I hereby claim:
- I am gaurav on github.
- I am mrvaidya (https://keybase.io/mrvaidya) on keybase.
- I have a public key ASAvem26jsIZR6NjpVs9WeJv0Pz7wwYK1cOBUVhqIVSwtAo
To claim this, I am signing this object:
" Activate pathogen. | |
call pathogen#infect() | |
call pathogen#helptags() | |
" These are a few of my favourite settings. | |
syntax on | |
set background=dark | |
set hlsearch | |
set incsearch | |
set smartindent |
1. Find your texbin directory. This is usually /usr/texbin, which is symlinked to wherever the actual directory is. | |
2. Add it to your PATH (i.e. `# export PATH=/usr/texbin:$PATH`) | |
3. Run the 'htlatex' command. This will convert your LaTeX file into an HTML document. Note that this really just a script around normal LaTeX, so you'll have to do the usual things (htlatex -> bibtex -> htlatex for citations, htlatex -> htlatex for references). I think: I had my LaTeX all PDF-LaTeXed and ready to go, so all the .bib/.toc/etc. files had already been created. | |
3.1. You might want to run 'htlatex file.tex "xhtml,fn-in"' if you have footnotes. Without that option, footnotes will be put into their own HTML file. | |
4. At this point, you have an HTML file. Check it and make sure it's good enough. | |
5. Open the HTML file in TextEdit. Oddly enough, Pages can't open HTML files, but TextEdit can. Go figure. | |
6. TextEdit can now save your file as an RTF or Doc file. | |
7. Success! |
Jon Jon Wendt gives Gene Valgene his hooded cloak. | |
Gene Valgene: ... | |
Gene Valgene: [Batman voice] I'm the Batman now. | |
Jon Jon Wendt: Batman! | |
Gene Valgene: Batman. | |
Jon Jon Wendt: Batman! Batman! Batman! | |
Gene Valgene: BAAAAAAAAAT | |
Gene Valgene: MAAAAAAAAAAN | |
Jon Jon Wendt: That's the spirit! | |
Gene Valgene: [Batman voice] Hmm. |
# '.' indicates XML nodes | |
# '/' indicates XML attributes | |
# '#' are XML values, but only for some fields | |
(PubmedArticleSet.PubmedArticle.MedlineCitation.Article.Abstract.AbstractText,34722040) | |
(PubmedArticleSet.PubmedArticle.MedlineCitation.Article.Abstract.AbstractText.DispFormula.math.mfrac.mn,2) | |
(PubmedArticleSet.PubmedArticle.MedlineCitation.Article.Abstract.AbstractText.DispFormula.math.mfrac.mrow.mi,7) | |
(PubmedArticleSet.PubmedArticle.MedlineCitation.Article.Abstract.AbstractText.DispFormula.math.mfrac.mrow.mo,6) | |
(PubmedArticleSet.PubmedArticle.MedlineCitation.Article.Abstract.AbstractText.DispFormula.math.mfrac.mrow.msub.mi,4) | |
(PubmedArticleSet.PubmedArticle.MedlineCitation.Article.Abstract.AbstractText.DispFormula.math.mfrac.msup.mi,1) | |
(PubmedArticleSet.PubmedArticle.MedlineCitation.Article.Abstract.AbstractText.DispFormula.math.mfrac.msup.mrow.mi,1) |
{ | |
"type": "Failure", | |
"node": "http://dataexchange.clinicalgenome.org/CGEX_CtxAll010", | |
"shape": "http://dataexchange.clinicalgenome.org/interpretation/shacl/shapes/ContextualAllele", | |
"errors": [ | |
{ | |
"type": "TypeMismatch", | |
"triple": { | |
"type": "TestedTriple", | |
"subject": "http://dataexchange.clinicalgenome.org/CGEX_CtxAll010", |
{ | |
"nodes": [ | |
{ | |
"name": "root", | |
"ontology_reference": "", | |
"values": {}, | |
"links": [], | |
"properties": [] | |
}, | |
{ |
$ pipenv install linkml==0.0.7 | |
Creating a Pipfile for this project... | |
Installing linkml==0.0.7... | |
Adding linkml to Pipfile's [packages]... | |
✔ Installation Succeeded | |
Pipfile.lock not found, creating... | |
Locking [dev-packages] dependencies... | |
Locking [packages] dependencies... | |
Building requirements... | |
Resolving dependencies... |
--- ccdhmodel.yaml 2021-09-16 14:57:11.000000000 -0400 | |
+++ crdch_model.yaml 2021-09-16 14:56:48.000000000 -0400 | |
@@ -1,84 +1,84 @@ | |
name: CRDC-H | |
notes: | |
- Derived from [CDM_Dictionary_v1 (Active)](https://docs.google.com/spreadsheets/d/1oWS7cao-fgz2MKWtyr8h2dEL9unX__0bJrWKv6mQmM4) | |
-id: https://example.org/ccdh | |
-version: v1.0-3-g99ffd30c-dirty | |
+id: https://example.org/crdch | |
+version: v0.2-346-g2a758251 |
I hereby claim:
To claim this, I am signing this object:
# Commands used to generate the other two files | |
head -n 70 medmentions.json | tail -n 1 > medmentions-line-70.json | |
head -n 2 pubmed_ds/split_0.txt | tail -n 1 > pubmed-line-2.json |