Wayne's Bioinformatics Code Portal fomightez
fomightez
/ gist_test.py
Last active
October 16, 2024 18:27
Test `uv run` with gist Python script with
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| # Demonstrating "you can now uv run scripts (with inline deps!) from stdin and URL" https://x.com/trevmanz/status/1846301009053970542 and trying | |
| # with the gist use suggestion in https://x.com/trevmanz/status/1846301011809558877 | |
| # How to: go https://github.com/fomightez/3Dscatter_plot_mod_playground-binder and launch a session. Install `uv` via `pip install uv`, then run `uv run https://gist.githubusercontent.com/fomightez/3d90c4e5594ddcdf6dd023a80959c107/raw/8b940f9fe9b5a2c0ccc20635cbbd0cce7ef01b53/gist_test.py` | |
| # /// script | |
| # requires-python = ">=3.12" | |
| # dependencies = [ | |
| # "rich>=13.9.2", | |
| # ] | |
| # /// |
fomightez
/ SO_PyVista_Oct_15.ipynb
Created
October 15, 2024 19:10
PyVista screenshot stuff for SO 79089061
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fomightez
/ Jupyter_Discourse_forum_29243_test.ipynb
Last active
October 15, 2024 15:31
Pandas example for Jupyter Discourse exchange
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fomightez
/ SINGLE_PAGEsosept19_2024.ipynb
Last active
September 19, 2024 18:14
SO to save Plotly Express plots using a for loop and composite a PDF - two choices: single page or multi-page are covered
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fomightez
/ Automatically_generating_unit_tests_in_Snakemake_Example_Run.ipynb
Last active
September 17, 2024 20:35
Testing Snakemake making unit tests automatically
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fomightez
/ Tables_and_Styling_and_HTML_and_Pandas.ipynb
Last active
September 17, 2024 17:17
Tables and Styling and HTML & Pandas
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fomightez
/ Data-dependent_conditional_execution_in_Snakemake_from_documentation.ipynb
Last active
September 14, 2024 04:53
Data-dependent conditional execution in Snakemake
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fomightez
/ snakemake snakefile set up for August SO question directory as input.ipynb
Created
August 20, 2024 17:47
August SO question & answer https://stackoverflow.com/a/78893777/8508004 : Snakemake - adapt the checkpoints example pipeline to the new version 8.18.1
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fomightez
/ README.md
Last active
September 6, 2024 15:40
— forked from jtpio/README.md
JupyterLab 4.3 on Binder
fomightez
/ mplcursors show annotation in other subplot when hover.ipynb
Last active
October 11, 2024 14:49
starting draft for https://stackoverflow.com/q/78827396/8508004
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