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git fetch
git merge origin/main

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git config --local commit.gpgsign false

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$result = curl "https://api.github.com/search/code?q=healthcare+repo%3AMicrosoftDocs%2Farchitecture-center+language%3AMarkdown+path%3Adocs&type=Code&page=1" | convertfrom-json
$result.items | format-table name, path

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$spnName = Read-Host -Prompt "Enter new FHIR SPN name"
$subId = Read-Host -Prompt "Enter Azure Subscription Id"
$rgName = Read-Host -Prompt "Enter resource group name of FHIR API"
$fhirName = Read-Host -Prompt "Enter name of FHIR API resource (i.e. myfhirapi)"

az login
$spn = az ad sp create-for-rbac -n $spnName | convertfrom-json

az role assignment create --role "FHIR Data Reader" --assignee $spn.appId `
  --scope "/subscriptions/$subId/resourceGroups/$rgName/providers/Microsoft.HealthcareApis/services/$fhirName"

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Azure Function Resource links

Tools

• VS Code
• Azure Function Extension
• Azure Function Core Tools
• Azure Storage Explorer

Docs

• Azure Functions Overview

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az login
az account get-access-token `
-t c2c1d092-cf24-4636-a284-203c93601579 `
--scope api://f0e9be33-2224-430d-a7b7-6e6c1ab69a29/.default

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$subscriptionId = "<azure subscription id>"
Connect-AzAccount -SubscriptionId $subscriptionId

$users = Import-Csv ./userlist.csv

foreach ($user in $users) {
    $user   
    $g = Get-AzResourceGroup -Name $user.AzureGroup -ErrorVariable notFound -ErrorAction SilentlyContinue
    if ($notFound) {
        $g = New-AzResourceGroup -Name $user.AzureGroup -Location "Central US"

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$appId = "04b07795-8ddb-461a-bbee-02f9e1bf7b46" #global appId for az CLI
$apiId = "5d6db6cd-cce5-47c4-8700-000efa22e068" #appId of your custom API
$requestScope = "api://localhost/5d6db6cd-cce5-47c4-8700-000efa22e068/.default" #scope exposed by your custom API app registration

## First time only
az login
az ad sp create --id $appId
az ad app permission grant --id $appId --api $apiId --scope "access_as_user"

## Get new token

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Oh NO! I accidentally committed a secret value to GitHub

Here is the procedure that works the best while being the least destructive

1. Open the repo using a new Codespace
2. Using the terminal, download BFG tool.

cd ..
curl https://repo1.maven.org/maven2/com/madgag/bfg/1.14.0/bfg-1.14.0.jar bfg.jar

3. IMPORTANT Clone a mirror of the repo (the git database only) so we don't mess with any local files

pjirsa

snippets

Useful code snippets for future reference

Azure Container Instances

Run nextflow-io/hello sample pipeline in ACI

az container create \
  --resource-group demo-aci \
  --name demo-aci \
 --image nextflow/nextflow:21.10.6 \