCAGTGTCCCAGCCTGGCCTCCCAGTCCACCCAGCAATTAGTGGGTGCTGCCCTGCAAAGACTCTGGGGGTGCCTCAGCCCTCCTCATCACACGTGACTGGTGACTTCTGTGTCCACCCGCACAATAAGAGGGATCTTCTCTCACTTTCAGGCAAGCCCAAGAAAGTCAGGGGCCTATGTGAGCCAAAGAGGAGAGAAGGTGATGCCTCAGCCCAGTGTTTCTGCCCCACCTCGCTTGTGGCCTTCGGAACTTGATTTGCACCGCAGGAAAATGGGCAATGAAAACCCCTCCCTAACTGGCTTCTCAGTCCACTCTGACCAGCCCACTGCACAGCGCCCACCCTGCAGCTCCAGGTACAGAGGCTGGGATGGCTCTGGGCTGACCTAAGGGCCTTCTGATGGCTCCAACCCTCGGGATGCCTCATGCTCACCCTTTGGCACCCACCTGACAGCTCAGCATCTCTGCTCTCTGCCATCCTCAATGCCTGCTCTAGACAAGCCCAAGTCCCCCAGGAGTGGCAGAGGGAACTGAGCCGAAAACTAAGTCTCGGCTCACTGAACCCCAAGTGGGCTGTCCAGCCTCGCCCTTCAGTTCACAACCCCAGGCAGGTTCCCTCCAGGGATGTGATCCCAGGGGCCACAGCAGCACATTCTGGCCTAACCTATCCACTATTTAAACAGTTACTGAAAAGGCCAGGATGGCCGTGGGCCCTGACATTAATCCCCTTTCTCTGTGAGGGGGCTGGGTTGGGTTTGCCATCCTGATGTCTTTGTGGAAAGAGCTGGCAGGTGAAGCAAGTCTCAGGGGCCAGCCATGGGACAAGGAACCTAGGACTGGCCTCTGCTGGAACCCTCTGAGGCCCCTGCGGACAGGAGGATCCAATGGAGGTCTAGCCACCCCTCCCAGGTTGGTGCTCACAGCCCCTCCCTGGCCCACTCCCTGCACACCTGCACCTGCTGGTCTCTGGGAGAGGAGCATCCATCCATCTTGTGCGCATAGCTTTCGGCTCCATTTTCATGAGGATGGTCTCCTTGGCAGAAATGCCCATTAGGGGATCCTGAGCCTGTGCTAGCTCTTCTCTAAGTGCCAAAGCCAGTGAGAGGGACTTGAAAACTCAAGACTTATTAACAGTATTTTCTGCATTTTGTGCTTTCAGGGTTGTTTTTTCCTTAAAATGTGTAAAAACAAACATTGAGATTTCTATCTTTTATATAATTTGGATTCTGTTATCACACGGACTTTTCCTGAAATTTATTTTTATGTATGTATATCAAACATTGAATTTCTGTTTTCTTCTTTACTGGAATTGTTAACTGTTTTATAGGCCAAATCTTTTAAAAAAAACACATCTCTCTAATTTCTCTAAACATTTCTAATTACATATATATTTACTATACCTAATACACTACTTTGGAATTCCTTGAGGCCTAAATGCATCGGGGTGCTCTGGTTTTGTTGTTGTTATTTCTGAATGACATTTACTTTGGTGCTCTTTATTTTGCGTATTTAAAACTATTAGATCGTGTGATTATATTTGACAGGTCTTAATTGACGCGCTGTTCAGCCCTTTGAGTTCGGTTGAGTTTTGGGTTGGAGAATTTTCTTCCACAAGGGATTGTCTTGGATTTTTCTGTTTCTCCCTCAATATCCACCTGGAAAACATTTCAATTAATTTATATTTACTTAAATATTTCTGTGCAAAAACTGTGTACAAAAGCCCCAAAGCATAATTTGTGCAGTTGAGCGCATGTTCTGTTGTTCAGCATTTATGGTGGTTGGTAGTGGAAAAGATTTTTAGAATATGTGGATTTTCGGGATATTCCCAGAAGCCCAGATAGCGACACTTTACCTTTGGAGGAATTACTTCTCAGAATATTGCACACAATCAATCGCCTTTGGAAGGAGCATATATCCCCAGCAAAAGCTCTGGTTTTTTGAAGTCTGTATTGTGTGTTACTTCCAGGAGAATATGCAATGATGACAATGTTATTAGATGATTCAAATATGAAGTGCTGTTATGCCAAACAATGAATCTTTGTGTTATACATTATGCCTAACTATAAATCTTTGTGTTATACATTTTAATGTCATTGGAGAGTACTCCTGTCTTCTTGGCATTATTGATAATTAGATTCTAATTGCTAATAAGTCAGAAAAATTAGGAACACCAAATTTCAGTTGTCTCAAAAGCACTCCTCTTATTAAATTTGGATGTTTACCTTTATCACATCAAAAGAAATATTGTTAGAAAGGTGTTTAATGTTTTGCAGATGGATAGATTACTGTTATTAGTTCTCATTTCATTGTTAATTTTTAAAACCATAAGGTTGGAAGTATCAATATGCCTTTCAATATACCTTAGTGGAATTTATTAAATTTTCATGGATGTCCTTTAGGGGGTTCAGGAAGTTATTTCTATTGCTAGATTTCTGGAAGATTTATCAGGAATGAGTGTCAGACATTGTCAGACGTCCATTGAAATCATCATGGTCTTTTCCTTTATTCTATTAATATGATGTATTACACTGATTGATTTTTAAATTTGTATTGGTAGGATAATTCCACTTGGTTATATTGTCTAACTTTTTTCTAATTTTCTTTCATTTTTATTACAGATGAGGCCTCACTCTGTCACCCAGGTTGGGGTGGAGTGGCACAGTCACAGCTCACTATAACCTCAAGCTCCTGGGCTCAAGTGATCCTGCCACCTCAGCCTCCTAAGTAGCTGGAACTACAGATGTGCACTGCCATGCCAGGCTTGTCTAACATTTTTATGTGTTGCTTCATCCAGTTTGCTAGAGTTTTTGGAGATTTCTGTCTTCATTCATGAGGGATAATAGTCTGCACTTTTATTTTCTTGTGATACTTTTGTCTGATTTGTTATCTGGGTAATACTGGCCTTGAAAATGAATTGATGTTTTCCTGCTTCTCTGCTTTGCAAGTGTTTGTGAAGGATTGGTTATTCATTAAGTGTTTAATAGAATTCACTAGTGAAGCTATGTGAGCCAGGGCTAGACTGATGAAGAGTTTTCATTAGTCTAATCTGTTTACTTGCTGTATAAGTACGCATATATTCTCTTTCTTCTTGATTTAATTTTACACTTTGTGTATAGCAGGGAATCTGTGTCTAATTTGTAGTATTTCATGCTTCTAGGTTTTCATGGCAGTTGAGATGTAAGAATAACAATAATGTTGGGAGAAGGAAGTTGTGGACAATCCATGAATATCCCAACATCTGTTGTAGGAAGGTTAAGATTACTTTTTTTTTTTTTGCTGTACTGAACTGAATACTCTTATTTATAATGTCAGACAAATGTAATGTTGTATATAAATAGAACTAGGAAAATGTGCCATTTGTCTTAGTATTTAATCAAGATGGAAGTCTGGGCCTACCTCCTCTCTTTTATTAATATGTAGACAGGACACCAACACAAATTAGAATGAAGACAAACAAAATGTTAGCAAATGAAGAATGGTATCAATTGGTTAAAATGTGATGAAATAGAGTGGTGAATATTTACATAGAATCCATGATGTGTTAGGTGCTATTTCAAGCTATTTGCACATATAGTTTTAATACCAATGACGTTAAAATGTATAACACAAAGATTCATATAAATAAAAATTACAACATTGTAAATAATATTAGGTGACACTAAAACTGTCATAGAAATACACATTTATATAAAACATAAAGTAACATGAAGTATTAAATTTTAGAAACTTTGATTACTAATCAGATGAACAACTGATTAGCCTTTTTATCCAGTAAAAAAGGCATACATATTATTTTCAAATTCCAGAGACAAATATTTTAAATATTGAAGTTGAAGACCTAAAAATGTGTCACTGACCTCATGGAAGTAGATATTCACTAGGTGATATTTTCTAGGCTCTCTGAAATTATATCAGAAAAATGTGAATTAGAATATAACCCATAAATAATATCTGGCCACATACAAAGTAATTGAAGATCAATTTAAATGGCTATTGGATTAAGAAATAGGGACTGAGGTAAATTTGCAGTGTCAGGGAGGATCTAAGGAGGAAGCATTGACACTGGAGCCCAAGGACCTGGGATCACAGAACAGATTCTACCAGTGCTAACTTACTGCTCCACAGAAAACATCAATTCTGCTCATGCGCAGGTACAATTCATCAAGAAAGGAATTACAACTTCAGAAATGTGTTCAAAATATATCCATACTTTGACATATTAATGAAGTAATCACATTCTACACATAACTACTCCATATGGAATACTGGGGAGGAGGTGTTCCAAATAAAGAGACTGAGGATTTCTCATGAGAACTCAGTGTCTGCTAGAAAATATCTAAGTAAAATATTTTACTTATGTGGAAAGTGTGGATGTTTGTGCATCAAAAGTTTCAAGAATCCCTAAAATTTACAATGGAGATGAGGAGAAAATATCAGAATTTCCCAGCACCAGAAATAAGGCAAGAAAAAATTCAGAGGGGTTGTAAATGTGAAAAGCCAATGGCTGGTCACACAGCAACATTGATAACCTTGTGCCTGGACAACTAGAATAAATACATAAACATACACATTGAAAATATTTCCAATATTAGATCTCCCTCATGTGAGAACTAAATTATAAAGATTGAAGCATAGAAGAAAATAAGCTACCAGAATAAATTTGATTACACATAAATTTCTGATATTGAAACTGTCACAAATGTTTAAGTTGGTAGTGGAAGACAAAGGACATATAATCTTGGGAGTCCTAAGGCCCTGCCCACTGCCAGTCCCTCCACACTACTACAGCTGATGCTTTCTGGAAATCACCACCTCCTGGCAGGAGCCCAACCAGCACAAATATAGAGCATTAAACCACCAAAGCTAAGGAGGCTCACAGAGTCTATTGCACCCTTCACCACCTCCACTGGAACAGGCGCTGGTATCCATGGCTCAGAGACCCAAAGATGGTTCACATCACAGGGCTCTATGCAGACAACCCCCAGTACCAGCCCAAAGCCACGTAGACCTGCTGGGTGGCTAGACCCAGAAGAGAGACAACAATCAATGCACTTTGGCTTACAGGAAGCCATGCCCATAGGAAAAAGGGGAGAGTACTACGTCAAGGGAACACCCCGTGGGATGAAAGAGTCTGAACAACAGTCTTCAGCCCTAGACCTTTCCTCTGACAGAGTCTACCAAAATGAGAAGGAACCAGAAAACCAACCCTGGTAATCTGACAAAACAAGAATCTTCAACACCCCCCAAAAAATCACACCAGTTCATCACCAATGGATCCAAACAAAGAAGAAATCACTGATTCATCTAAAAAAAAATTCAGGTTAGTTATTAAGCTAATCAGGGAGGGGCCAGAGAAAGATGAAGCCCAATGCAAGAAAATCCAAAAAATGATACAATACGTGAAGGGAGAATTATTCAAGGAAATAGATAGCTTAAATAAAAAAATAAAAAATCAGGAAACTTTGGACGTACTTTTAGAAATGTGAAATGCTCTGGAAAGTCTCAGCAATAGAATTGAACAAGTAGAAGAAAGAAATTCAGAATTCGAAGACAAGGTCTTTGATTTAACCCAATCCAATAAAGACAAAGAAAAAAGAATAAGAAAATATGAGCAAAGTCTCCAAGGAGTCTGGCATTCTGTTAAATGATGAAACCTAACACTAATTGGTGTACCTGAGGAAGAAGTGAATTCTAAAAGCCAGGAAAACATATTTGGGAGAATAATCTAGGAAAACTTCCATGGCCTTGTGAGAGACCTAGACATCCAAATACAAGAACCACAAATAACACCTGGGAAATTCATCACAAAAAGATCTTAGCCTAGGCACATTGTCATTAGGTTATCCAAAGTTAAGACAAAGGAAAGAATCTTAAGAGCTGTGAGACAGAAGCACTAGGTAACCTATAAAGGAAAACCTGTCAAATTAACAGCAGATTTCACAGCAGGAACCTTACAAGCTAGATGGGATTGGGGCCCTTTCTTCAGCCTCCTCAAACAAAACAATTATCAGCCAAGAATTTTGTATCCAGCAAAACTAAACATCATATATGAAGGAAAGATACAGTCATTTTCAGACAAACAAATGCTGACAGAATTTGCCATTACCAAGCCAGGACTCTAAGAACTGCTAAAAGGAGCTCTAAATCATGAAACAAATCCTGGAAACACATCAAAACAGAACTTCATTAACGCATAAATCACACAGGACCTATAAAACAAAAATACAAGTTAAAAAACAAAAACAAAGTACAGAGGCAACAAAGAGCATGATGAAAGCAATGGTACCTCACTTTTTAATACTAATGTTGGTTGTAAATGGCTTAAATGCTCCACTTACAAGATACAGAACCACAGAATGGATAACAACTCACCAACTAACTATCTGCTGCCTTCAGGAGACTCACCTAACACATAACGACTTACATAAACTTAAGGAAAGTGGTAGAAAAAGGCATTTCATGCAAATGGACACCAAAAGCAAGCAGCAGTAACTATTCTCATATGAGACAAAACAAACTTTAAAGCAACAGTAGCTAAAAGAGACAAAGAGAGACAGTATATCATCTGTCACCTGACAGTCTCATCCAACAGAAAAATATGACAATCCTAAACATATGTGAACCTAACACTGGAGCTCCCAAATTTATAAAACAATTACTAGTAGACATAAGAAATAAGATAGACAGCAACACAATAATAGTGGGGGACTTCAATACTCCACTGACAGCACTAGACAGGTCATCAAGACAGAAAGTCAACAAAGAAACAATGGATTTAAACTATACTTTGGAACAAATGGACTTAACAGATATATATAGAACATTTCATCCAACAACCACAGAATACACATTCTATTCAACAGCACATGGAATTTTCTCCAAGATAGACCATATGATAGGCCATAAAATGAGTCTCAATAAATTTAAGAAAATTGAAATTGTATCACGCACTCTCTCACATCACAATGGAATAAAACTGAAAATCAACTCCAAAAGGAATCTTCGAAACCATGCAAATACATGGAAATTAAATAACCTGCTCCTGAATGAGCATTGGGTGAAAAACGAAATCAAGATGGAAATGTAAAAAATTTCTTCGAACTGGATGACACAACCTATCAAGACCTCTGGGATACAGCAAAGGCAGTGCTAAGAGGAAAGTTTATAGCACTAAACACCTACGTCGAAAAGTCTGAAAGAGCACAGACAATCTAAGTTCACATCTCAGGGAACTAGAGAAGGAGGAACAAGCCAAACCCAATCCCAGCAAACAAAGGAAATAACCAAGATCAGAGCAGAACTAAATGAAATTGACACAACAACAACAACAACAAAAATACAAAACATAAATAAAACAAAAATTTGGTTATTTGAAAAGATA"; //int