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@loretoparisi
Created February 13, 2020 19:02
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Scipy libblas error Ubuntu 18.04
(.env) ubuntu@blackrabbit:~/jupyter_notebooks/loreto_parisi/singing/mellotron$ pip install -r requirements.txt
Requirement already satisfied: matplotlib==2.1.0 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from -r requirements.txt (line 1)) (2.1.0)
Requirement already satisfied: tensorflow==1.15.2 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from -r requirements.txt (line 2)) (1.15.2)
Requirement already satisfied: inflect==0.2.5 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from -r requirements.txt (line 3)) (0.2.5)
Collecting librosa==0.6.0 (from -r requirements.txt (line 4))
Collecting scipy==1.0.0 (from -r requirements.txt (line 5))
Using cached https://files.pythonhosted.org/packages/d0/73/76fc6ea21818eed0de8dd38e1e9586725578864169a2b31acdeffb9131c8/scipy-1.0.0.tar.gz
Collecting tensorboardX==1.1 (from -r requirements.txt (line 6))
Using cached https://files.pythonhosted.org/packages/0a/95/b5eb020dcda7568cafd9a035f61bffa38570995a2a7d024283513a230406/tensorboardX-1.1-py2.py3-none-any.whl
Collecting Unidecode==1.0.22 (from -r requirements.txt (line 7))
Using cached https://files.pythonhosted.org/packages/59/ef/67085e30e8bbcdd76e2f0a4ad8151c13a2c5bce77c85f8cad6e1f16fb141/Unidecode-1.0.22-py2.py3-none-any.whl
Collecting pillow (from -r requirements.txt (line 8))
Using cached https://files.pythonhosted.org/packages/f5/79/b2d5695d1a931474fa68b68ec93bdf08ba9acbc4d6b3b628eb6aac81d11c/Pillow-7.0.0-cp37-cp37m-manylinux1_x86_64.whl
Collecting nltk==3.4.5 (from -r requirements.txt (line 9))
Collecting jamo==0.4.1 (from -r requirements.txt (line 10))
Using cached https://files.pythonhosted.org/packages/ac/cc/49812faae67f9a24be6ddaf58a2cf7e8c3cbfcf5b762d9414f7103d2ea2c/jamo-0.4.1-py3-none-any.whl
Collecting music21 (from -r requirements.txt (line 11))
Requirement already satisfied: numpy>=1.7.1 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from matplotlib==2.1.0->-r requirements.txt (line 1)) (1.17.3)
Requirement already satisfied: six>=1.10 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from matplotlib==2.1.0->-r requirements.txt (line 1)) (1.14.0)
Requirement already satisfied: python-dateutil>=2.0 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from matplotlib==2.1.0->-r requirements.txt (line 1)) (2.8.1)
Requirement already satisfied: pytz in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from matplotlib==2.1.0->-r requirements.txt (line 1)) (2019.3)
Requirement already satisfied: cycler>=0.10 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from matplotlib==2.1.0->-r requirements.txt (line 1)) (0.10.0)
Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from matplotlib==2.1.0->-r requirements.txt (line 1)) (2.4.6)
Requirement already satisfied: astor>=0.6.0 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (0.8.1)
Requirement already satisfied: termcolor>=1.1.0 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (1.1.0)
Requirement already satisfied: absl-py>=0.7.0 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (0.9.0)
Requirement already satisfied: protobuf>=3.6.1 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (3.11.3)
Requirement already satisfied: grpcio>=1.8.6 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (1.27.1)
Requirement already satisfied: tensorflow-estimator==1.15.1 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (1.15.1)
Requirement already satisfied: wrapt>=1.11.1 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (1.11.2)
Requirement already satisfied: tensorboard<1.16.0,>=1.15.0 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (1.15.0)
Requirement already satisfied: keras-preprocessing>=1.0.5 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (1.1.0)
Requirement already satisfied: opt-einsum>=2.3.2 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (3.1.0)
Requirement already satisfied: wheel>=0.26; python_version >= "3" in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (0.34.2)
Requirement already satisfied: keras-applications>=1.0.8 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (1.0.8)
Requirement already satisfied: google-pasta>=0.1.6 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (0.1.8)
Requirement already satisfied: gast==0.2.2 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorflow==1.15.2->-r requirements.txt (line 2)) (0.2.2)
Requirement already satisfied: joblib>=0.7.0 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from librosa==0.6.0->-r requirements.txt (line 4)) (0.14.1)
Requirement already satisfied: decorator>=3.0.0 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from librosa==0.6.0->-r requirements.txt (line 4)) (4.4.1)
Requirement already satisfied: audioread>=2.0.0 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from librosa==0.6.0->-r requirements.txt (line 4)) (2.1.8)
Collecting resampy>=0.2.0 (from librosa==0.6.0->-r requirements.txt (line 4))
Collecting scikit-learn!=0.19.0,>=0.14.0 (from librosa==0.6.0->-r requirements.txt (line 4))
Using cached https://files.pythonhosted.org/packages/73/db/7d8204ddba84ab5d1e4fd1af8f82bbe39c589488bee71e45c662f4144010/scikit_learn-0.22.1-cp37-cp37m-manylinux1_x86_64.whl
Requirement already satisfied: setuptools in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from protobuf>=3.6.1->tensorflow==1.15.2->-r requirements.txt (line 2)) (41.2.0)
Requirement already satisfied: markdown>=2.6.8 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorboard<1.16.0,>=1.15.0->tensorflow==1.15.2->-r requirements.txt (line 2)) (3.2.1)
Requirement already satisfied: werkzeug>=0.11.15 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from tensorboard<1.16.0,>=1.15.0->tensorflow==1.15.2->-r requirements.txt (line 2)) (1.0.0)
Requirement already satisfied: h5py in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from keras-applications>=1.0.8->tensorflow==1.15.2->-r requirements.txt (line 2)) (2.10.0)
Requirement already satisfied: numba>=0.32 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from resampy>=0.2.0->librosa==0.6.0->-r requirements.txt (line 4)) (0.48.0)
Requirement already satisfied: llvmlite<0.32.0,>=0.31.0dev0 in /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages (from numba>=0.32->resampy>=0.2.0->librosa==0.6.0->-r requirements.txt (line 4)) (0.31.0)
Building wheels for collected packages: scipy
Building wheel for scipy (setup.py) ... error
ERROR: Command errored out with exit status 1:
command: /home/ubuntu/jupyter_notebooks/.env/bin/python3.7 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-z9bzmes8/scipy/setup.py'"'"'; __file__='"'"'/tmp/pip-install-z9bzmes8/scipy/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-k442u7_h --python-tag cp37
cwd: /tmp/pip-install-z9bzmes8/scipy/
Complete output (1465 lines):
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas,lapack not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
customize UnixCCompiler
libraries flame not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries lapack_atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries tatlas,tatlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
customize UnixCCompiler
libraries lapack_atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries satlas,satlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries satlas,satlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries satlas,satlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
customize UnixCCompiler
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries lapack_atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
customize UnixCCompiler
libraries lapack_atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
customize UnixCCompiler
customize UnixCCompiler
<class 'numpy.distutils.system_info.atlas_info'>
customize UnixCCompiler
get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']'
customize Gnu95FCompiler
Could not locate executable gfortran
Could not locate executable f95
customize IntelFCompiler
Could not locate executable ifort
Could not locate executable ifc
customize LaheyFCompiler
Could not locate executable lf95
customize PGroupFCompiler
Could not locate executable pgfortran
customize AbsoftFCompiler
Could not locate executable f90
Could not locate executable f77
customize NAGFCompiler
customize VastFCompiler
customize CompaqFCompiler
Could not locate executable fort
customize IntelItaniumFCompiler
Could not locate executable efort
Could not locate executable efc
customize IntelEM64TFCompiler
customize GnuFCompiler
Could not locate executable g77
customize G95FCompiler
Could not locate executable g95
customize PathScaleFCompiler
Could not locate executable pathf95
customize NAGFORCompiler
Could not locate executable nagfor
don't know how to compile Fortran code on platform 'posix'
compiling '_configtest.c':
/* This file is generated from numpy/distutils/system_info.py */
void ATL_buildinfo(void);
int main(void) {
ATL_buildinfo();
return 0;
}
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fdebug-prefix-map=/build/python3.7-WA8NgD/python3.7-3.7.6=. -fstack-protector-strong -Wformat -Werror=format-security -g -fdebug-prefix-map=/build/python3.7-WA8NgD/python3.7-3.7.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-c'
x86_64-linux-gnu-gcc: _configtest.c
x86_64-linux-gnu-gcc -pthread _configtest.o -lf77blas -lcblas -latlas -o _configtest
customize UnixCCompiler
customize UnixCCompiler
FOUND:
language = f77
libraries = ['lapack', 'f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
define_macros = [('NO_ATLAS_INFO', -1)]
FOUND:
language = f77
libraries = ['lapack', 'f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
define_macros = [('NO_ATLAS_INFO', -1)]
Running from scipy source directory.
