Download files that follow a pattern in their filename #slurm

script.sh

#!/bin/bash

## the next line selects the partition/queue
#SBATCH -p pool1

## the next line selects the number of nodes
#SBATCH -N 1

## the next line selects the number of CPUs
#SBATCH -n 1

## the next line selects the memory size
#SBATCH --mem=2G

## the next line selects the walltime
#SBATCH -t 12:00

## the next lines are used to mail the user
## valid type values are BEGIN, END, FAIL, REQUEUE, and ALL (any state change).
#SBATCH --mail-type=END
#SBATCH --mail-user=icaoberg@andrew.cmu.edu

ADDRESS='http://murphylab.web.cmu.edu/software/2012_PLoS_ONE_Reannotation/'

for INDEX in {1..36}
do
  FILENAME='HPA_reannotation_rawdataHPA_A431-'$INDEX'.tgz'
  URL=$ADDRESS$FILENAME
  wget -nc $URL
done