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September 27, 2016 20:37
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# This list was boostrapped from the FastQC contaminants.txt. | |
# TODO: add missing Illumina adapters from official list at: | |
# http://support.illumina.com/downloads/illumina-customer-sequence-letter.html | |
>IlluminaSingleEndAdapter1 | |
GATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG | |
>IlluminaSingleEndAdapter2 | |
CAAGCAGAAGACGGCATACGAGCTCTTCCGATCT | |
>IlluminaSingleEndPCRPrimer1 | |
AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>IlluminaSingleEndPCRPrimer2 | |
CAAGCAGAAGACGGCATACGAGCTCTTCCGATCT | |
>IlluminaSingleEndSequencingPrimer | |
ACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>IlluminaPairedEndAdapter1 | |
ACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>IlluminaPairedEndAdapter2 | |
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAG | |
>IlluminaPariedEndPCRPrimer1 | |
AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>IlluminaPairedEndPCRPrimer2 | |
CAAGCAGAAGACGGCATACGAGATCGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT | |
>IlluminaPariedEndSequencingPrimer1 | |
ACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>IlluminaPairedEndSequencingPrimer2 | |
CGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT | |
>IlluminaDpnIIexpressionAdapter1 | |
ACAGGTTCAGAGTTCTACAGTCCGAC | |
>IlluminaDpnIIexpressionAdapter2 | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaDpnIIexpressionPCRPrimer1 | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaDpnIIexpressionPCRPrimer2 | |
AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA | |
>IlluminaDpnIIexpressionSequencingPrimer | |
CGACAGGTTCAGAGTTCTACAGTCCGACGATC | |
>IlluminaNlaIIIexpressionAdapter1 | |
ACAGGTTCAGAGTTCTACAGTCCGACATG | |
>IlluminaNlaIIIexpressionAdapter2 | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaNlaIIIexpressionPCRPrimer1 | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaNlaIIIexpressionPCRPrimer2 | |
AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA | |
>IlluminaNlaIIIexpressionSequencingPrimer | |
CCGACAGGTTCAGAGTTCTACAGTCCGACATG | |
>IlluminaSmallRNAAdapter1 | |
GTTCAGAGTTCTACAGTCCGACGATC | |
>IlluminaSmallRNAAdapter2 | |
TGGAATTCTCGGGTGCCAAGG | |
>IlluminaSmallRNARTPrimer | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaSmallRNAPCRPrimer1 | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaSmallRNAPCRPrimer2 | |
AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA | |
>IlluminaSmallRNASequencingPrimer | |
CGACAGGTTCAGAGTTCTACAGTCCGACGATC | |
>IlluminaMultiplexingAdapter1 | |
GATCGGAAGAGCACACGTCT | |
>IlluminaMultiplexingAdapter2 | |
ACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>IlluminaMultiplexingPCRPrimer1.01 | |
AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>IlluminaMultiplexingPCRPrimer2.01 | |
GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT | |
>IlluminaMultiplexingRead1SequencingPrimer | |
ACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>IlluminaMultiplexingIndexSequencingPrimer | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCAC | |
>IlluminaMultiplexingRead2SequencingPrimer | |
GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT | |
>IlluminaPCRPrimerIndex1 | |
CAAGCAGAAGACGGCATACGAGATCGTGATGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex2 | |
CAAGCAGAAGACGGCATACGAGATACATCGGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex3 | |
CAAGCAGAAGACGGCATACGAGATGCCTAAGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex4 | |
CAAGCAGAAGACGGCATACGAGATTGGTCAGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex5 | |
CAAGCAGAAGACGGCATACGAGATCACTGTGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex6 | |
CAAGCAGAAGACGGCATACGAGATATTGGCGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex7 | |
CAAGCAGAAGACGGCATACGAGATGATCTGGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex8 | |
CAAGCAGAAGACGGCATACGAGATTCAAGTGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex9 | |
CAAGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex10 | |
CAAGCAGAAGACGGCATACGAGATAAGCTAGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex11 | |
CAAGCAGAAGACGGCATACGAGATGTAGCCGTGACTGGAGTTC | |
>IlluminaPCRPrimerIndex12 | |
CAAGCAGAAGACGGCATACGAGATTACAAGGTGACTGGAGTTC | |