Splitting linalg.interpolative Fortran source files
/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/system_info.py:782: UserWarning: Specified path /home/ubuntu/jupyter_notebooks/.env/include/python3.7m is invalid.
return self.get_paths(self.section, key)
/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/system_info.py:782: UserWarning: Specified path /usr/local/include/python3.7m is invalid.
return self.get_paths(self.section, key)
blas_opt_info:
blas_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
customize UnixCCompiler
libraries blis not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries tatlas not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
customize UnixCCompiler
libraries satlas not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
customize UnixCCompiler
compiling '_configtest.c':
/* This file is generated from numpy/distutils/system_info.py */
void ATL_buildinfo(void);
int main(void) {
ATL_buildinfo();
return 0;
}
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fdebug-prefix-map=/build/python3.7-WA8NgD/python3.7-3.7.6=. -fstack-protector-strong -Wformat -Werror=format-security -g -fdebug-prefix-map=/build/python3.7-WA8NgD/python3.7-3.7.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-c'
x86_64-linux-gnu-gcc: _configtest.c
x86_64-linux-gnu-gcc -pthread _configtest.o -lf77blas -lcblas -latlas -o _configtest
customize UnixCCompiler
customize UnixCCompiler
FOUND:
language = c
define_macros = [('HAVE_CBLAS', None), ('NO_ATLAS_INFO', -1)]
libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
FOUND:
language = c
define_macros = [('HAVE_CBLAS', None), ('NO_ATLAS_INFO', -1)]
libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
non-existing path in 'scipy/sparse': 'sparsetools/sparsetools_impl.h'
non-existing path in 'scipy/sparse': 'sparsetools/bsr_impl.h'
non-existing path in 'scipy/sparse': 'sparsetools/csc_impl.h'
non-existing path in 'scipy/sparse': 'sparsetools/csr_impl.h'
non-existing path in 'scipy/sparse': 'sparsetools/other_impl.h'
running bdist_wheel
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
creating build
creating build/src.linux-x86_64-3.7
creating build/src.linux-x86_64-3.7/scipy
building library "dfftpack" sources
building library "fftpack" sources
building library "mach" sources
building library "quadpack" sources
building library "lsoda" sources
building library "vode" sources
building library "dop" sources
building library "fitpack" sources
building library "fwrappers" sources
building library "odrpack" sources
building library "minpack" sources
building library "rootfind" sources
building library "superlu_src" sources
building library "arpack_scipy" sources
building library "sc_c_misc" sources
building library "sc_cephes" sources
building library "sc_mach" sources
building library "sc_amos" sources
building library "sc_cdf" sources
building library "sc_specfun" sources
building library "statlib" sources
building extension "scipy.cluster._vq" sources
building extension "scipy.cluster._hierarchy" sources
building extension "scipy.cluster._optimal_leaf_ordering" sources
building extension "scipy.fftpack._fftpack" sources
creating build/src.linux-x86_64-3.7/scipy/fftpack
creating build/src.linux-x86_64-3.7/scipy/fftpack/src
conv_template:> build/src.linux-x86_64-3.7/scipy/fftpack/src/dct.c
conv_template:> build/src.linux-x86_64-3.7/scipy/fftpack/src/dst.c
f2py options: []
f2py: scipy/fftpack/fftpack.pyf
Reading fortran codes...
Reading file 'scipy/fftpack/fftpack.pyf' (format:free)
Line #86 in scipy/fftpack/fftpack.pyf:" /* Single precision version */ "
crackline:2: No pattern for line
Post-processing...
Block: _fftpack
Block: zfft
Block: drfft
Block: zrfft
Block: zfftnd
Block: destroy_zfft_cache
Block: destroy_zfftnd_cache
Block: destroy_drfft_cache
Block: cfft
Block: rfft
Block: crfft
Block: cfftnd
Block: destroy_cfft_cache
Block: destroy_cfftnd_cache
Block: destroy_rfft_cache
Block: ddct1
Block: ddct2
Block: ddct3
Block: dct1
Block: dct2
Block: dct3
Block: destroy_ddct2_cache
Block: destroy_ddct1_cache
Block: destroy_dct2_cache
Block: destroy_dct1_cache
Block: ddst1
Block: ddst2
Block: ddst3
Block: dst1
Block: dst2
Block: dst3
Block: destroy_ddst2_cache
Block: destroy_ddst1_cache
Block: destroy_dst2_cache
Block: destroy_dst1_cache
Post-processing (stage 2)...
Building modules...
Building module "_fftpack"...
Constructing wrapper function "zfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = zfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "drfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = drfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "zrfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = zrfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "zfftnd"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = zfftnd(x,[s,direction,normalize,overwrite_x])
Constructing wrapper function "destroy_zfft_cache"...
destroy_zfft_cache()
Constructing wrapper function "destroy_zfftnd_cache"...
destroy_zfftnd_cache()
Constructing wrapper function "destroy_drfft_cache"...
destroy_drfft_cache()
Constructing wrapper function "cfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = cfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "rfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = rfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "crfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = crfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "cfftnd"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = cfftnd(x,[s,direction,normalize,overwrite_x])
Constructing wrapper function "destroy_cfft_cache"...
destroy_cfft_cache()
Constructing wrapper function "destroy_cfftnd_cache"...
destroy_cfftnd_cache()
Constructing wrapper function "destroy_rfft_cache"...
destroy_rfft_cache()
Constructing wrapper function "ddct1"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddct1(x,[n,normalize,overwrite_x])
Constructing wrapper function "ddct2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddct2(x,[n,normalize,overwrite_x])
Constructing wrapper function "ddct3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddct3(x,[n,normalize,overwrite_x])
Constructing wrapper function "dct1"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dct1(x,[n,normalize,overwrite_x])
Constructing wrapper function "dct2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dct2(x,[n,normalize,overwrite_x])
Constructing wrapper function "dct3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dct3(x,[n,normalize,overwrite_x])
Constructing wrapper function "destroy_ddct2_cache"...
destroy_ddct2_cache()
Constructing wrapper function "destroy_ddct1_cache"...
destroy_ddct1_cache()
Constructing wrapper function "destroy_dct2_cache"...
destroy_dct2_cache()
Constructing wrapper function "destroy_dct1_cache"...
destroy_dct1_cache()
Constructing wrapper function "ddst1"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddst1(x,[n,normalize,overwrite_x])
Constructing wrapper function "ddst2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddst2(x,[n,normalize,overwrite_x])
Constructing wrapper function "ddst3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddst3(x,[n,normalize,overwrite_x])
Constructing wrapper function "dst1"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dst1(x,[n,normalize,overwrite_x])
Constructing wrapper function "dst2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dst2(x,[n,normalize,overwrite_x])
Constructing wrapper function "dst3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dst3(x,[n,normalize,overwrite_x])
Constructing wrapper function "destroy_ddst2_cache"...
destroy_ddst2_cache()
Constructing wrapper function "destroy_ddst1_cache"...
destroy_ddst1_cache()
Constructing wrapper function "destroy_dst2_cache"...
destroy_dst2_cache()
Constructing wrapper function "destroy_dst1_cache"...
destroy_dst1_cache()
Wrote C/API module "_fftpack" to file "build/src.linux-x86_64-3.7/scipy/fftpack/_fftpackmodule.c"
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack' to include_dirs.
creating build/src.linux-x86_64-3.7/build
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack
copying /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack
copying /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack
building extension "scipy.fftpack.convolve" sources
f2py options: []
f2py: scipy/fftpack/convolve.pyf
Reading fortran codes...
