Created
September 30, 2020 19:21
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Building DAG of jobs... | |
Using shell: /usr/local/bin/bash | |
Provided cluster nodes: 500 | |
Job counts: | |
count jobs | |
1 targets | |
1 try_expand | |
2 | |
[Wed Sep 30 20:12:35 2020] | |
rule try_expand: | |
output: try/chr20.GATK_calls.indels.PASS.common_var_2.bcf, try/chr21.GATK_calls.indels.PASS.common_var_2.bcf, try/chr22.GATK_calls.indels.PASS.common_var_2.bcf | |
jobid: 1 | |
threads: 6 | |
touch try/chr20.GATK_calls.indels.PASS.common_var_2.bcf try/chr21.GATK_calls.indels.PASS.common_var_2.bcf try/chr22.GATK_calls.indels.PASS.common_var_2.bcf | |
Submitted job 1 with external jobid '824238 logs/cluster/try_expand/unique/jobid1_a0ad63bb-186c-48ed-90e6-1042bb67f27c.out'. | |
Waiting at most 20 seconds for missing files. | |
[Wed Sep 30 20:12:46 2020] | |
Finished job 1. | |
1 of 2 steps (50%) done | |
[Wed Sep 30 20:12:46 2020] | |
localrule targets: | |
input: try/chr20.GATK_calls.indels.PASS.common_var_2.bcf, try/chr21.GATK_calls.indels.PASS.common_var_2.bcf, try/chr22.GATK_calls.indels.PASS.common_var_2.bcf | |
log: try_logs/targets.log | |
jobid: 0 | |
[Wed Sep 30 20:12:46 2020] | |
Finished job 0. | |
2 of 2 steps (100%) done | |
Complete log: /nfs/users/nfs_t/tl11/script/snakemake_submit_wildcard_as_job/.snakemake/log/2020-09-30T201234.610022.snakemake.log |
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