bradmontgomery

#!/usr/bin/env python
"""
Very simple HTTP server in python (Updated for Python 3.7)

Usage:

    ./dummy-web-server.py -h
    ./dummy-web-server.py -l localhost -p 8000

Send a GET request:

bradmontgomery

Setting up a SSL Cert from Comodo

I use Namecheap.com as a registrar, and they resale SSL Certs from a number of other companies, including Comodo.

These are the steps I went through to set up an SSL cert.

Purchase the cert

soheilhy

Virtual Hosts on nginx (CSC309)

When hosting our web applications, we often have one public IP address (i.e., an IP address visible to the outside world) using which we want to host multiple web apps. For example, one may wants to host three different web apps respectively for example1.com, example2.com, and example1.com/images on the same machine using a single IP address.

How can we do that? Well, the good news is Internet browsers

nitaku

A minimal HTTP server in python. It sends a JSON Hello World for GET requests, and echoes back JSON for POST requests.

python server.py 8009
Starting httpd on port 8009...

curl http://localhost:8009
{"received": "ok", "hello": "world"}

thaJeztah

Commit, clone a container

To 'clone' a container, you'll have to make an image of that container first, you can do so by "committing" the container. Docker will (by default) pause all processes running in the container during commit to preserve data-consistency.

For example;

docker commit --message="Snapshot of my container" my_container my_container_snapshot:yymmdd

olgabot

This readme should help you get started with "pfam_scan.pl", which is for use
with the HMMER3 version of HMMER.

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- Setting up -------------------------------------------------------------------
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Unpack the script
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Su-Shee

Falsehoods Programmers Believe About "Women In Tech"

• We have absolutely no idea what we're doing in tech. Please explain the utmost basic things to us.

• We only do web design. Our whole reason of being in tech is to make things pretty. Consider us the doilies of the industry.

• We're not laughing about your joke, so we clearly need you explain it to us. In great detail.

• We're only in tech to find a husband, boyfriend or generally to get laid.

iamtekeste

Download Google Drive files with WGET

Example Google Drive download link:

https://docs.google.com/open?id=[ID]
To download the file with WGET you need to use this link:

https://googledrive.com/host/[ID]

Example WGET command:

aallan

000000	Officially Xerox
000001	SuperLAN-2U
000002	BBN (was internal usage only, no longer used)
000003	XEROX CORPORATION
000004	XEROX CORPORATION
000005	XEROX CORPORATION
000006	XEROX CORPORATION
000007	XEROX CORPORATION
000008	XEROX CORPORATION
000009	powerpipes?

darencard

Please see the most up-to-date version of this protocol on my blog at https://darencard.net/blog/.

Genome Annotation using MAKER

MAKER is a great tool for annotating a reference genome using empirical and ab initio gene predictions. GMOD, the umbrella organization that includes MAKER, has some nice tutorials online for running MAKER. However, these were quite simplified examples and it took a bit of effort to wrap my head completely around everything. Here I will describe a de novo genome annotation for Boa constrictor in detail, so that there is a record and that it is easy to use this as a guide to annotate any genome.

Software & Data

Software prerequisites:

1. RepeatModeler and RepeatMasker with all dependencies (I used NCBI BLAST) and RepBase (ver