lynnlangit

Dec 2020 Links

Here's a list of Links

Day 1

Intro

• Google Cloud console --> https://console.cloud.google.com/
• GCP-for-Bioinformatics --> https://github.com/lynnlangit/gcp-for-bioinformatics

zrruziev

What is NUMA (Non-Uniformed Memory Access)

Non-Uniform Memory Access (NUMA) is one of the computer memory design methods used in multiprocessor systems, and the time to access the memory varies depending on the relative position between the memory and the processor. In the NUMA architecture, when a processor accesses its local memory, it is faster than when it accesses the remote memory. Remote memory refers to memory that is connected to another processor, and local memory refers to memory that is connected to its own processor. In other words, it is a technology to increase memory access efficiency while using multiple processors on one motherboard. When a specific processor runs out of memory, it monopolizes the bus by itself, so other processors have to play. , and designate 'access only here', and call it a NUMA node.

1. Check Nodes

lspci | grep -i nvidia
  
01:00.0 VGA compatible controller: NVIDIA Corporation TU106 [GeForce RTX 2060 12GB] (rev a1)

Roboronnie

miniwdl run vcf_chrom_count.wdl \
  vcf_gz=https://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/release/NA12878_HG001/latest/GRCh38/HG001_GRCh38_GIAB_highconf_CG-IllFB-IllGATKHC-Ion-10X-SOLID_CHROM1-X_v.3.3.2_highconf_PGandRTGphasetransfer.vcf.gz \
  tbi=https://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/release/NA12878_HG001/latest/GRCh38/HG001_GRCh38_GIAB_highconf_CG-IllFB-IllGATKHC-Ion-10X-SOLID_CHROM1-X_v.3.3.2_highconf_PGandRTGphasetransfer.vcf.gz.tbi \
  --verbose

Aaronontheweb

Building Your First Whiskey Collection

I got really into Scotch when I turned 30 years old and took a father-son trip through England and Scotland. Since then it's been one of my favorite hobbies and I've built a great collection over the past few years that I enjoy sharing with my friends and family.

A lot of the people in my circle have expressed interest in learning whiskey and how to build their own collection - so I put this together as a short guide to help explain how to build a tasty, diverse, and affordable "Starter Whiskey Collection." Enjoy!

A Beginner's Palette

Tasting whiskey or any hard liquor can be a challenge at first, because the alcohol flavor overwhelms the sugars, esters, and other residues from the fermentation and aging process. We want to be able to taste the stuff in the latter category without being perturbed by the former.

This guide is designed to help steer readers towards whiskeys that are easy to drink: ones with a naturally sweet or slightly berry flavor. As you start

scottfrazer

"My First WDL" Template

task name {
  String in
  command {
    echo '${in}'
  }
  output {
 String out = read_string(stdout())

chenzhan

# List all tables:
select db_id, id, name, sum(rows) as mysum 
from stv_tbl_perm where db_id = 100546 
group by db_id, id, name order by mysum desc;

# list all running processes:
select pid, query from stv_recents where status = 'Running';

# describe table
select * from PG_TABLE_DEF where tablename='audit_trail';

tsiege

ANNOUNCEMENT

I have moved this over to the Tech Interview Cheat Sheet Repo and has been expanded and even has code challenges you can run and practice against!






\

wsargent

303 See Other

Location: https://github.com/wsargent/docker-cheat-sheet

Hi there!

The docker cheat sheet has moved to a Github project under https://github.com/wsargent/docker-cheat-sheet.

Please click on the link above to go to the cheat sheet.

campeterson

Aviation

National Flight Data Center (NFDC)

https://nfdc.faa.gov/xwiki/bin/view/NFDC/WebHome

FAA Data & Research

http://www.faa.gov/data_research/

Flight Delay Information

http://www.fly.faa.gov/flyfaa/usmap.jsp