Peter McHale petermchale
petermchale
/ database.ipynb
Last active
November 20, 2023 00:07
How to organize the tables of a database, and how to query the database using python (sqlite3)
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petermchale
/ gist:147f9ddfe67216b0275aa72f08365472
Created
July 25, 2023 03:45
How to compute protein LLM embeddings and predict variant effects
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| https://colab.research.google.com/drive/1rNMGAN-5PZLfQiBpMQLn5YNxi2-Zq6bB?usp=sharing |
petermchale
/ females tend to smile more than males.ipynb
Created
January 21, 2023 19:22
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petermchale
/ estimator-of-log-odds-ratio-is-normally-distributed.ipynb
Created
October 11, 2022 23:55
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petermchale
/ germline-model.ipynb
Created
October 2, 2022 21:28
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petermchale
/ neutral-expectations-for-sperm-vs-epidermis-allele-frequency-spectra.ipynb
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October 20, 2022 00:20
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petermchale
/ Gaussian_Naive_Bayes.ipynb
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October 5, 2022 22:57
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petermchale
/ likelihood-ratio-test-from-first-principles.ipynb
Created
August 30, 2022 23:05
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petermchale
/ promoter-constraint-does-not-predict-gene-constraint.ipynb
Created
June 17, 2022 20:20
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petermchale
/ finding_tandem-repeats_enriched_in_pacbio-calls.ipynb
Last active
June 16, 2022 20:14
Using a decision tree to predict polymorphism at tandem repeat regions of the human genome
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