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Last active August 1, 2021 23:44
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Install Rstudio and the dependencies for eSIR on Ubuntu 20.04.2
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Ubuntu_prep.md

Install R, devtools, jags, rjags, eSIR , rstan, and Rstudio on Ubuntu 20.04.2

To install R, follow this to install R.

Follow this to install devtools.

Install jags and then rjags following

sudo apt-get install JAGS
R

In R console,

install.packages("rjags")

Then you should be ready to install eSIR in the R console:

library(devtools)
install_github("lilywang1988/eSIR")
library(eSIR)

To install rstan, we need to install V8 first:

sudo apt-get install libv8-dev

Then in the R console install rstan.

It would be extremely convenient to access the familar rstudio in ubuntu, so I installed the rstudio following this.

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