>IlluminaDpnIIGexAdapter1 | |
GATCGTCGGACTGTAGAACTCTGAAC | |
>IlluminaDpnIIGexAdapter1.01 | |
ACAGGTTCAGAGTTCTACAGTCCGAC | |
>IlluminaDpnIIGexAdapter2 | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaDpnIIGexAdapter2.01 | |
TCGTATGCCGTCTTCTGCTTG | |
>IlluminaDpnIIGexPCRPrimer1 | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaDpnIIGexPCRPrimer2 | |
AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA | |
>IlluminaDpnIIGexSequencingPrimer | |
CGACAGGTTCAGAGTTCTACAGTCCGACGATC | |
>IlluminaNlaIIIGexAdapter1.01 | |
TCGGACTGTAGAACTCTGAAC | |
>IlluminaNlaIIIGexAdapter1.02 | |
ACAGGTTCAGAGTTCTACAGTCCGACATG | |
>IlluminaNlaIIIGexAdapter2.01 | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaNlaIIIGexAdapter2.02 | |
TCGTATGCCGTCTTCTGCTTG | |
>IlluminaNlaIIIGexPCRPrimer1 | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaNlaIIIGexPCRPrimer2 | |
AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA | |
>IlluminaNlaIIIGexSequencingPrimer | |
CCGACAGGTTCAGAGTTCTACAGTCCGACATG | |
>IlluminaSmallRNARTPrimer | |
CAAGCAGAAGACGGCATACGA | |
>Illumina5pRNAAdapter | |
GTTCAGAGTTCTACAGTCCGACGATC | |
>IlluminaRNAAdapter1 | |
TGGAATTCTCGGGTGCCAAGG | |
>IlluminaSmallRNA3pAdapter1 | |
ATCTCGTATGCCGTCTTCTGCTTG | |
>IlluminaSmallRNAPCRPrimer1 | |
CAAGCAGAAGACGGCATACGA | |
>IlluminaSmallRNAPCRPrimer2 | |
AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA | |
>IlluminaSmallRNASequencingPrimer | |
CGACAGGTTCAGAGTTCTACAGTCCGACGATC | |
>TruSeqUniversalAdapter | |
AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>TruSeqAdapterIndex1 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex2 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex3 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex4 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex5 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex6 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex7 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex8 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex9 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex10 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex11 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex12 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex13 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTCAACTCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex14 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex15 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGTCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex16 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCTCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex18 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex19 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGAAACTCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex20 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGGCCTTCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex21 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTTTCGGTCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex22 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTACGTTCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex23 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCACTCTTCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex25 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTGATATCTCGTATGCCGTCTTCTGCTTG | |
>TruSeqAdapterIndex27 | |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTCCTTTCTCGTATGCCGTCTTCTGCTTG | |
>IlluminaRNARTPrimer | |
GCCTTGGCACCCGAGAATTCCA | |
>IlluminaRNAPCRPrimer | |
AATGATACGGCGACCACCGAGATCTACACGTTCAGAGTTCTACAGTCCGA | |
>RNAPCRPrimerIndex1 | |
CAAGCAGAAGACGGCATACGAGATCGTGATGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex2 | |
CAAGCAGAAGACGGCATACGAGATACATCGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex3 | |
CAAGCAGAAGACGGCATACGAGATGCCTAAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex4 | |
CAAGCAGAAGACGGCATACGAGATTGGTCAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex5 | |
CAAGCAGAAGACGGCATACGAGATCACTGTGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex6 | |
CAAGCAGAAGACGGCATACGAGATATTGGCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex7 | |
CAAGCAGAAGACGGCATACGAGATGATCTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex8 | |
