[CELLORGANIZER] demo2D11 for Sergiu Sanielevici at PSC

script.sh

#!/bin/bash

# @icaoberg 20/02/2020
# This script will
# * Download and extract a pre-release version of CellOrganizer v2.9.0
# * Run demo2D11. A training demo created for Sergiu Sanielevici
#
# For more information about CellOrganizer, visit the last release documentation
# http://www.cellorganizer.org/docs/2.8.1/
#
# demo2D11 uses a collection of 2D HeLa images to train a generative model

if [ -x $(which matlab) ]; then
	wget -nc http://linus.cbd.cs.cmu.edu/cellorganizer-v2.9.0-pre-alpha.tgz
	tar -xf cellorganizer-v2.9.0-pre-alpha.tgz
	rm -fv cellorganizer-v2.9.0-pre-alpha.tgz

	cd cellorganizer-v2.9.0-pre-alpha

	matlab -nodesktop -nosplash -r "setup; demo2D11; exit;"
else
	echo "WARNING: This script assumes the Matlab binary in on PATH."
	echo "Cannot find it. Please install or add to PATH."
fi