Reading file 'scipy/fftpack/convolve.pyf' (format:free)
Post-processing...
Block: convolve__user__routines
Block: kernel_func
Block: convolve
Block: init_convolution_kernel
In: scipy/fftpack/convolve.pyf:convolve:unknown_interface:init_convolution_kernel
get_useparameters: no module convolve__user__routines info used by init_convolution_kernel
Block: destroy_convolve_cache
Block: convolve
Block: convolve_z
Post-processing (stage 2)...
Building modules...
Constructing call-back function "cb_kernel_func_in_convolve__user__routines"
def kernel_func(k): return kernel_func
Building module "convolve"...
Constructing wrapper function "init_convolution_kernel"...
omega = init_convolution_kernel(n,kernel_func,[d,zero_nyquist,kernel_func_extra_args])
Constructing wrapper function "destroy_convolve_cache"...
destroy_convolve_cache()
Constructing wrapper function "convolve"...
y = convolve(x,omega,[swap_real_imag,overwrite_x])
Constructing wrapper function "convolve_z"...
y = convolve_z(x,omega_real,omega_imag,[overwrite_x])
Wrote C/API module "convolve" to file "build/src.linux-x86_64-3.7/scipy/fftpack/convolvemodule.c"
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack' to include_dirs.
building extension "scipy.integrate._quadpack" sources
building extension "scipy.integrate._odepack" sources
building extension "scipy.integrate.vode" sources
creating build/src.linux-x86_64-3.7/scipy/integrate
f2py options: []
f2py: scipy/integrate/vode.pyf
Reading fortran codes...
Reading file 'scipy/integrate/vode.pyf' (format:free)
Post-processing...
Block: dvode__user__routines
Block: dvode_user_interface
Block: f
Block: jac
Block: zvode__user__routines
Block: zvode_user_interface
Block: f
Block: jac
Block: vode
Block: dvode
In: scipy/integrate/vode.pyf:vode:unknown_interface:dvode
get_useparameters: no module dvode__user__routines info used by dvode
Block: zvode
In: scipy/integrate/vode.pyf:vode:unknown_interface:zvode
get_useparameters: no module zvode__user__routines info used by zvode
Post-processing (stage 2)...
Building modules...
Constructing call-back function "cb_f_in_dvode__user__routines"
def f(t,y): return ydot
Constructing call-back function "cb_jac_in_dvode__user__routines"
def jac(t,y): return jac
Constructing call-back function "cb_f_in_zvode__user__routines"
def f(t,y): return ydot
Constructing call-back function "cb_jac_in_zvode__user__routines"
def jac(t,y): return jac
Building module "vode"...
Constructing wrapper function "dvode"...
warning: callstatement is defined without callprotoargument
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y,t,istate = dvode(f,jac,y,t,tout,rtol,atol,itask,istate,rwork,iwork,mf,[f_extra_args,jac_extra_args,overwrite_y])
Constructing wrapper function "zvode"...
warning: callstatement is defined without callprotoargument
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y,t,istate = zvode(f,jac,y,t,tout,rtol,atol,itask,istate,zwork,rwork,iwork,mf,[f_extra_args,jac_extra_args,overwrite_y])
Wrote C/API module "vode" to file "build/src.linux-x86_64-3.7/scipy/integrate/vodemodule.c"
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate' to include_dirs.
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate
copying /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate
copying /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate
building extension "scipy.integrate.lsoda" sources
f2py options: []
f2py: scipy/integrate/lsoda.pyf
Reading fortran codes...
Reading file 'scipy/integrate/lsoda.pyf' (format:free)
Post-processing...
Block: lsoda__user__routines
Block: lsoda_user_interface
Block: f
Block: jac
Block: lsoda
Block: lsoda
In: scipy/integrate/lsoda.pyf:lsoda:unknown_interface:lsoda
get_useparameters: no module lsoda__user__routines info used by lsoda
Post-processing (stage 2)...
Building modules...
Constructing call-back function "cb_f_in_lsoda__user__routines"
def f(t,y): return ydot
Constructing call-back function "cb_jac_in_lsoda__user__routines"
def jac(t,y): return jac
Building module "lsoda"...
Constructing wrapper function "lsoda"...
warning: callstatement is defined without callprotoargument
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y,t,istate = lsoda(f,y,t,tout,rtol,atol,itask,istate,rwork,iwork,jac,jt,[f_extra_args,overwrite_y,jac_extra_args])
Wrote C/API module "lsoda" to file "build/src.linux-x86_64-3.7/scipy/integrate/lsodamodule.c"
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate' to include_dirs.
building extension "scipy.integrate._dop" sources
f2py options: []
f2py: scipy/integrate/dop.pyf
Reading fortran codes...
Reading file 'scipy/integrate/dop.pyf' (format:free)
Post-processing...
Block: __user__routines
Block: fcn
Block: solout
Block: _dop
Block: dopri5
In: scipy/integrate/dop.pyf:_dop:unknown_interface:dopri5
get_useparameters: no module __user__routines info used by dopri5
Block: dop853
In: scipy/integrate/dop.pyf:_dop:unknown_interface:dop853
get_useparameters: no module __user__routines info used by dop853
Post-processing (stage 2)...
Building modules...
Constructing call-back function "cb_fcn_in___user__routines"
def fcn(x,y): return f
Constructing call-back function "cb_solout_in___user__routines"
def solout(nr,xold,x,y,con,icomp,[nd]): return irtn
Building module "_dop"...
Constructing wrapper function "dopri5"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y,iwork,idid = dopri5(fcn,x,y,xend,rtol,atol,solout,iout,work,iwork,[fcn_extra_args,overwrite_y,solout_extra_args])
Constructing wrapper function "dop853"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y,iwork,idid = dop853(fcn,x,y,xend,rtol,atol,solout,iout,work,iwork,[fcn_extra_args,overwrite_y,solout_extra_args])
Wrote C/API module "_dop" to file "build/src.linux-x86_64-3.7/scipy/integrate/_dopmodule.c"
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate' to include_dirs.
building extension "scipy.integrate._test_multivariate" sources
building extension "scipy.integrate._test_odeint_banded" sources
f2py options: []
f2py:> build/src.linux-x86_64-3.7/scipy/integrate/_test_odeint_bandedmodule.c
Reading fortran codes...
Reading file 'scipy/integrate/tests/banded5x5.f' (format:fix,strict)
Post-processing...
Block: _test_odeint_banded
Block: jacobian
Block: getbands
Block: banded5x5
Block: banded5x5_jac
Block: banded5x5_bjac
Block: banded5x5_solve
Post-processing (stage 2)...
Building modules...
Building module "_test_odeint_banded"...
Constructing wrapper function "getbands"...
jac = getbands()
Constructing wrapper function "banded5x5"...
banded5x5(t,y,f,[n])
Constructing wrapper function "banded5x5_jac"...
banded5x5_jac(t,y,ml,mu,jac,[n,nrowpd])
Constructing wrapper function "banded5x5_bjac"...
banded5x5_bjac(t,y,ml,mu,bjac,[n,nrowpd])
Constructing wrapper function "banded5x5_solve"...
nst,nfe,nje = banded5x5_solve(y,nsteps,dt,jt)
Constructing COMMON block support for "jac"...
bands
Wrote C/API module "_test_odeint_banded" to file "build/src.linux-x86_64-3.7/scipy/integrate/_test_odeint_bandedmodule.c"
Fortran 77 wrappers are saved to "build/src.linux-x86_64-3.7/scipy/integrate/_test_odeint_banded-f2pywrappers.f"
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate' to include_dirs.
adding 'build/src.linux-x86_64-3.7/scipy/integrate/_test_odeint_banded-f2pywrappers.f' to sources.
building extension "scipy.interpolate.interpnd" sources
building extension "scipy.interpolate._ppoly" sources
building extension "scipy.interpolate._bspl" sources
building extension "scipy.interpolate._fitpack" sources
building extension "scipy.interpolate.dfitpack" sources
creating build/src.linux-x86_64-3.7/scipy/interpolate
creating build/src.linux-x86_64-3.7/scipy/interpolate/src
f2py options: []
f2py: scipy/interpolate/src/fitpack.pyf
Reading fortran codes...
