pjotrp

    case class Symbol() 
    case object Gap extends Symbol 
    case class Nucleotide() extends Symbol
    case object GapN extends Nucleotide 
    case object A extends Nucleotide
    case object G extends Nucleotide
    case object C extends Nucleotide
    case object T extends Nucleotide
    case object AnyGap
    def splitSimplePass6[T >: Symbol](seq: List[T]): List[List[T]] = {

pjotrp

    case class Symbol() 
    case object Gap extends Symbol 
    case class Nucleotide() extends Symbol
    case object GapN extends Nucleotide 
    case object A extends Nucleotide
    case object G extends Nucleotide
    case object C extends Nucleotide
    case object T extends Nucleotide

pjotrp

/**

The following example uses this function to calculate the matrix-vector product using 
a blas/lapack routine:

  / 3 1 3 \   / -1 \ 
  | 1 5 9 | * | -1 |. 
  \ 2 6 5 /   \  1 / 

D2 version based on the C version at http://www.seehuhn.de/pages/linear

pjotrp

/**

  A minimal example to use the random number generator of R (calling into Rlib.so from D)

  dmd test_rlib.d ; ./test_rlib

  It is a copy of the C code I wrote for BioLib

  Pjotr Prins, 2012

pjotrp

# Ruby script to convert Foxpro file to SQLite or MySQL
#

USE_SQLITE3 = false

require 'rubygems'
require 'dbf'
require 'active_record'

if USE_SQLITE3

pjotrp

L1 cache reference                  0.5 ns
Branch mispredict                   5 ns
L2 cache reference                  7 ns
Mutex lock/unlock                   25 ns
Main memory reference               100 ns
Compress 1K bytes with Zippy        3,000 ns
Send 2K bytes over 1 Gbps network   20,000 ns
Read 1 MB sequentially from memory  250,000 ns
Round trip within same datacenter   500,000 ns
Disk seek                           10,000,000 ns

pjotrp

(define-public mruby
  (package
    (name "mruby")
    (version "2.0.0")
    (source (origin
             (method url-fetch)
             (uri (string-append "https://github.com/mruby/mruby/archive/" version ".zip"))
             (sha256
              (base32

pjotrp

/gnu/store/ik2j18y8gd370ndinna725c2ikldyh0r-cwltool-1.0.20181012180214/bin/.cwltool-real 1.0
Resolved 'Workflows/test-workflow.cwl' to 'file:///gnu/export/local/home/wrk/izip/git/opensource/cwl/hacchy1983-CWL-workflows/Workflows/test-workflow.cwl'
[workflow ] start
[workflow ] starting step trimPE
[step trimPE] start
[job trimPE] /tmp/ypu930v1$ java \
    -jar \
    /gnu/store/f09s746mp061ric48gdb1xaav9ki0b7q-trimmomatic-jar-0.38/lib/share/jar/trimmomatic-0.38.jar \
    PE \
    /tmp/tmpt5_80dad/stg2b137de8-6a7f-4ff7-882b-69a5f0ab4d61/small.ERR034597_1.fastq \

pjotrp

### Keybase proof

I hereby claim:

  * I am pjotrp on github.
  * I am pjotrp (https://keybase.io/pjotrp) on keybase.
  * I have a public key ASD7kTur_ZppaDJ63LYDzsVXAxA096kY7-xaxy8oyPIn-wo

To claim this, I am signing this object:

pjotrp

#!/bin/bash

# Usage:   ./honeywell_settmp.sh [-c|-h|-o] [<temp(F)>|schedule]
# Example: ./honeywell_settmp.sh -h 72        # set HEAT: temp=72F
#          ./honeywell_settmp.sh -c schedule  # set COOL: follow shceduled temp
#          ./honeywell_settmp.sh -o           # turn system OFF

######## Settings ########
LOGIN="YOUR_MAIL_ADDRESS"
PASSWORD="YOUR_PASSWORD"