normcyr

/*** ^^A -*-C++-*- **********************************************/
/*      splitser3d              15.08.1990                      */
/****************************************************************/
/*      Short Description :                                     */
/*      Program which splits a pseudo 3D ser file into single   */
/*      fids starting with the expno which follows the ser file.*/
/****************************************************************/
/*      Keywords :                                              */
/*      splitser                                                */
/****************************************************************/

normcyr

#!/usr/bin/env python3
# -*- coding: utf-8 -*-

from bs4 import BeautifulSoup
import requests


def charger_donnees(url_source):

    '''

normcyr

#!/bin/bash
# ------------------------------------------------------------------
# [Normand Cyr] tar_data.sh
#   Create a GZIP compressed file containing SAXS data of a user
# ------------------------------------------------------------------

VERSION=0.1.0
#USAGE="Usage: tar_data -ihv args"

# name of the data file to create

normcyr

'''
Script to analyze, plot and fit fluorescence anisotropy data
Data file can be foudn here:
https://www.normandcyr.com/data/data.csv
'''

import pandas as pd
import matplotlib.pyplot as plt
from scipy import optimize
from math import sqrt

normcyr

Getting Started

Do yourself a favor and login as root to save yourself some time and headaches:

$ sudo su -

Install unattended-upgrades:

normcyr

#Largely inspired from Oli's Coot customizations. Thanks Oliver!
#https://github.com/olibclarke/coot-trimmings
#
#A few modifications to suit my preference.
#
#Usage: Copy to ~/.coot-preferences
#When Coot is restarted, a new "Custom" menu will appear, with some new shortcuts for various model-building tasks.
#Also there will be a bunch of new keyboard shortcuts - check "Extensions...Settings...Key bindings" for details.

#****Settings****

normcyr

#!/bin/sh
# script to launch coot and automatically open the latest PDB and MTZ files
# modified slightly from jpxtal (https://github.com/jpxtal/easypx)

unset GTK_IM_MODULE

pdb=$(ls -t *.pdb | head -1)
mtz=$(ls -t *.mtz | head -1)

echo coot --pdb $pdb --auto $mtz

normcyr

from pypdb import *

#testPdb = '4xkl'
#testPdb = '5v4k'
testPdb = '3vtv'
entityExtraInfo = get_all_info(testPdb)

print(entityExtraInfo)
print('\n')

normcyr

#!/bin/sh
#
# usage: ./reddit-rss-feeder.sh subreddit-name hot/new/rising/controversial/top/gilded
#   default subreddit-name = popular
#   default tab = hot
# e.g.: ./reddit-rss-feeder.sh bikewrench new
#
# This script uses rsstail to retrieve latests entries from Reddit Bikecommuting rss feed
# and process them through awk. Each update shows a timestamp separator.
#

normcyr

# ~/.bashrc: executed by bash(1) for non-login shells.
# see /usr/share/doc/bash/examples/startup-files (in the package bash-doc)
# for examples

# If not running interactively, don't do anything
[ -z "$PS1" ] && return

# don't put duplicate lines in the history. See bash(1) for more options
# ... or force ignoredups and ignorespace
HISTCONTROL=ignoredups:ignorespace