Reading file 'scipy/interpolate/src/fitpack.pyf' (format:free)
Post-processing...
Block: dfitpack
Block: fpchec
Block: splev
Block: splder
Block: splint
Block: sproot
Block: spalde
Block: curfit
Block: percur
Block: parcur
Block: fpcurf0
Block: fpcurf1
Block: fpcurfm1
Block: bispev
Block: parder
Block: bispeu
Block: pardeu
Block: surfit_smth
Block: surfit_lsq
Block: spherfit_smth
Block: spherfit_lsq
Block: regrid_smth
Block: regrid_smth_spher
Block: dblint
Post-processing (stage 2)...
Building modules...
Building module "dfitpack"...
Constructing wrapper function "fpchec"...
ier = fpchec(x,t,k)
Constructing wrapper function "splev"...
y = splev(t,c,k,x,[e])
Constructing wrapper function "splder"...
y = splder(t,c,k,x,[nu,e])
Creating wrapper for Fortran function "splint"("splint")...
Constructing wrapper function "splint"...
splint = splint(t,c,k,a,b)
Constructing wrapper function "sproot"...
zero,m,ier = sproot(t,c,[mest])
Constructing wrapper function "spalde"...
d,ier = spalde(t,c,k,x)
Constructing wrapper function "curfit"...
n,c,fp,ier = curfit(iopt,x,y,w,t,wrk,iwrk,[xb,xe,k,s])
Constructing wrapper function "percur"...
n,c,fp,ier = percur(iopt,x,y,w,t,wrk,iwrk,[k,s])
Constructing wrapper function "parcur"...
n,c,fp,ier = parcur(iopt,ipar,idim,u,x,w,ub,ue,t,wrk,iwrk,[k,s])
Constructing wrapper function "fpcurf0"...
x,y,w,xb,xe,k,s,n,t,c,fp,fpint,nrdata,ier = fpcurf0(x,y,k,[w,xb,xe,s,nest])
Constructing wrapper function "fpcurf1"...
x,y,w,xb,xe,k,s,n,t,c,fp,fpint,nrdata,ier = fpcurf1(x,y,w,xb,xe,k,s,n,t,c,fp,fpint,nrdata,ier,[overwrite_x,overwrite_y,overwrite_w,overwrite_t,overwrite_c,overwrite_fpint,overwrite_nrdata])
Constructing wrapper function "fpcurfm1"...
x,y,w,xb,xe,k,s,n,t,c,fp,fpint,nrdata,ier = fpcurfm1(x,y,k,t,[w,xb,xe,overwrite_t])
Constructing wrapper function "bispev"...
z,ier = bispev(tx,ty,c,kx,ky,x,y)
Constructing wrapper function "parder"...
z,ier = parder(tx,ty,c,kx,ky,nux,nuy,x,y)
Constructing wrapper function "bispeu"...
z,ier = bispeu(tx,ty,c,kx,ky,x,y)
Constructing wrapper function "pardeu"...
z,ier = pardeu(tx,ty,c,kx,ky,nux,nuy,x,y)
Constructing wrapper function "surfit_smth"...
nx,tx,ny,ty,c,fp,wrk1,ier = surfit_smth(x,y,z,[w,xb,xe,yb,ye,kx,ky,s,nxest,nyest,eps,lwrk2])
Constructing wrapper function "surfit_lsq"...
tx,ty,c,fp,ier = surfit_lsq(x,y,z,tx,ty,[w,xb,xe,yb,ye,kx,ky,eps,lwrk2,overwrite_tx,overwrite_ty])
Constructing wrapper function "spherfit_smth"...
nt,tt,np,tp,c,fp,ier = spherfit_smth(teta,phi,r,[w,s,eps])
Constructing wrapper function "spherfit_lsq"...
tt,tp,c,fp,ier = spherfit_lsq(teta,phi,r,tt,tp,[w,eps,overwrite_tt,overwrite_tp])
Constructing wrapper function "regrid_smth"...
nx,tx,ny,ty,c,fp,ier = regrid_smth(x,y,z,[xb,xe,yb,ye,kx,ky,s])
Constructing wrapper function "regrid_smth_spher"...
nu,tu,nv,tv,c,fp,ier = regrid_smth_spher(iopt,ider,u,v,r,[r0,r1,s])
Creating wrapper for Fortran function "dblint"("dblint")...
Constructing wrapper function "dblint"...
dblint = dblint(tx,ty,c,kx,ky,xb,xe,yb,ye)
Wrote C/API module "dfitpack" to file "build/src.linux-x86_64-3.7/scipy/interpolate/src/dfitpackmodule.c"
Fortran 77 wrappers are saved to "build/src.linux-x86_64-3.7/scipy/interpolate/src/dfitpack-f2pywrappers.f"
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/interpolate/src/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/interpolate/src' to include_dirs.
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/interpolate
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/interpolate/src
copying /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/interpolate/src
copying /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/interpolate/src
adding 'build/src.linux-x86_64-3.7/scipy/interpolate/src/dfitpack-f2pywrappers.f' to sources.
building extension "scipy.interpolate._interpolate" sources
building extension "scipy.io._test_fortran" sources
creating build/src.linux-x86_64-3.7/scipy/io
f2py options: []
f2py: scipy/io/_test_fortran.pyf
Reading fortran codes...
Reading file 'scipy/io/_test_fortran.pyf' (format:free)
Post-processing...
Block: _test_fortran
Block: read_unformatted_double
Block: read_unformatted_int
Block: read_unformatted_mixed
Post-processing (stage 2)...
Building modules...
Building module "_test_fortran"...
Constructing wrapper function "read_unformatted_double"...
a = read_unformatted_double(m,n,k,filename)
Constructing wrapper function "read_unformatted_int"...
a = read_unformatted_int(m,n,k,filename)
Constructing wrapper function "read_unformatted_mixed"...
a,b = read_unformatted_mixed(m,n,k,filename)
Wrote C/API module "_test_fortran" to file "build/src.linux-x86_64-3.7/scipy/io/_test_fortranmodule.c"
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/io/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/io' to include_dirs.
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/io
copying /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/io
copying /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/io
building extension "scipy.io.matlab.streams" sources
building extension "scipy.io.matlab.mio_utils" sources
building extension "scipy.io.matlab.mio5_utils" sources
building extension "scipy.linalg._fblas" sources
creating build/src.linux-x86_64-3.7/scipy/linalg
from_template:> build/src.linux-x86_64-3.7/scipy/linalg/fblas.pyf
Including file scipy/linalg/fblas_l1.pyf.src
Including file scipy/linalg/fblas_l2.pyf.src
Including file scipy/linalg/fblas_l3.pyf.src
Mismatch in number of replacements (base <prefix=s,d,c,z>) for <__l1=->. Ignoring.
Mismatch in number of replacements (base <prefix6=s,d,c,z,c,z>) for <prefix=s,d,c,z>. Ignoring.
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg
f2py options: []
f2py: build/src.linux-x86_64-3.7/scipy/linalg/fblas.pyf
Reading fortran codes...
Reading file 'build/src.linux-x86_64-3.7/scipy/linalg/fblas.pyf' (format:free)
Post-processing...