a = findAllGenes(dna); String dna ="ATGTGAATGATAAATGTAGTAA"; System.out.println("nombre de genes"+findAllGenes(dna)); } public static int findStopCodon(String stopCodon,String dna, int startIndex) { int stopIndex = dna.indexOf(stopCodon, startIndex+3); while (stopIndex != -1) { if((stopIndex-startIndex)%3 == 0) { return stopIndex; } else { stopIndex = dna.indexOf(stopCodon, stopIndex+1); } } return -1; } public static String writeGene(String dna,int where) { int startIndex = dna.indexOf("ATG",where); if(startIndex == -1) {return "";} int taaCodon = findStopCodon("TAA",dna,startIndex); int tgaCodon = findStopCodon("TGA",dna,startIndex); int tagCodon = findStopCodon("TAG",dna,startIndex); int minIndex = 0; if(taaCodon == -1 || (tgaCodon!=-1 && tgaCodon<taaCodon)) { minIndex = tgaCodon; } else {minIndex = taaCodon;} if(minIndex==-1 || (tagCodon!=-1 && tagCodon < minIndex)) { minIndex = tagCodon; } if(minIndex== -1) {return "";} return dna.substring(startIndex,minIndex+3); } public static int findAllGenes(String dna) { String gene = ""; int startIndex = 0; int count = 0; while(true) { if(testGene(dna)==1) { gene = writeGene(dna,startIndex); count +=1; System.out.println(gene); startIndex = dna.indexOf("ATG",dna.indexOf(gene))+gene.length(); } else { System.out.println("failed"); break; } } return count; } public static int testGene(String dna) { int a=0 ; for(int i=0; i<dna.length(); i++) { if(dna.charAt(i) == 'A' || dna.charAt(i) == 'T' || dna.charAt(i) == 'G' || dna.charAt(i) == 'C' ) {a = 1;} else {a = -1; break; } } return a;
}
}
-- you can add your functions below +1this code is ..
sorry dude your IDE is poop
Q.1. ans=1
Q.2 ans=1
Q.3 ans=1
Correct Answer
Quize Using Storage Resource week 2
Q1. -->ans 1
Q2 --> ans 1
Q3 --> ans 1
Q4-->return ((double) countcg)/dna.length();
Q5-->The code start=pos+1;should go immediately after the line containing countcg+=1
100% successful!
Q.1. ans=1
Q.2 ans=1
Q.3 ans=1Correct Answer
Aapne bachaliya bhai
/**
import edu.duke.*;
public class part1 {
public int findStopCodon(String dna,int startIndex,String stopcodon ){
int currIndex = dna.indexOf(stopcodon,startIndex+3);
while(currIndex!=-1){
if((currIndex-startIndex)%3==0){
return currIndex;
}
else{
currIndex = dna.indexOf(stopcodon,currIndex+1);
}
}
return dna.length();
}
public String findGene(String dna ){
int startIndex = dna.indexOf("ATG");
if(startIndex==-1){
return "" ;
