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@liutiming
Created September 30, 2020 19:21
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Building DAG of jobs...
Using shell: /usr/local/bin/bash
Provided cluster nodes: 500
Job counts:
count jobs
1 targets
1 try_expand
2
[Wed Sep 30 20:12:35 2020]
rule try_expand:
output: try/chr20.GATK_calls.indels.PASS.common_var_2.bcf, try/chr21.GATK_calls.indels.PASS.common_var_2.bcf, try/chr22.GATK_calls.indels.PASS.common_var_2.bcf
jobid: 1
threads: 6
touch try/chr20.GATK_calls.indels.PASS.common_var_2.bcf try/chr21.GATK_calls.indels.PASS.common_var_2.bcf try/chr22.GATK_calls.indels.PASS.common_var_2.bcf
Submitted job 1 with external jobid '824238 logs/cluster/try_expand/unique/jobid1_a0ad63bb-186c-48ed-90e6-1042bb67f27c.out'.
Waiting at most 20 seconds for missing files.
[Wed Sep 30 20:12:46 2020]
Finished job 1.
1 of 2 steps (50%) done
[Wed Sep 30 20:12:46 2020]
localrule targets:
input: try/chr20.GATK_calls.indels.PASS.common_var_2.bcf, try/chr21.GATK_calls.indels.PASS.common_var_2.bcf, try/chr22.GATK_calls.indels.PASS.common_var_2.bcf
log: try_logs/targets.log
jobid: 0
[Wed Sep 30 20:12:46 2020]
Finished job 0.
2 of 2 steps (100%) done
Complete log: /nfs/users/nfs_t/tl11/script/snakemake_submit_wildcard_as_job/.snakemake/log/2020-09-30T201234.610022.snakemake.log
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