Block: _fblas
Block: srotg
Block: drotg
Block: crotg
Block: zrotg
Block: srotmg
Block: drotmg
Block: srot
Block: drot
Block: csrot
Block: zdrot
Block: srotm
Block: drotm
Block: sswap
Block: dswap
Block: cswap
Block: zswap
Block: sscal
Block: dscal
Block: cscal
Block: zscal
Block: csscal
Block: zdscal
Block: scopy
Block: dcopy
Block: ccopy
Block: zcopy
Block: saxpy
Block: daxpy
Block: caxpy
Block: zaxpy
Block: sdot
Block: ddot
Block: cdotu
Block: zdotu
Block: cdotc
Block: zdotc
Block: snrm2
Block: scnrm2
Block: dnrm2
Block: dznrm2
Block: sasum
Block: scasum
Block: dasum
Block: dzasum
Block: isamax
Block: idamax
Block: icamax
Block: izamax
Block: sgemv
Block: dgemv
Block: cgemv
Block: zgemv
Block: sgbmv
Block: dgbmv
Block: cgbmv
Block: zgbmv
Block: ssbmv
Block: dsbmv
Block: chbmv
Block: zhbmv
Block: sspmv
Block: dspmv
Block: cspmv
Block: zspmv
Block: chpmv
Block: zhpmv
Block: ssymv
Block: dsymv
Block: chemv
Block: zhemv
Block: sger
Block: dger
Block: cgeru
Block: zgeru
Block: cgerc
Block: zgerc
Block: ssyr
Block: dsyr
Block: csyr
Block: zsyr
Block: cher
Block: zher
Block: ssyr2
Block: dsyr2
Block: cher2
Block: zher2
Block: sspr
Block: dspr
Block: cspr
Block: zspr
Block: chpr
Block: zhpr
Block: sspr2
Block: dspr2
Block: chpr2
Block: zhpr2
Block: stbsv
Block: dtbsv
Block: ctbsv
Block: ztbsv
Block: stpsv
Block: dtpsv
Block: ctpsv
Block: ztpsv
Block: strmv
Block: dtrmv
Block: ctrmv
Block: ztrmv
Block: strsv
Block: dtrsv
Block: ctrsv
Block: ztrsv
Block: stbmv
Block: dtbmv
Block: ctbmv
Block: ztbmv
Block: stpmv
Block: dtpmv
Block: ctpmv
Block: ztpmv
Block: sgemm
Block: dgemm
Block: cgemm
Block: zgemm
Block: ssymm
Block: dsymm
Block: csymm
Block: zsymm
Block: chemm
Block: zhemm
Block: ssyrk
Block: dsyrk
Block: csyrk
Block: zsyrk
Block: cherk
Block: zherk
Block: ssyr2k
Block: dsyr2k
Block: csyr2k
Block: zsyr2k
Block: cher2k
Block: zher2k
Block: strmm
Block: dtrmm
Block: ctrmm
Block: ztrmm
Block: strsm
Block: dtrsm
Block: ctrsm
Block: ztrsm
Post-processing (stage 2)...
Building modules...
Building module "_fblas"...
Constructing wrapper function "srotg"...
c,s = srotg(a,b)
Constructing wrapper function "drotg"...
c,s = drotg(a,b)
Constructing wrapper function "crotg"...
c,s = crotg(a,b)
Constructing wrapper function "zrotg"...
c,s = zrotg(a,b)
Constructing wrapper function "srotmg"...
param = srotmg(d1,d2,x1,y1)
Constructing wrapper function "drotmg"...
param = drotmg(d1,d2,x1,y1)
Constructing wrapper function "srot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = srot(x,y,c,s,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "drot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = drot(x,y,c,s,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "csrot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = csrot(x,y,c,s,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "zdrot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = zdrot(x,y,c,s,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "srotm"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = srotm(x,y,param,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "drotm"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = drotm(x,y,param,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "sswap"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = sswap(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "dswap"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = dswap(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "cswap"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = cswap(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "zswap"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = zswap(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "sscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = sscal(a,x,[n,offx,incx])
Constructing wrapper function "dscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = dscal(a,x,[n,offx,incx])
Constructing wrapper function "cscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = cscal(a,x,[n,offx,incx])
Constructing wrapper function "zscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = zscal(a,x,[n,offx,incx])
Constructing wrapper function "csscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = csscal(a,x,[n,offx,incx,overwrite_x])
Constructing wrapper function "zdscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = zdscal(a,x,[n,offx,incx,overwrite_x])
Constructing wrapper function "scopy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = scopy(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "dcopy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dcopy(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "ccopy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ccopy(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "zcopy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = zcopy(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "saxpy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
z = saxpy(x,y,[n,a,offx,incx,offy,incy])
Constructing wrapper function "daxpy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
z = daxpy(x,y,[n,a,offx,incx,offy,incy])
Constructing wrapper function "caxpy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
z = caxpy(x,y,[n,a,offx,incx,offy,incy])
Constructing wrapper function "zaxpy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
z = zaxpy(x,y,[n,a,offx,incx,offy,incy])
Creating wrapper for Fortran function "sdot"("wsdot ")...
Constructing wrapper function "sdot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = sdot(x,y,[n,offx,incx,offy,incy])
Creating wrapper for Fortran function "ddot"("ddot")...
Constructing wrapper function "ddot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = ddot(x,y,[n,offx,incx,offy,incy])
Creating wrapper for Fortran function "cdotu"("wcdotu ")...
Constructing wrapper function "cdotu"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = cdotu(x,y,[n,offx,incx,offy,incy])
Creating wrapper for Fortran function "zdotu"("wzdotu ")...
Constructing wrapper function "zdotu"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = zdotu(x,y,[n,offx,incx,offy,incy])
Creating wrapper for Fortran function "cdotc"("wcdotc ")...
Constructing wrapper function "cdotc"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = cdotc(x,y,[n,offx,incx,offy,incy])
Creating wrapper for Fortran function "zdotc"("wzdotc ")...
Constructing wrapper function "zdotc"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = zdotc(x,y,[n,offx,incx,offy,incy])
Creating wrapper for Fortran function "snrm2"("wsnrm2 ")...
Constructing wrapper function "snrm2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
n2 = snrm2(x,[n,offx,incx])
Creating wrapper for Fortran function "scnrm2"("wscnrm2 ")...
Constructing wrapper function "scnrm2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
n2 = scnrm2(x,[n,offx,incx])
Creating wrapper for Fortran function "dnrm2"("dnrm2")...
Constructing wrapper function "dnrm2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
n2 = dnrm2(x,[n,offx,incx])
Creating wrapper for Fortran function "dznrm2"("dznrm2")...
Constructing wrapper function "dznrm2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
n2 = dznrm2(x,[n,offx,incx])
Creating wrapper for Fortran function "sasum"("wsasum ")...
Constructing wrapper function "sasum"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
s = sasum(x,[n,offx,incx])
Creating wrapper for Fortran function "scasum"("wscasum ")...
Constructing wrapper function "scasum"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
s = scasum(x,[n,offx,incx])
Creating wrapper for Fortran function "dasum"("dasum")...
Constructing wrapper function "dasum"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
s = dasum(x,[n,offx,incx])
Creating wrapper for Fortran function "dzasum"("dzasum")...