}
int indexTAA = findStopCodon(dna,startIndex,"TAA");
int indexTAG = findStopCodon(dna,startIndex,"TAG");
int indexTGA = findStopCodon(dna,startIndex,"TGA");
int temp= Math.min(indexTAA,indexTAG);
int firstStopCodon = Math.min(temp,indexTGA);
if(firstStopCodon==dna.length()){
return "";
}
String resultString = dna.substring(startIndex,firstStopCodon+3);//line 40
return resultString;
}
public StorageResource getAllGene(String dna){
StorageResource geneList = new StorageResource();
int startIndex = 0;
while(true){
String currentGene = findGene(dna);//line 50
if(currentGene.length()==0){
break;
}else{
geneList.add(currentGene);
startIndex = dna.indexOf(currentGene,startIndex)+currentGene.length();
dna = dna.substring(startIndex,dna.length());
}
}
return geneList;
}
public double cgRatio(String dna){
StorageResource gene = getAllGene(dna);
double cgratio = 0;
for(String g: gene.data()){
int cOcc=0,oOcc=0,startIndexC=0,startIndexO=0;
double count=0;
while(cOcc!=-1||oOcc!=-1){
cOcc=dna.indexOf("C",startIndexC);
if(cOcc!=-1){
count++;
startIndexC=cOcc+1;
}
oOcc=dna.indexOf("G",startIndexO);
if(oOcc!=-1){
count++;
startIndexO=oOcc+1;
}
}
double dnaLength = dna.length();
cgratio = count/dnaLength;
return cgratio;
}
return cgratio;
}
public int countCTG(String dna){
int count =0, ctgOcc =0,startIndexCTG=0;
while (ctgOcc!=-1){
ctgOcc=dna.indexOf("CTG",startIndexCTG);
if(ctgOcc!=-1){
count++;
startIndexCTG=ctgOcc+3;
}
}
return count;
}
public void processGenes(StorageResource sr){
int count = 0,countCg = 0,countgene=1;
int temp=0;
for( String g: sr.data()){
StorageResource geneList=getAllGene(g); //line 116
for(String gList:geneList.data()){
System.out.println("gene "+countgene +" cointained is "+gList);
if(gList.length()>60){
System.out.println("The gene with a length longer then 60 is "+gList);
count++;
}
if(temp<gList.length()){
temp=gList.length();
}
else{
temp=temp;
}
countgene++;
double cgRatio=cgRatio(gList);
if( cgRatio>0.35)
{
countCg++;
System.out.println("the "+countCg+" cg ratio is "+cgRatio);
}
}
int numberOfCTG=countCTG(g);
System.out.println("the number of time CTG appears is "+numberOfCTG);
}
System.out.println("the number of string with length longer then 60 is "+count);
System.out.println("the no of string with cgratio greater then 0.35 "+countCg);
System.out.println("the longest length of gene in the dna is "+temp);
}
public void testProcessGene(){
FileResource fr=new FileResource("reviewTest.fa");
