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@hcanaj
hcanaj / gist:3a5bb9e8357016181a6a19a840428679
Last active November 13, 2019 06:17
Running SMRTlink on AWS

Instance Details

Need to spin up a m5.24xlarge 16.04 Ubuntu instance: Number of vCPUs 96: Attach a 15 T Volume (used this as the location to import raw data and output saved results): Modify the volume so that it automounts each time you start and stop instance as follows:

Automounting Data Volume

/etc/fstab

with changes:

[508/508]ubuntu@ip-172-31-15-182:~$
ubuntu@ip-172-31-15-182:~$
ubuntu@ip-172-31-15-182:~$ ls
anaconda crispr_primer.py example_output.csv example_output.csv.dropout isPcr primer3_settings.cnf volume
blat example_input.bed.csv example_output.csv.bed genome plate8primers.csv primer3_settings_dir