Constructing wrapper function "dzasum"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
s = dzasum(x,[n,offx,incx])
Constructing wrapper function "isamax"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
k = isamax(x,[n,offx,incx])
Constructing wrapper function "idamax"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
k = idamax(x,[n,offx,incx])
Constructing wrapper function "icamax"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
k = icamax(x,[n,offx,incx])
Constructing wrapper function "izamax"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
k = izamax(x,[n,offx,incx])
Constructing wrapper function "sgemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = sgemv(alpha,a,x,[beta,y,offx,incx,offy,incy,trans,overwrite_y])
Constructing wrapper function "dgemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dgemv(alpha,a,x,[beta,y,offx,incx,offy,incy,trans,overwrite_y])
Constructing wrapper function "cgemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = cgemv(alpha,a,x,[beta,y,offx,incx,offy,incy,trans,overwrite_y])
Constructing wrapper function "zgemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = zgemv(alpha,a,x,[beta,y,offx,incx,offy,incy,trans,overwrite_y])
Constructing wrapper function "sgbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = sgbmv(m,n,kl,ku,alpha,a,x,[incx,offx,beta,y,incy,offy,trans,overwrite_y])
Constructing wrapper function "dgbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = dgbmv(m,n,kl,ku,alpha,a,x,[incx,offx,beta,y,incy,offy,trans,overwrite_y])
Constructing wrapper function "cgbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = cgbmv(m,n,kl,ku,alpha,a,x,[incx,offx,beta,y,incy,offy,trans,overwrite_y])
Constructing wrapper function "zgbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = zgbmv(m,n,kl,ku,alpha,a,x,[incx,offx,beta,y,incy,offy,trans,overwrite_y])
Constructing wrapper function "ssbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = ssbmv(k,alpha,a,x,[incx,offx,beta,y,incy,offy,lower,overwrite_y])
Constructing wrapper function "dsbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = dsbmv(k,alpha,a,x,[incx,offx,beta,y,incy,offy,lower,overwrite_y])
Constructing wrapper function "chbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = chbmv(k,alpha,a,x,[incx,offx,beta,y,incy,offy,lower,overwrite_y])
Constructing wrapper function "zhbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = zhbmv(k,alpha,a,x,[incx,offx,beta,y,incy,offy,lower,overwrite_y])
Constructing wrapper function "sspmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = sspmv(n,alpha,ap,x,[incx,offx,beta,y,incy,offy,lower,overwrite_y])
Constructing wrapper function "dspmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = dspmv(n,alpha,ap,x,[incx,offx,beta,y,incy,offy,lower,overwrite_y])
Constructing wrapper function "cspmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = cspmv(n,alpha,ap,x,[incx,offx,beta,y,incy,offy,lower,overwrite_y])
Constructing wrapper function "zspmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = zspmv(n,alpha,ap,x,[incx,offx,beta,y,incy,offy,lower,overwrite_y])
Constructing wrapper function "chpmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = chpmv(n,alpha,ap,x,[incx,offx,beta,y,incy,offy,lower,overwrite_y])
Constructing wrapper function "zhpmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
yout = zhpmv(n,alpha,ap,x,[incx,offx,beta,y,incy,offy,lower,overwrite_y])
Constructing wrapper function "ssymv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ssymv(alpha,a,x,[beta,y,offx,incx,offy,incy,lower,overwrite_y])
Constructing wrapper function "dsymv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dsymv(alpha,a,x,[beta,y,offx,incx,offy,incy,lower,overwrite_y])
Constructing wrapper function "chemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = chemv(alpha,a,x,[beta,y,offx,incx,offy,incy,lower,overwrite_y])
Constructing wrapper function "zhemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = zhemv(alpha,a,x,[beta,y,offx,incx,offy,incy,lower,overwrite_y])
Constructing wrapper function "sger"...
a = sger(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "dger"...
a = dger(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "cgeru"...
a = cgeru(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "zgeru"...
a = zgeru(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "cgerc"...
a = cgerc(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "zgerc"...
a = zgerc(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "ssyr"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = ssyr(alpha,x,[lower,incx,offx,n,a,overwrite_a])
Constructing wrapper function "dsyr"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = dsyr(alpha,x,[lower,incx,offx,n,a,overwrite_a])
Constructing wrapper function "csyr"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = csyr(alpha,x,[lower,incx,offx,n,a,overwrite_a])
Constructing wrapper function "zsyr"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = zsyr(alpha,x,[lower,incx,offx,n,a,overwrite_a])
Constructing wrapper function "cher"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = cher(alpha,x,[lower,incx,offx,n,a,overwrite_a])
Constructing wrapper function "zher"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = zher(alpha,x,[lower,incx,offx,n,a,overwrite_a])
Constructing wrapper function "ssyr2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = ssyr2(alpha,x,y,[lower,incx,offx,incy,offy,n,a,overwrite_a])
Constructing wrapper function "dsyr2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = dsyr2(alpha,x,y,[lower,incx,offx,incy,offy,n,a,overwrite_a])
Constructing wrapper function "cher2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = cher2(alpha,x,y,[lower,incx,offx,incy,offy,n,a,overwrite_a])
Constructing wrapper function "zher2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = zher2(alpha,x,y,[lower,incx,offx,incy,offy,n,a,overwrite_a])
Constructing wrapper function "sspr"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
apu = sspr(n,alpha,x,ap,[incx,offx,lower,overwrite_ap])
Constructing wrapper function "dspr"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
apu = dspr(n,alpha,x,ap,[incx,offx,lower,overwrite_ap])
Constructing wrapper function "cspr"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
apu = cspr(n,alpha,x,ap,[incx,offx,lower,overwrite_ap])
Constructing wrapper function "zspr"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
apu = zspr(n,alpha,x,ap,[incx,offx,lower,overwrite_ap])
Constructing wrapper function "chpr"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
apu = chpr(n,alpha,x,ap,[incx,offx,lower,overwrite_ap])
Constructing wrapper function "zhpr"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
apu = zhpr(n,alpha,x,ap,[incx,offx,lower,overwrite_ap])
Constructing wrapper function "sspr2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
apu = sspr2(n,alpha,x,y,ap,[incx,offx,incy,offy,lower,overwrite_ap])
Constructing wrapper function "dspr2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
apu = dspr2(n,alpha,x,y,ap,[incx,offx,incy,offy,lower,overwrite_ap])
Constructing wrapper function "chpr2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
apu = chpr2(n,alpha,x,y,ap,[incx,offx,incy,offy,lower,overwrite_ap])
Constructing wrapper function "zhpr2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
apu = zhpr2(n,alpha,x,y,ap,[incx,offx,incy,offy,lower,overwrite_ap])
Constructing wrapper function "stbsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = stbsv(k,a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "dtbsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = dtbsv(k,a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ctbsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = ctbsv(k,a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ztbsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = ztbsv(k,a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "stpsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = stpsv(n,ap,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "dtpsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = dtpsv(n,ap,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ctpsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = ctpsv(n,ap,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ztpsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = ztpsv(n,ap,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "strmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = strmv(a,x,[offx,incx,lower,trans,diag,overwrite_x])
Constructing wrapper function "dtrmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = dtrmv(a,x,[offx,incx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ctrmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = ctrmv(a,x,[offx,incx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ztrmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = ztrmv(a,x,[offx,incx,lower,trans,diag,overwrite_x])
Constructing wrapper function "strsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = strsv(a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "dtrsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = dtrsv(a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ctrsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = ctrsv(a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ztrsv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = ztrsv(a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "stbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = stbmv(k,a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "dtbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = dtbmv(k,a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ctbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = ctbmv(k,a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ztbmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = ztbmv(k,a,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "stpmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = stpmv(n,ap,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "dtpmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = dtpmv(n,ap,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ctpmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = ctpmv(n,ap,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "ztpmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xout = ztpmv(n,ap,x,[incx,offx,lower,trans,diag,overwrite_x])
Constructing wrapper function "sgemm"...
c = sgemm(alpha,a,b,[beta,c,trans_a,trans_b,overwrite_c])
Constructing wrapper function "dgemm"...
c = dgemm(alpha,a,b,[beta,c,trans_a,trans_b,overwrite_c])
Constructing wrapper function "cgemm"...
c = cgemm(alpha,a,b,[beta,c,trans_a,trans_b,overwrite_c])
Constructing wrapper function "zgemm"...
c = zgemm(alpha,a,b,[beta,c,trans_a,trans_b,overwrite_c])
Constructing wrapper function "ssymm"...
c = ssymm(alpha,a,b,[beta,c,side,lower,overwrite_c])
Constructing wrapper function "dsymm"...
c = dsymm(alpha,a,b,[beta,c,side,lower,overwrite_c])
Constructing wrapper function "csymm"...
c = csymm(alpha,a,b,[beta,c,side,lower,overwrite_c])
Constructing wrapper function "zsymm"...
c = zsymm(alpha,a,b,[beta,c,side,lower,overwrite_c])
Constructing wrapper function "chemm"...
c = chemm(alpha,a,b,[beta,c,side,lower,overwrite_c])
Constructing wrapper function "zhemm"...
c = zhemm(alpha,a,b,[beta,c,side,lower,overwrite_c])
Constructing wrapper function "ssyrk"...
c = ssyrk(alpha,a,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "dsyrk"...
c = dsyrk(alpha,a,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "csyrk"...
c = csyrk(alpha,a,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "zsyrk"...