CAAGCAGAAGACGGCATACGAGATTCAAGTGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex9 | |
CAAGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex10 | |
CAAGCAGAAGACGGCATACGAGATAAGCTAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex11 | |
CAAGCAGAAGACGGCATACGAGATGTAGCCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex12 | |
CAAGCAGAAGACGGCATACGAGATTACAAGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex13 | |
CAAGCAGAAGACGGCATACGAGATTTGACTGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex14 | |
CAAGCAGAAGACGGCATACGAGATGGAACTGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex15 | |
CAAGCAGAAGACGGCATACGAGATTGACATGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex16 | |
CAAGCAGAAGACGGCATACGAGATGGACGGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex17 | |
CAAGCAGAAGACGGCATACGAGATCTCTACGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex18 | |
CAAGCAGAAGACGGCATACGAGATGCGGACGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex19 | |
CAAGCAGAAGACGGCATACGAGATTTTCACGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex20 | |
CAAGCAGAAGACGGCATACGAGATGGCCACGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex21 | |
CAAGCAGAAGACGGCATACGAGATCGAAACGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex22 | |
CAAGCAGAAGACGGCATACGAGATCGTACGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex23 | |
CAAGCAGAAGACGGCATACGAGATCCACTCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex24 | |
CAAGCAGAAGACGGCATACGAGATGCTACCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex25 | |
CAAGCAGAAGACGGCATACGAGATATCAGTGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex26 | |
CAAGCAGAAGACGGCATACGAGATGCTCATGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex27 | |
CAAGCAGAAGACGGCATACGAGATAGGAATGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex28 | |
CAAGCAGAAGACGGCATACGAGATCTTTTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex29 | |
CAAGCAGAAGACGGCATACGAGATTAGTTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex30 | |
CAAGCAGAAGACGGCATACGAGATCCGGTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex31 | |
CAAGCAGAAGACGGCATACGAGATATCGTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex32 | |
CAAGCAGAAGACGGCATACGAGATTGAGTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex33 | |
CAAGCAGAAGACGGCATACGAGATCGCCTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex34 | |
CAAGCAGAAGACGGCATACGAGATGCCATGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex35 | |
CAAGCAGAAGACGGCATACGAGATAAAATGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex36 | |
CAAGCAGAAGACGGCATACGAGATTGTTGGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex37 | |
CAAGCAGAAGACGGCATACGAGATATTCCGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex38 | |
CAAGCAGAAGACGGCATACGAGATAGCTAGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex39 | |
CAAGCAGAAGACGGCATACGAGATGTATAGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex40 | |
CAAGCAGAAGACGGCATACGAGATTCTGAGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex41 | |
CAAGCAGAAGACGGCATACGAGATGTCGTCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex42 | |
CAAGCAGAAGACGGCATACGAGATCGATTAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex43 | |
CAAGCAGAAGACGGCATACGAGATGCTGTAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex44 | |
CAAGCAGAAGACGGCATACGAGATATTATAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex45 | |
CAAGCAGAAGACGGCATACGAGATGAATGAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex46 | |
CAAGCAGAAGACGGCATACGAGATTCGGGAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex47 | |
CAAGCAGAAGACGGCATACGAGATCTTCGAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>RNAPCRPrimerIndex48 | |
CAAGCAGAAGACGGCATACGAGATTGCCGAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA | |
>ABIDynabeadEcoPOligo | |
CTGATCTAGAGGTACCGGATCCCAGCAGT | |
>ABISolid3AdapterA | |
CTGCCCCGGGTTCCTCATTCTCTCAGCAGCATG | |
>ABISolid3AdapterB | |
CCACTACGCCTCCGCTTTCCTCTCTATGGGCAGTCGGTGAT | |
>ABISolid35'AMPPrimer | |
CCACTACGCCTCCGCTTTCCTCTCTATG | |
>ABISolid33'AMPPrimer | |
CTGCCCCGGGTTCCTCATTCT | |
>ABISolid3EF1alphaSensePrimer | |
CATGTGTGTTGAGAGCTTC | |
>ABISolid3EF1alphaAntisensePrimer | |
GAAAACCAAAGTGGTCCAC | |
>ABISolid3GAPDHForwardPrimer | |
TTAGCACCCCTGGCCAAGG | |
>ABISolid3GAPDHReversePrimer | |
CTTACTCCTTGGAGGCCATG |
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