String dna1 = fr.asString();
String dna = dna1.toUpperCase();
System.out.println(dna);
StorageResource sr= new StorageResource();
sr.add(dna);
processGenes(sr);//line 152
}
}
// reviewTest.fa=https://users.cs.duke.edu/~rodger/GRch38dnapart.fa
//please help me why my answere is not correct where is the bug in my code
// I am getting total no of gene 34 and the answere is 69 help me
//Total number of strings with length greater than 60 : 23(I am getting 11)
//Total number of strings with CG Ratio greater than 0.35 : 40(i am getting 25)
//Longest gene length is : 489 (i got this right)
//Total number of occurances of CTG is : 224 (i got this right)
please help me
TOTAL GENES = 69
Total number of strings with length greater than 60 : 23
Total number of strings with CG Ratio greater than 0.35 : 40
Longest gene length is : 489
Total number of occurances of CTG is : 224Cheers!
Thanks! All correct. Actually I was stuck at the longest gene length.
can i get week 3 practice quiz and final quiz answer ?
TOTAL GENES = 69
Total number of strings with length greater than 60 : 23
Total number of strings with CG Ratio greater than 0.35 : 40
Longest gene length is : 489
Total number of occurances of CTG is : 224Cheers!
Can I get your code bro?
Week 3 assignment answers please
How many genes are there in the file brca1line.fa?
Ans 1
How many genes are there in the file brca1line.fa that are longer than 60?
Ans 1
How many genes are there in the file brca1line.fa that have a C-G-ratio greater than 0.35?
Ans 1
How many genes are there in the file brca1line.fa?
Ans 1
How many genes are there in the file brca1line.fa that are longer than 60?
Ans 1
How many genes are there in the file brca1line.fa that have a C-G-ratio greater than 0.35?
Ans 1
Right one
TOTAL GENES = 69
Total number of strings with length greater than 60 : 23
Total number of strings with CG Ratio greater than 0.35 : 40
Longest gene length is : 489
Total number of occurances of CTG is : 224Cheers!
Hey, can you please send the code...
TOTAL GENES = 69
Total number of strings with length greater than 60 : 23
Total number of strings with CG Ratio greater than 0.35 : 40
Longest gene length is : 489
Total number of occurances of CTG is : 224Cheers!
Wrong answers
I don't understand why the answers are all ones, I'm finding some valid genes with my code and having them verified with my bare eyes.
it is the correct answer it worked with me i passed it with 90%