c = zsyrk(alpha,a,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "cherk"...
c = cherk(alpha,a,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "zherk"...
c = zherk(alpha,a,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "ssyr2k"...
c = ssyr2k(alpha,a,b,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "dsyr2k"...
c = dsyr2k(alpha,a,b,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "csyr2k"...
c = csyr2k(alpha,a,b,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "zsyr2k"...
c = zsyr2k(alpha,a,b,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "cher2k"...
c = cher2k(alpha,a,b,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "zher2k"...
c = zher2k(alpha,a,b,[beta,c,trans,lower,overwrite_c])
Constructing wrapper function "strmm"...
b = strmm(alpha,a,b,[side,lower,trans_a,diag,overwrite_b])
Constructing wrapper function "dtrmm"...
b = dtrmm(alpha,a,b,[side,lower,trans_a,diag,overwrite_b])
Constructing wrapper function "ctrmm"...
b = ctrmm(alpha,a,b,[side,lower,trans_a,diag,overwrite_b])
Constructing wrapper function "ztrmm"...
b = ztrmm(alpha,a,b,[side,lower,trans_a,diag,overwrite_b])
Constructing wrapper function "strsm"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = strsm(alpha,a,b,[side,lower,trans_a,diag,overwrite_b])
Constructing wrapper function "dtrsm"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = dtrsm(alpha,a,b,[side,lower,trans_a,diag,overwrite_b])
Constructing wrapper function "ctrsm"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = ctrsm(alpha,a,b,[side,lower,trans_a,diag,overwrite_b])
Constructing wrapper function "ztrsm"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = ztrsm(alpha,a,b,[side,lower,trans_a,diag,overwrite_b])
Wrote C/API module "_fblas" to file "build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg/_fblasmodule.c"
Fortran 77 wrappers are saved to "build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg/_fblas-f2pywrappers.f"
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg' to include_dirs.
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/build
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy
creating build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg
copying /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg
copying /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg/_fblas-f2pywrappers.f' to sources.
building extension "scipy.linalg._flapack" sources
from_template:> build/src.linux-x86_64-3.7/scipy/linalg/flapack.pyf
Including file scipy/linalg/flapack_user.pyf.src
f2py options: []
f2py: build/src.linux-x86_64-3.7/scipy/linalg/flapack.pyf
Reading fortran codes...
Reading file 'build/src.linux-x86_64-3.7/scipy/linalg/flapack.pyf' (format:free)
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/tmp/pip-install-z9bzmes8/scipy/setup.py", line 418, in <module>
setup_package()
File "/tmp/pip-install-z9bzmes8/scipy/setup.py", line 414, in setup_package
setup(**metadata)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/core.py", line 171, in setup
return old_setup(**new_attr)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/setuptools/__init__.py", line 145, in setup
return distutils.core.setup(**attrs)
File "/usr/lib/python3.7/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.7/distutils/dist.py", line 966, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/wheel/bdist_wheel.py", line 223, in run
self.run_command('build')
File "/usr/lib/python3.7/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/build.py", line 47, in run
old_build.run(self)
File "/usr/lib/python3.7/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/usr/lib/python3.7/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/build_src.py", line 142, in run
self.build_sources()
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/build_src.py", line 159, in build_sources
self.build_extension_sources(ext)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/build_src.py", line 319, in build_extension_sources
sources = self.f2py_sources(sources, ext)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/build_src.py", line 535, in f2py_sources
+ ['--build-dir', target_dir, source])
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/f2py2e.py", line 425, in run_main
postlist = callcrackfortran(files, options)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/f2py2e.py", line 330, in callcrackfortran
postlist = crackfortran.crackfortran(files)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 3251, in crackfortran
readfortrancode(files, crackline)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 501, in readfortrancode
dowithline(finalline)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 796, in crackline
analyzeline(m, pat[1], line)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 1098, in analyzeline
last_name = updatevars(typespec, selector, attr, edecl)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 1542, in updatevars
attrspec = [x.strip() for x in markoutercomma(attrspec).split('@,@')]
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 833, in markoutercomma
assert not f, repr((f, line, l))
AssertionError: (-1, 'intent(in))', 'intent(in))')
----------------------------------------
ERROR: Failed building wheel for scipy
Running setup.py clean for scipy
ERROR: Command errored out with exit status 1:
command: /home/ubuntu/jupyter_notebooks/.env/bin/python3.7 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-z9bzmes8/scipy/setup.py'"'"'; __file__='"'"'/tmp/pip-install-z9bzmes8/scipy/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
cwd: /tmp/pip-install-z9bzmes8/scipy
Complete output (9 lines):
`setup.py clean` is not supported, use one of the following instead:
- `git clean -xdf` (cleans all files)
- `git clean -Xdf` (cleans all versioned files, doesn't touch
files that aren't checked into the git repo)
Add `--force` to your command to use it anyway if you must (unsupported).
----------------------------------------
ERROR: Failed cleaning build dir for scipy
Failed to build scipy
Installing collected packages: scipy, resampy, scikit-learn, librosa, tensorboardX, Unidecode, pillow, nltk, jamo, music21
Found existing installation: scipy 1.4.1
Uninstalling scipy-1.4.1:
Successfully uninstalled scipy-1.4.1
Running setup.py install for scipy ... error
ERROR: Command errored out with exit status 1:
command: /home/ubuntu/jupyter_notebooks/.env/bin/python3.7 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-z9bzmes8/scipy/setup.py'"'"'; __file__='"'"'/tmp/pip-install-z9bzmes8/scipy/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-5z5xs0bz/install-record.txt --single-version-externally-managed --compile --install-headers /home/ubuntu/jupyter_notebooks/.env/include/site/python3.7/scipy
cwd: /tmp/pip-install-z9bzmes8/scipy/
Complete output (406 lines):
Note: if you need reliable uninstall behavior, then install
with pip instead of using `setup.py install`:
- `pip install .` (from a git repo or downloaded source
release)
- `pip install scipy` (last SciPy release on PyPI)
lapack_opt_info:
lapack_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_lapack_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas,lapack not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
flame_info:
customize UnixCCompiler
libraries flame not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries lapack_atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries tatlas,tatlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
customize UnixCCompiler
libraries lapack_atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries satlas,satlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries satlas,satlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries satlas,satlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
customize UnixCCompiler
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries lapack_atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
customize UnixCCompiler
libraries lapack_atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /home/ubuntu/jupyter_notebooks/.env/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu/atlas
customize UnixCCompiler
customize UnixCCompiler
customize UnixCCompiler
<class 'numpy.distutils.system_info.atlas_info'>
customize UnixCCompiler
get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']'
customize Gnu95FCompiler
Could not locate executable gfortran
Could not locate executable f95
customize IntelFCompiler
Could not locate executable ifort
Could not locate executable ifc
customize LaheyFCompiler
Could not locate executable lf95
customize PGroupFCompiler
Could not locate executable pgfortran
customize AbsoftFCompiler
Could not locate executable f90
Could not locate executable f77
customize NAGFCompiler
customize VastFCompiler
customize CompaqFCompiler
Could not locate executable fort
customize IntelItaniumFCompiler
Could not locate executable efort
Could not locate executable efc
customize IntelEM64TFCompiler
customize GnuFCompiler
Could not locate executable g77
customize G95FCompiler
Could not locate executable g95
customize PathScaleFCompiler
Could not locate executable pathf95
customize NAGFORCompiler
Could not locate executable nagfor
don't know how to compile Fortran code on platform 'posix'
compiling '_configtest.c':
/* This file is generated from numpy/distutils/system_info.py */
void ATL_buildinfo(void);
int main(void) {
ATL_buildinfo();
return 0;
}
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fdebug-prefix-map=/build/python3.7-WA8NgD/python3.7-3.7.6=. -fstack-protector-strong -Wformat -Werror=format-security -g -fdebug-prefix-map=/build/python3.7-WA8NgD/python3.7-3.7.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-c'
x86_64-linux-gnu-gcc: _configtest.c
x86_64-linux-gnu-gcc -pthread _configtest.o -lf77blas -lcblas -latlas -o _configtest
customize UnixCCompiler
customize UnixCCompiler
FOUND:
language = f77
libraries = ['lapack', 'f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
define_macros = [('NO_ATLAS_INFO', -1)]
FOUND:
language = f77
libraries = ['lapack', 'f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
define_macros = [('NO_ATLAS_INFO', -1)]
Running from scipy source directory.
Splitting linalg.interpolative Fortran source files
/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/system_info.py:782: UserWarning: Specified path /home/ubuntu/jupyter_notebooks/.env/include/python3.7m is invalid.
return self.get_paths(self.section, key)
/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/system_info.py:782: UserWarning: Specified path /usr/local/include/python3.7m is invalid.
return self.get_paths(self.section, key)
blas_opt_info:
blas_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
customize UnixCCompiler
libraries blis not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries tatlas not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
customize UnixCCompiler
libraries satlas not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in ['/home/ubuntu/jupyter_notebooks/.env/lib', '/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
customize UnixCCompiler
compiling '_configtest.c':
/* This file is generated from numpy/distutils/system_info.py */
void ATL_buildinfo(void);
int main(void) {
ATL_buildinfo();
return 0;
}
C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fdebug-prefix-map=/build/python3.7-WA8NgD/python3.7-3.7.6=. -fstack-protector-strong -Wformat -Werror=format-security -g -fdebug-prefix-map=/build/python3.7-WA8NgD/python3.7-3.7.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-c'
x86_64-linux-gnu-gcc: _configtest.c
x86_64-linux-gnu-gcc -pthread _configtest.o -lf77blas -lcblas -latlas -o _configtest
customize UnixCCompiler
customize UnixCCompiler
FOUND:
language = c
define_macros = [('HAVE_CBLAS', None), ('NO_ATLAS_INFO', -1)]
libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
FOUND:
language = c
define_macros = [('HAVE_CBLAS', None), ('NO_ATLAS_INFO', -1)]
libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
non-existing path in 'scipy/sparse': 'sparsetools/sparsetools_impl.h'
non-existing path in 'scipy/sparse': 'sparsetools/bsr_impl.h'
non-existing path in 'scipy/sparse': 'sparsetools/csc_impl.h'
non-existing path in 'scipy/sparse': 'sparsetools/csr_impl.h'
non-existing path in 'scipy/sparse': 'sparsetools/other_impl.h'
running install
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
building library "dfftpack" sources
building library "fftpack" sources
building library "mach" sources
building library "quadpack" sources
building library "lsoda" sources
building library "vode" sources
building library "dop" sources
building library "fitpack" sources
building library "fwrappers" sources
building library "odrpack" sources
building library "minpack" sources
building library "rootfind" sources
building library "superlu_src" sources
building library "arpack_scipy" sources
building library "sc_c_misc" sources
building library "sc_cephes" sources
building library "sc_mach" sources
building library "sc_amos" sources
building library "sc_cdf" sources
building library "sc_specfun" sources
building library "statlib" sources
building extension "scipy.cluster._vq" sources
building extension "scipy.cluster._hierarchy" sources
building extension "scipy.cluster._optimal_leaf_ordering" sources
building extension "scipy.fftpack._fftpack" sources
f2py options: []
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack' to include_dirs.
building extension "scipy.fftpack.convolve" sources
f2py options: []
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/fftpack' to include_dirs.
building extension "scipy.integrate._quadpack" sources
building extension "scipy.integrate._odepack" sources
building extension "scipy.integrate.vode" sources
f2py options: []
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate' to include_dirs.
building extension "scipy.integrate.lsoda" sources
f2py options: []
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate' to include_dirs.
building extension "scipy.integrate._dop" sources
f2py options: []
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate' to include_dirs.
building extension "scipy.integrate._test_multivariate" sources
building extension "scipy.integrate._test_odeint_banded" sources
f2py options: []
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/integrate' to include_dirs.
adding 'build/src.linux-x86_64-3.7/scipy/integrate/_test_odeint_banded-f2pywrappers.f' to sources.
building extension "scipy.interpolate.interpnd" sources
building extension "scipy.interpolate._ppoly" sources
building extension "scipy.interpolate._bspl" sources
building extension "scipy.interpolate._fitpack" sources
building extension "scipy.interpolate.dfitpack" sources
f2py options: []
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/interpolate/src/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/interpolate/src' to include_dirs.
adding 'build/src.linux-x86_64-3.7/scipy/interpolate/src/dfitpack-f2pywrappers.f' to sources.
building extension "scipy.interpolate._interpolate" sources
building extension "scipy.io._test_fortran" sources
f2py options: []
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/io/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/io' to include_dirs.
building extension "scipy.io.matlab.streams" sources
building extension "scipy.io.matlab.mio_utils" sources
building extension "scipy.io.matlab.mio5_utils" sources
building extension "scipy.linalg._fblas" sources
f2py options: []
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg/fortranobject.c' to sources.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg' to include_dirs.
adding 'build/src.linux-x86_64-3.7/build/src.linux-x86_64-3.7/scipy/linalg/_fblas-f2pywrappers.f' to sources.
building extension "scipy.linalg._flapack" sources
f2py options: []
f2py: build/src.linux-x86_64-3.7/scipy/linalg/flapack.pyf
Reading fortran codes...
Reading file 'build/src.linux-x86_64-3.7/scipy/linalg/flapack.pyf' (format:free)
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/tmp/pip-install-z9bzmes8/scipy/setup.py", line 418, in <module>
setup_package()
File "/tmp/pip-install-z9bzmes8/scipy/setup.py", line 414, in setup_package
setup(**metadata)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/core.py", line 171, in setup
return old_setup(**new_attr)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/setuptools/__init__.py", line 145, in setup
return distutils.core.setup(**attrs)
File "/usr/lib/python3.7/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.7/distutils/dist.py", line 966, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/install.py", line 62, in run
r = self.setuptools_run()
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/install.py", line 36, in setuptools_run
return distutils_install.run(self)
File "/usr/lib/python3.7/distutils/command/install.py", line 589, in run
self.run_command('build')
File "/usr/lib/python3.7/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/build.py", line 47, in run
old_build.run(self)
File "/usr/lib/python3.7/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/usr/lib/python3.7/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/build_src.py", line 142, in run
self.build_sources()
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/build_src.py", line 159, in build_sources
self.build_extension_sources(ext)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/build_src.py", line 319, in build_extension_sources
sources = self.f2py_sources(sources, ext)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/distutils/command/build_src.py", line 535, in f2py_sources
+ ['--build-dir', target_dir, source])
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/f2py2e.py", line 425, in run_main
postlist = callcrackfortran(files, options)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/f2py2e.py", line 330, in callcrackfortran
postlist = crackfortran.crackfortran(files)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 3251, in crackfortran
readfortrancode(files, crackline)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 501, in readfortrancode
dowithline(finalline)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 796, in crackline
analyzeline(m, pat[1], line)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 1098, in analyzeline
last_name = updatevars(typespec, selector, attr, edecl)
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 1542, in updatevars
attrspec = [x.strip() for x in markoutercomma(attrspec).split('@,@')]
File "/home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/numpy/f2py/crackfortran.py", line 833, in markoutercomma
assert not f, repr((f, line, l))
AssertionError: (-1, 'intent(in))', 'intent(in))')
----------------------------------------
Rolling back uninstall of scipy
Moving to /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/scipy-1.4.1.dist-info/
from /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/~cipy-1.4.1.dist-info
Moving to /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/scipy/
from /home/ubuntu/jupyter_notebooks/.env/lib/python3.7/site-packages/~cipy
ERROR: Command errored out with exit status 1: /home/ubuntu/jupyter_notebooks/.env/bin/python3.7 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-z9bzmes8/scipy/setup.py'"'"'; __file__='"'"'/tmp/pip-install-z9bzmes8/scipy/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-5z5xs0bz/install-record.txt --single-version-externally-managed --compile --install-headers /home/ubuntu/jupyter_notebooks/.env/include/site/python3.7/scipy Check the logs for full command output.
WARNING: You are using pip version 19.2.3, however version 20.0.2 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
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